RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 IGHMBP2P38935 993 aaKnown RBP6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 TDO2P48775 406 aa6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 NT5C2P49902 561 aa6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 TOB1P50616 345 aaPredicted RBP6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 LMNB2Q03252 620 aa6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 PCDH1Q08174 1060 aa6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 FAAP100Q0VG06 881 aa6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 ELOA3BQ3SY89 546 aa6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 CCDC152Q4G0S7 254 aa6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 TRIM65Q6PJ69 517 aa6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 REXO1L1PQ8IX06 675 aa6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 STK11IPQ8N1F8 1099 aa6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 SYNE4Q8N205 404 aa6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 FANCBQ8NB91 859 aa6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 ELOA3Q8NG57 546 aa6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 SPATA20Q8TB22 786 aa6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 ZNF296Q8WUU4 475 aaPredicted RBP6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 DHX38Q92620 1227 aaKnown RBP6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 DPF2Q92785 391 aa6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 RHOVQ96L33 236 aa6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 CLIC6Q96NY7 704 aa6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 UTP14AQ9BVJ6 771 aaKnown RBP6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 NAA15Q9BXJ9 866 aaKnown RBP6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 EPB41L4AQ9HCS5 686 aaPredicted RBP6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 GNL3LQ9NVN8 582 aaKnown RBP6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 RBM28Q9NW13 759 aaKnown RBP6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 AATFQ9NY61 560 aaKnown RBP eCLIP6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 DNAI1Q9UI46 699 aa6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 SLC4A4Q9Y6R1 1079 aa6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 LRP6O75581 1613 aa6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 BCL9O00512 1426 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 SHANK3Q9BYB0 1731 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 TRIM75PA6NK02 468 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 EFCAB8A8MWE9 144 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 EXOC5O00471 708 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 POLR2DO15514 142 aaKnown RBP6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 EIF4EBP3O60516 100 aaPredicted RBP6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 STK10O94804 968 aaKnown RBP6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 PF4P02776 101 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 VSIG8P0DPA2 414 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 ATP1A3P13637 1013 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 RXRAP19793 462 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 CASQ1P31415 396 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 PLCD1P51178 756 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 EIF5P55010 431 aaKnown RBP6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 CAMK2GQ13555 558 aaPredicted RBP6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 RASGRF1Q13972 1273 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 GAS6Q14393 721 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 NR1I3Q14994 352 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 ELF2Q15723 593 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 SOGA3Q5TF21 947 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 PCNX4Q63HM2 1172 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 SPECC1LQ69YQ0 1117 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 ISM2Q6H9L7 571 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 FBXO38Q6PIJ6 1188 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 AGMOQ6ZNB7 445 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 GOLGA6L1Q8N7Z2 621 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 MNS1Q8NEH6 495 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 TTC9Q92623 222 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 ESR2Q92731 530 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 FERMT2Q96AC1 680 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 CCDC51Q96ER9 411 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 GSDMAQ96QA5 445 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 PANX2Q96RD6 677 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 CTAGE1Q96RT6 745 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 BAG1Q99933 345 aaPredicted RBP6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 LPIN3Q9BQK8 851 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 UBAC1Q9BSL1 405 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 NT5C1AQ9BXI3 368 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 LACRTQ9GZZ8 138 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 ADAM19Q9H013 955 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 ARMT1Q9H993 441 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 BRMS1Q9HCU9 246 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 PRDM10Q9NQV6 1147 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 KCNQ5Q9NR82 932 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 GDF2Q9UK05 429 aaPredicted RBP6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 NAGPAQ9UK23 515 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 DENND2AQ9ULE3 1009 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 SOX13Q9UN79 622 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 ZBTB1Q9Y2K1 713 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 NFE2L3Q9Y4A8 694 aa6.77□□□□□ -1.33
CHMP4A-210ENST00000552620 MYH3P11055 1940 aa6.76□□□□□ -1.33
CHMP4A-210ENST00000552620 AKR1B15C9JRZ8 316 aaPredicted RBP6.76□□□□□ -1.33
CHMP4A-210ENST00000552620 RGS9O75916 674 aaPredicted RBP6.76□□□□□ -1.33
CHMP4A-210ENST00000552620 B3GALT4O96024 378 aa6.76□□□□□ -1.33
CHMP4A-210ENST00000552620 SSBP05455 408 aaKnown RBP eCLIP6.76□□□□□ -1.33
CHMP4A-210ENST00000552620 FGRP09769 529 aa6.76□□□□□ -1.33
CHMP4A-210ENST00000552620 SLFN14P0C7P3 912 aa6.76□□□□□ -1.33
CHMP4A-210ENST00000552620 BMP6P22004 513 aa6.76□□□□□ -1.33
CHMP4A-210ENST00000552620 NME2P22392 152 aa6.76□□□□□ -1.33
CHMP4A-210ENST00000552620 GUCY1A2P33402 732 aa6.76□□□□□ -1.33
CHMP4A-210ENST00000552620 KRT2P35908 639 aa6.76□□□□□ -1.33
CHMP4A-210ENST00000552620 TRAPPC10P48553 1259 aa6.76□□□□□ -1.33
CHMP4A-210ENST00000552620 PDE4BQ07343 736 aa6.76□□□□□ -1.33
CHMP4A-210ENST00000552620 PPARAQ07869 468 aa6.76□□□□□ -1.33
CHMP4A-210ENST00000552620 COL9A2Q14055 689 aaPredicted RBP6.76□□□□□ -1.33
CHMP4A-210ENST00000552620 UBE4AQ14139 1066 aa6.76□□□□□ -1.33
CHMP4A-210ENST00000552620 LRRC14Q15048 493 aa6.76□□□□□ -1.33
CHMP4A-210ENST00000552620 SEC23AQ15436 765 aa6.76□□□□□ -1.33
CHMP4A-210ENST00000552620 FILIP1LQ4L180 1135 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms