RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 ZNF215Q9UL58 517 aaPredicted RBP19.56■□□□□ 0.72
CACNB3-222ENST00000552465 TELO2Q9Y4R8 837 aa19.56■□□□□ 0.72
CACNB3-222ENST00000552465 HERC4Q5GLZ8 1057 aaPredicted RBP19.55■□□□□ 0.72
CACNB3-222ENST00000552465 UTP14CQ5TAP6 766 aaKnown RBP19.55■□□□□ 0.72
CACNB3-222ENST00000552465 PLEKHM2Q8IWE5 1019 aa19.55■□□□□ 0.72
CACNB3-222ENST00000552465 CLP1Q92989 425 aaKnown RBP19.55■□□□□ 0.72
CACNB3-222ENST00000552465 EHMT1Q9H9B1 1298 aa19.55■□□□□ 0.72
CACNB3-222ENST00000552465 RC3H2Q9HBD1 1191 aaKnown RBP19.55■□□□□ 0.72
CACNB3-222ENST00000552465 RTEL1Q9NZ71 1219 aa19.55■□□□□ 0.72
CACNB3-222ENST00000552465 MUTYHQ9UIF7 546 aa19.55■□□□□ 0.72
CACNB3-222ENST00000552465 FRMPD4Q14CM0 1322 aa19.54■□□□□ 0.72
CACNB3-222ENST00000552465 ADGRA3Q8IWK6 1321 aa19.54■□□□□ 0.72
CACNB3-222ENST00000552465 ENPP3O14638 875 aa19.54■□□□□ 0.72
CACNB3-222ENST00000552465 FIBPO43427 364 aa19.54■□□□□ 0.72
CACNB3-222ENST00000552465 GHRP10912 638 aa19.54■□□□□ 0.72
CACNB3-222ENST00000552465 GTF2F1P35269 517 aaKnown RBP eCLIP19.54■□□□□ 0.72
CACNB3-222ENST00000552465 RRP1P56182 461 aaKnown RBP19.54■□□□□ 0.72
CACNB3-222ENST00000552465 GRM4Q14833 912 aa19.54■□□□□ 0.72
CACNB3-222ENST00000552465 CYB5R4Q7L1T6 521 aa19.54■□□□□ 0.72
CACNB3-222ENST00000552465 RNF135Q8IUD6 432 aa19.54■□□□□ 0.72
CACNB3-222ENST00000552465 OSBPL3Q9H4L5 887 aa19.54■□□□□ 0.72
CACNB3-222ENST00000552465 SUPT16HQ9Y5B9 1047 aaKnown RBP19.54■□□□□ 0.72
CACNB3-222ENST00000552465 NRCAMQ92823 1304 aa19.53■□□□□ 0.72
CACNB3-222ENST00000552465 PNMA6FA0A0J9YX94 578 aa19.53■□□□□ 0.72
CACNB3-222ENST00000552465 HIP1O00291 1037 aa19.53■□□□□ 0.72
CACNB3-222ENST00000552465 CYTH3O43739 400 aa19.53■□□□□ 0.72
CACNB3-222ENST00000552465 ADAM15Q13444 863 aa19.53■□□□□ 0.72
CACNB3-222ENST00000552465 SMAD4Q13485 552 aaKnown RBP19.53■□□□□ 0.72
CACNB3-222ENST00000552465 LPIN1Q14693 890 aa19.53■□□□□ 0.72
CACNB3-222ENST00000552465 RUFY4Q6ZNE9 571 aa19.53■□□□□ 0.72
CACNB3-222ENST00000552465 ZNF689Q96CS4 500 aaPredicted RBP19.53■□□□□ 0.72
CACNB3-222ENST00000552465 IGFLR1Q9H665 355 aa19.53■□□□□ 0.72
CACNB3-222ENST00000552465 MYH6P13533 1939 aa19.53■□□□□ 0.72
CACNB3-222ENST00000552465 STXBP3O00186 592 aa19.52■□□□□ 0.72
CACNB3-222ENST00000552465 LINC01565O15544 149 aa19.52■□□□□ 0.72
CACNB3-222ENST00000552465 TBX10O75333 385 aa19.52■□□□□ 0.72
CACNB3-222ENST00000552465 MGAT3Q09327 533 aa19.52■□□□□ 0.72
CACNB3-222ENST00000552465 CAMK1Q14012 370 aa19.52■□□□□ 0.72
CACNB3-222ENST00000552465 BTG3Q14201 252 aaPredicted RBP19.52■□□□□ 0.72
CACNB3-222ENST00000552465 B4GALNT3Q6L9W6 998 aa19.52■□□□□ 0.72
CACNB3-222ENST00000552465 TAF2Q6P1X5 1199 aa19.52■□□□□ 0.72
CACNB3-222ENST00000552465 SMC5Q8IY18 1101 aa19.52■□□□□ 0.72
CACNB3-222ENST00000552465 SENP7Q9BQF6 1050 aa19.52■□□□□ 0.72
CACNB3-222ENST00000552465 PLVAPQ9BX97 442 aa19.52■□□□□ 0.72
CACNB3-222ENST00000552465 CD207Q9UJ71 328 aa19.52■□□□□ 0.72
CACNB3-222ENST00000552465 LAMA4Q16363 1823 aa19.51■□□□□ 0.71
CACNB3-222ENST00000552465 MMP1P03956 469 aa19.51■□□□□ 0.71
CACNB3-222ENST00000552465 SP4Q02446 784 aa19.51■□□□□ 0.71
CACNB3-222ENST00000552465 EDAQ92838 391 aa19.51■□□□□ 0.71
CACNB3-222ENST00000552465 ALG13Q9NP73 1137 aaKnown RBP19.51■□□□□ 0.71
CACNB3-222ENST00000552465 PLAGL2Q9UPG8 496 aa19.51■□□□□ 0.71
CACNB3-222ENST00000552465 RALGAPA2Q2PPJ7 1873 aa19.5■□□□□ 0.71
CACNB3-222ENST00000552465 MYO7AQ13402 2215 aa19.5■□□□□ 0.71
CACNB3-222ENST00000552465 DGKIO75912 1065 aa19.5■□□□□ 0.71
CACNB3-222ENST00000552465 CSPG5O95196 566 aa19.5■□□□□ 0.71
CACNB3-222ENST00000552465 PCNX4Q63HM2 1172 aa19.5■□□□□ 0.71
CACNB3-222ENST00000552465 RSPH3Q86UC2 560 aa19.5■□□□□ 0.71
CACNB3-222ENST00000552465 CHD1LQ86WJ1 897 aa19.5■□□□□ 0.71
CACNB3-222ENST00000552465 NLRC5Q86WI3 1866 aa19.5■□□□□ 0.71
CACNB3-222ENST00000552465 TCF7P36402 384 aaPredicted RBP19.49■□□□□ 0.71
CACNB3-222ENST00000552465 FBXO47Q5MNV8 452 aa19.49■□□□□ 0.71
CACNB3-222ENST00000552465 XRRA1Q6P2D8 792 aa19.49■□□□□ 0.71
CACNB3-222ENST00000552465 BMP8AQ7Z5Y6 402 aa19.49■□□□□ 0.71
CACNB3-222ENST00000552465 NLRX1Q86UT6 975 aa19.49■□□□□ 0.71
CACNB3-222ENST00000552465 GIMAP8Q8ND71 665 aaPredicted RBP19.49■□□□□ 0.71
CACNB3-222ENST00000552465 P2RX5Q93086 422 aa19.49■□□□□ 0.71
CACNB3-222ENST00000552465 MSLNLQ96KJ4 702 aa19.49■□□□□ 0.71
CACNB3-222ENST00000552465 SENP2Q9HC62 589 aa19.49■□□□□ 0.71
CACNB3-222ENST00000552465 IFIT3O14879 490 aaKnown RBP19.48■□□□□ 0.71
CACNB3-222ENST00000552465 EYA4O95677 639 aa19.48■□□□□ 0.71
CACNB3-222ENST00000552465 TROAPQ12815 778 aa19.48■□□□□ 0.71
CACNB3-222ENST00000552465 TRDNQ13061 729 aa19.48■□□□□ 0.71
CACNB3-222ENST00000552465 PPFIA1Q13136 1202 aa19.48■□□□□ 0.71
CACNB3-222ENST00000552465 USP17L6PQ6QN14 398 aa19.48■□□□□ 0.71
CACNB3-222ENST00000552465 SMARCC2Q8TAQ2 1214 aa19.48■□□□□ 0.71
CACNB3-222ENST00000552465 SPPL3Q8TCT6 385 aa19.48■□□□□ 0.71
CACNB3-222ENST00000552465 DNAJB3Q8WWF6 145 aa19.48■□□□□ 0.71
CACNB3-222ENST00000552465 IL25Q9H293 177 aa19.48■□□□□ 0.71
CACNB3-222ENST00000552465 CDY2AQ9Y6F7 541 aa19.48■□□□□ 0.71
CACNB3-222ENST00000552465 MRPL42Q9Y6G3 142 aaKnown RBP19.48■□□□□ 0.71
CACNB3-222ENST00000552465 MBLAC1A4D2B0 266 aaPredicted RBP19.47■□□□□ 0.71
CACNB3-222ENST00000552465 ATP9AO75110 1047 aa19.47■□□□□ 0.71
CACNB3-222ENST00000552465 ITGB1P05556 798 aa19.47■□□□□ 0.71
CACNB3-222ENST00000552465 DNAJB1P25685 340 aa19.47■□□□□ 0.71
CACNB3-222ENST00000552465 NDUFV1P49821 464 aa19.47■□□□□ 0.71
CACNB3-222ENST00000552465 NUCB1Q02818 461 aa19.47■□□□□ 0.71
CACNB3-222ENST00000552465 GRIK4Q16099 956 aa19.47■□□□□ 0.71
CACNB3-222ENST00000552465 NAALADL2Q58DX5 795 aa19.47■□□□□ 0.71
CACNB3-222ENST00000552465 MARCH8Q5T0T0 291 aa19.47■□□□□ 0.71
CACNB3-222ENST00000552465 TSHZ1Q6ZSZ6 1077 aa19.47■□□□□ 0.71
CACNB3-222ENST00000552465 TRIM67Q6ZTA4 783 aa19.47■□□□□ 0.71
CACNB3-222ENST00000552465 RTN4RL1Q86UN2 441 aaPredicted RBP19.47■□□□□ 0.71
CACNB3-222ENST00000552465 CMTR2Q8IYT2 770 aaKnown RBP19.47■□□□□ 0.71
CACNB3-222ENST00000552465 CRIPAKQ8N1N5 446 aa19.47■□□□□ 0.71
CACNB3-222ENST00000552465 LINC01599Q8WXQ3 324 aa19.47■□□□□ 0.71
CACNB3-222ENST00000552465 PIBF1Q8WXW3 757 aa19.47■□□□□ 0.71
CACNB3-222ENST00000552465 PPP2R3CQ969Q6 453 aa19.47■□□□□ 0.71
CACNB3-222ENST00000552465 PHOX2BQ99453 314 aa19.47■□□□□ 0.71
CACNB3-222ENST00000552465 RWDD1Q9H446 243 aaPredicted RBP19.47■□□□□ 0.71
CACNB3-222ENST00000552465 AGO3Q9H9G7 860 aaKnown RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms