RNA–Protein interactions for RNA: ENST00000552599.5

CNOT2-240, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 2,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-240ENST00000552599 MMP1P03956 469 aa8.31□□□□□ -1.08
CNOT2-240ENST00000552599 U2AF2P26368 475 aaKnown RBP eCLIP8.31□□□□□ -1.084e-9■□□□□ 9.3
CNOT2-240ENST00000552599 NR5A1Q13285 461 aa8.31□□□□□ -1.08
CNOT2-240ENST00000552599 SLMAPQ14BN4 828 aa8.31□□□□□ -1.08
CNOT2-240ENST00000552599 STK38Q15208 465 aa8.31□□□□□ -1.08
CNOT2-240ENST00000552599 APOBEC3HQ6NTF7 200 aaKnown RBP8.31□□□□□ -1.08
CNOT2-240ENST00000552599 DIS3L2Q8IYB7 885 aaKnown RBP8.31□□□□□ -1.08
CNOT2-240ENST00000552599 SRBD1Q8N5C6 995 aaKnown RBP8.31□□□□□ -1.08
CNOT2-240ENST00000552599 PIBF1Q8WXW3 757 aa8.31□□□□□ -1.08
CNOT2-240ENST00000552599 WASF1Q92558 559 aa8.31□□□□□ -1.08
CNOT2-240ENST00000552599 CYLDQ9NQC7 956 aa8.31□□□□□ -1.08
CNOT2-240ENST00000552599 VPS54Q9P1Q0 977 aa8.31□□□□□ -1.08
CNOT2-240ENST00000552599 RRP15Q9Y3B9 282 aaKnown RBP8.31□□□□□ -1.08
CNOT2-240ENST00000552599 V9GY48 417 aaPredicted RBP8.31□□□□□ -1.08
CNOT2-240ENST00000552599 TPPPO94811 219 aa8.3□□□□□ -1.08
CNOT2-240ENST00000552599 CALM1P0DP23 149 aa8.3□□□□□ -1.08
CNOT2-240ENST00000552599 CALM2P0DP24 149 aa8.3□□□□□ -1.08
CNOT2-240ENST00000552599 CALM3P0DP25 149 aa8.3□□□□□ -1.08
CNOT2-240ENST00000552599 SLURP2P0DP57 97 aa8.3□□□□□ -1.08
CNOT2-240ENST00000552599 ETFBP38117 255 aa8.3□□□□□ -1.08
CNOT2-240ENST00000552599 RENBPP51606 427 aa8.3□□□□□ -1.08
CNOT2-240ENST00000552599 NFIAQ12857 509 aa8.3□□□□□ -1.08
CNOT2-240ENST00000552599 DACT2Q5SW24 774 aa8.3□□□□□ -1.08
CNOT2-240ENST00000552599 CDC42EP5Q6NZY7 148 aa8.3□□□□□ -1.08
CNOT2-240ENST00000552599 ZNF444Q8N0Y2 327 aaPredicted RBP8.3□□□□□ -1.08
CNOT2-240ENST00000552599 FSIP1Q8NA03 581 aa8.3□□□□□ -1.08
CNOT2-240ENST00000552599 PNMA1Q8ND90 353 aa8.3□□□□□ -1.08
CNOT2-240ENST00000552599 CTCFLQ8NI51 663 aaPredicted RBP8.3□□□□□ -1.08
CNOT2-240ENST00000552599 CLSTN2Q9H4D0 955 aa8.3□□□□□ -1.08
CNOT2-240ENST00000552599 KAT14Q9H8E8 782 aa8.3□□□□□ -1.08
CNOT2-240ENST00000552599 DDX19AQ9NUU7 478 aaKnown RBP8.3□□□□□ -1.08
CNOT2-240ENST00000552599 USP40Q9NVE5 1235 aa8.3□□□□□ -1.08
CNOT2-240ENST00000552599 SPTLC2O15270 562 aa8.3□□□□□ -1.08
CNOT2-240ENST00000552599 YEATS4O95619 227 aa8.3□□□□□ -1.08
CNOT2-240ENST00000552599 PGRP06401 933 aa8.3□□□□□ -1.08
CNOT2-240ENST00000552599 VEGFAP15692 232 aaPredicted RBP8.3□□□□□ -1.08
CNOT2-240ENST00000552599 MARCKSP29966 332 aaPredicted RBP8.3□□□□□ -1.08
CNOT2-240ENST00000552599 CRKP46108 304 aa8.3□□□□□ -1.08
CNOT2-240ENST00000552599 CACNB3P54284 484 aa8.3□□□□□ -1.08
CNOT2-240ENST00000552599 HSD17B7P56937 341 aa8.3□□□□□ -1.08
CNOT2-240ENST00000552599 AKAP17AQ02040 695 aaKnown RBP8.3□□□□□ -1.08
CNOT2-240ENST00000552599 SQSTM1Q13501 440 aa8.3□□□□□ -1.08
CNOT2-240ENST00000552599 PTPN14Q15678 1187 aa8.3□□□□□ -1.08
CNOT2-240ENST00000552599 MAP3K11Q16584 847 aa8.3□□□□□ -1.08
CNOT2-240ENST00000552599 ARSHQ5FYA8 562 aa8.3□□□□□ -1.08
CNOT2-240ENST00000552599 DMRTA1Q5VZB9 504 aa8.3□□□□□ -1.08
CNOT2-240ENST00000552599 MMS22LQ6ZRQ5 1243 aa8.3□□□□□ -1.08
CNOT2-240ENST00000552599 NOSTRINQ8IVI9 506 aa8.3□□□□□ -1.08
CNOT2-240ENST00000552599 STAG2Q8N3U4 1231 aa8.3□□□□□ -1.08
CNOT2-240ENST00000552599 TEKT1Q969V4 418 aa8.3□□□□□ -1.08
CNOT2-240ENST00000552599 SPAG5Q96R06 1193 aa8.3□□□□□ -1.08
CNOT2-240ENST00000552599 C2orf49Q9BVC5 232 aaPredicted RBP8.3□□□□□ -1.08
CNOT2-240ENST00000552599 TNMDQ9H2S6 317 aa8.3□□□□□ -1.08
CNOT2-240ENST00000552599 PPP1R9AQ9ULJ8 1098 aa8.3□□□□□ -1.08
CNOT2-240ENST00000552599 STX8Q9UNK0 236 aa8.3□□□□□ -1.08
CNOT2-240ENST00000552599 FAM205CA6NFA0 338 aa8.29□□□□□ -1.08
CNOT2-240ENST00000552599 YDJCA8MPS7 323 aa8.29□□□□□ -1.08
CNOT2-240ENST00000552599 USP17L5A8MUK1 530 aa8.29□□□□□ -1.08
CNOT2-240ENST00000552599 LETM1O95202 739 aaPredicted RBP8.29□□□□□ -1.08
CNOT2-240ENST00000552599 DPEP1P16444 411 aa8.29□□□□□ -1.08
CNOT2-240ENST00000552599 SNW1Q13573 536 aaKnown RBP8.29□□□□□ -1.08
CNOT2-240ENST00000552599 SLC35G1Q2M3R5 365 aa8.29□□□□□ -1.08
CNOT2-240ENST00000552599 STRIP1Q5VSL9 837 aa8.29□□□□□ -1.08
CNOT2-240ENST00000552599 AGAP9Q5VTM2 703 aa8.29□□□□□ -1.08
CNOT2-240ENST00000552599 HHIPL2Q6UWX4 724 aa8.29□□□□□ -1.08
CNOT2-240ENST00000552599 ANKS3Q6ZW76 656 aa8.29□□□□□ -1.08
CNOT2-240ENST00000552599 PNMA8AQ86V59 439 aaPredicted RBP8.29□□□□□ -1.08
CNOT2-240ENST00000552599 KCNG4Q8TDN1 519 aa8.29□□□□□ -1.08
CNOT2-240ENST00000552599 HNRNPLLQ8WVV9 542 aaKnown RBP8.29□□□□□ -1.08
CNOT2-240ENST00000552599 TMEM47Q9BQJ4 181 aa8.29□□□□□ -1.08
CNOT2-240ENST00000552599 TRIM55Q9BYV6 548 aa8.29□□□□□ -1.08
CNOT2-240ENST00000552599 RABGEF1Q9UJ41 708 aa8.29□□□□□ -1.08
CNOT2-240ENST00000552599 A0A1B0GVL5 298 aa8.29□□□□□ -1.08
CNOT2-240ENST00000552599 PPIP5K2O43314 1243 aa8.29□□□□□ -1.08
CNOT2-240ENST00000552599 RNF40O75150 1001 aa8.29□□□□□ -1.08
CNOT2-240ENST00000552599 ZBTB7AO95365 584 aa8.29□□□□□ -1.08
CNOT2-240ENST00000552599 KCNA3P22001 575 aa8.29□□□□□ -1.08
CNOT2-240ENST00000552599 TOB1P50616 345 aaPredicted RBP8.29□□□□□ -1.08
CNOT2-240ENST00000552599 TSPY1Q01534 308 aa8.29□□□□□ -1.08
CNOT2-240ENST00000552599 PAK2Q13177 524 aa8.29□□□□□ -1.08
CNOT2-240ENST00000552599 PTPAQ15257 358 aa8.29□□□□□ -1.08
CNOT2-240ENST00000552599 SAFBQ15424 915 aaKnown RBP eCLIP8.29□□□□□ -1.08
CNOT2-240ENST00000552599 ADALQ6DHV7 355 aa8.29□□□□□ -1.08
CNOT2-240ENST00000552599 SAMD7Q7Z3H4 446 aa8.29□□□□□ -1.08
CNOT2-240ENST00000552599 CLEC10AQ8IUN9 316 aa8.29□□□□□ -1.08
CNOT2-240ENST00000552599 BRSK2Q8IWQ3 736 aa8.29□□□□□ -1.08
CNOT2-240ENST00000552599 ZFPM1Q8IX07 1006 aa8.29□□□□□ -1.08
CNOT2-240ENST00000552599 ENGASEQ8NFI3 743 aa8.29□□□□□ -1.08
CNOT2-240ENST00000552599 ANKS1AQ92625 1134 aa8.29□□□□□ -1.08
CNOT2-240ENST00000552599 EMID1Q96A84 441 aaPredicted RBP8.29□□□□□ -1.08
CNOT2-240ENST00000552599 TCP11L1Q9NUJ3 509 aa8.29□□□□□ -1.08
CNOT2-240ENST00000552599 XPO7Q9UIA9 1087 aaKnown RBP8.29□□□□□ -1.08
CNOT2-240ENST00000552599 CDV3Q9UKY7 258 aaKnown RBP8.29□□□□□ -1.08
CNOT2-240ENST00000552599 MYH8P13535 1937 aa8.29□□□□□ -1.08
CNOT2-240ENST00000552599 CFHP08603 1231 aa8.28□□□□□ -1.08
CNOT2-240ENST00000552599 XBP1P17861 261 aa8.28□□□□□ -1.08
CNOT2-240ENST00000552599 NDUFA8P51970 172 aa8.28□□□□□ -1.08
CNOT2-240ENST00000552599 INHBEP58166 350 aa8.28□□□□□ -1.08
CNOT2-240ENST00000552599 GABPAQ06546 454 aa8.28□□□□□ -1.08
CNOT2-240ENST00000552599 FMR1Q06787 632 aaKnown RBP eCLIP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms