RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 FIBPO43427 364 aa18.87■□□□□ 0.61
RAB5C-209ENST00000552162 NCK2O43639 380 aa18.87■□□□□ 0.61
RAB5C-209ENST00000552162 CYTH3O43739 400 aa18.87■□□□□ 0.61
RAB5C-209ENST00000552162 LINC00271P0C7V0 271 aa18.87■□□□□ 0.61
RAB5C-209ENST00000552162 LTBRP36941 435 aa18.87■□□□□ 0.61
RAB5C-209ENST00000552162 UTP14CQ5TAP6 766 aaKnown RBP18.87■□□□□ 0.61
RAB5C-209ENST00000552162 C11orf84Q9BUA3 381 aaPredicted RBP18.87■□□□□ 0.61
RAB5C-209ENST00000552162 RTEL1Q9NZ71 1219 aa18.87■□□□□ 0.61
RAB5C-209ENST00000552162 RWDD3Q9Y3V2 267 aa18.87■□□□□ 0.61
RAB5C-209ENST00000552162 TELO2Q9Y4R8 837 aa18.87■□□□□ 0.61
RAB5C-209ENST00000552162 RB1P06400 928 aa18.86■□□□□ 0.61
RAB5C-209ENST00000552162 GHRP10912 638 aa18.86■□□□□ 0.61
RAB5C-209ENST00000552162 IRS1P35568 1242 aa18.86■□□□□ 0.61
RAB5C-209ENST00000552162 BMPR1AP36894 532 aa18.86■□□□□ 0.61
RAB5C-209ENST00000552162 MRE11P49959 708 aa18.86■□□□□ 0.61
RAB5C-209ENST00000552162 SP4Q02446 784 aa18.86■□□□□ 0.61
RAB5C-209ENST00000552162 NHLH1Q02575 133 aa18.86■□□□□ 0.61
RAB5C-209ENST00000552162 CLUL1Q15846 466 aa18.86■□□□□ 0.61
RAB5C-209ENST00000552162 LMAN2LQ9H0V9 348 aa18.86■□□□□ 0.61
RAB5C-209ENST00000552162 IL25Q9H293 177 aa18.86■□□□□ 0.61
RAB5C-209ENST00000552162 RC3H2Q9HBD1 1191 aaKnown RBP18.86■□□□□ 0.61
RAB5C-209ENST00000552162 SUPT16HQ9Y5B9 1047 aaKnown RBP18.86■□□□□ 0.61
RAB5C-209ENST00000552162 ZNF318Q5VUA4 2279 aa18.86■□□□□ 0.61
RAB5C-209ENST00000552162 NRCAMQ92823 1304 aa18.85■□□□□ 0.61
RAB5C-209ENST00000552162 GRM6O15303 877 aa18.85■□□□□ 0.61
RAB5C-209ENST00000552162 CHRNA1P02708 482 aa18.85■□□□□ 0.61
RAB5C-209ENST00000552162 NUCB1Q02818 461 aa18.85■□□□□ 0.61
RAB5C-209ENST00000552162 DLX2Q07687 328 aaPredicted RBP18.85■□□□□ 0.61
RAB5C-209ENST00000552162 HYAL1Q12794 435 aa18.85■□□□□ 0.61
RAB5C-209ENST00000552162 TRDNQ13061 729 aa18.85■□□□□ 0.61
RAB5C-209ENST00000552162 SMAD2Q15796 467 aaKnown RBP18.85■□□□□ 0.61
RAB5C-209ENST00000552162 CTC1Q2NKJ3 1217 aa18.85■□□□□ 0.61
RAB5C-209ENST00000552162 FBXL18Q96ME1 805 aa18.85■□□□□ 0.61
RAB5C-209ENST00000552162 UPF3BQ9BZI7 483 aaKnown RBP18.85■□□□□ 0.61
RAB5C-209ENST00000552162 KCNH6Q9H252 994 aa18.85■□□□□ 0.61
RAB5C-209ENST00000552162 RWDD1Q9H446 243 aaPredicted RBP18.85■□□□□ 0.61
RAB5C-209ENST00000552162 IFIT3O14879 490 aaKnown RBP18.84■□□□□ 0.61
RAB5C-209ENST00000552162 CSPG5O95196 566 aa18.84■□□□□ 0.61
RAB5C-209ENST00000552162 TAF2Q6P1X5 1199 aa18.84■□□□□ 0.61
RAB5C-209ENST00000552162 RUFY4Q6ZNE9 571 aa18.84■□□□□ 0.61
RAB5C-209ENST00000552162 CLP1Q92989 425 aaKnown RBP18.84■□□□□ 0.61
RAB5C-209ENST00000552162 POP1Q99575 1024 aaKnown RBP18.84■□□□□ 0.61
RAB5C-209ENST00000552162 EHMT1Q9H9B1 1298 aa18.84■□□□□ 0.61
RAB5C-209ENST00000552162 SENP2Q9HC62 589 aa18.84■□□□□ 0.61
RAB5C-209ENST00000552162 KIAA1671Q9BY89 1806 aa18.84■□□□□ 0.61
RAB5C-209ENST00000552162 TTC3P53804 2025 aa18.83■□□□□ 0.61
RAB5C-209ENST00000552162 ERICH2A1L162 156 aa18.83■□□□□ 0.6
RAB5C-209ENST00000552162 MBTPS2O43462 519 aa18.83■□□□□ 0.6
RAB5C-209ENST00000552162 TBX10O75333 385 aa18.83■□□□□ 0.6
RAB5C-209ENST00000552162 MGAT3Q09327 533 aa18.83■□□□□ 0.6
RAB5C-209ENST00000552162 LPIN1Q14693 890 aa18.83■□□□□ 0.6
RAB5C-209ENST00000552162 PCNX4Q63HM2 1172 aa18.83■□□□□ 0.6
RAB5C-209ENST00000552162 HFE2Q6ZVN8 426 aa18.83■□□□□ 0.6
RAB5C-209ENST00000552162 SMARCC2Q8TAQ2 1214 aa18.83■□□□□ 0.6
RAB5C-209ENST00000552162 PIBF1Q8WXW3 757 aa18.83■□□□□ 0.6
RAB5C-209ENST00000552162 SENP7Q9BQF6 1050 aa18.83■□□□□ 0.6
RAB5C-209ENST00000552162 MMP1P03956 469 aa18.82■□□□□ 0.6
RAB5C-209ENST00000552162 GTF2F1P35269 517 aaKnown RBP eCLIP18.82■□□□□ 0.6
RAB5C-209ENST00000552162 TCF7P36402 384 aaPredicted RBP18.82■□□□□ 0.6
RAB5C-209ENST00000552162 TROAPQ12815 778 aa18.82■□□□□ 0.6
RAB5C-209ENST00000552162 PPFIA1Q13136 1202 aa18.82■□□□□ 0.6
RAB5C-209ENST00000552162 SMAD4Q13485 552 aaKnown RBP18.82■□□□□ 0.6
RAB5C-209ENST00000552162 AAMPQ13685 434 aa18.82■□□□□ 0.6
RAB5C-209ENST00000552162 BTG3Q14201 252 aaPredicted RBP18.82■□□□□ 0.6
RAB5C-209ENST00000552162 RSPH3Q86UC2 560 aa18.82■□□□□ 0.6
RAB5C-209ENST00000552162 MUTYHQ9UIF7 546 aa18.82■□□□□ 0.6
RAB5C-209ENST00000552162 TUBE1Q9UJT0 475 aa18.82■□□□□ 0.6
RAB5C-209ENST00000552162 ENPP3O14638 875 aa18.81■□□□□ 0.6
RAB5C-209ENST00000552162 WTAPQ15007 396 aa18.81■□□□□ 0.6
RAB5C-209ENST00000552162 XRRA1Q6P2D8 792 aa18.81■□□□□ 0.6
RAB5C-209ENST00000552162 USP17L6PQ6QN14 398 aa18.81■□□□□ 0.6
RAB5C-209ENST00000552162 NLRX1Q86UT6 975 aa18.81■□□□□ 0.6
RAB5C-209ENST00000552162 GIMAP8Q8ND71 665 aaPredicted RBP18.81■□□□□ 0.6
RAB5C-209ENST00000552162 CUL5Q93034 780 aa18.81■□□□□ 0.6
RAB5C-209ENST00000552162 ZNF689Q96CS4 500 aaPredicted RBP18.81■□□□□ 0.6
RAB5C-209ENST00000552162 IGFLR1Q9H665 355 aa18.81■□□□□ 0.6
RAB5C-209ENST00000552162 LINC01565O15544 149 aa18.8■□□□□ 0.6
RAB5C-209ENST00000552162 IGHDP01880 384 aa18.8■□□□□ 0.6
RAB5C-209ENST00000552162 CYP21A2P08686 494 aa18.8■□□□□ 0.6
RAB5C-209ENST00000552162 MARK3P27448 753 aa18.8■□□□□ 0.6
RAB5C-209ENST00000552162 SART3Q15020 963 aaKnown RBP18.8■□□□□ 0.6
RAB5C-209ENST00000552162 GRIK4Q16099 956 aa18.8■□□□□ 0.6
RAB5C-209ENST00000552162 HERC4Q5GLZ8 1057 aaPredicted RBP18.8■□□□□ 0.6
RAB5C-209ENST00000552162 FBXO47Q5MNV8 452 aa18.8■□□□□ 0.6
RAB5C-209ENST00000552162 TSHZ1Q6ZSZ6 1077 aa18.8■□□□□ 0.6
RAB5C-209ENST00000552162 RALYLQ86SE5 291 aaKnown RBP18.8■□□□□ 0.6
RAB5C-209ENST00000552162 MFSD14AQ96MC6 490 aa18.8■□□□□ 0.6
RAB5C-209ENST00000552162 PLVAPQ9BX97 442 aa18.8■□□□□ 0.6
RAB5C-209ENST00000552162 ALG13Q9NP73 1137 aaKnown RBP18.8■□□□□ 0.6
RAB5C-209ENST00000552162 CD207Q9UJ71 328 aa18.8■□□□□ 0.6
RAB5C-209ENST00000552162 CDY2AQ9Y6F7 541 aa18.8■□□□□ 0.6
RAB5C-209ENST00000552162 U3KPZ7 1027 aaPredicted RBP18.8■□□□□ 0.6
RAB5C-209ENST00000552162 MBLAC1A4D2B0 266 aaPredicted RBP18.79■□□□□ 0.6
RAB5C-209ENST00000552162 STXBP3O00186 592 aa18.79■□□□□ 0.6
RAB5C-209ENST00000552162 PIK3CDO00329 1044 aa18.79■□□□□ 0.6
RAB5C-209ENST00000552162 MEIS2O14770 477 aa18.79■□□□□ 0.6
RAB5C-209ENST00000552162 DGKIO75912 1065 aa18.79■□□□□ 0.6
RAB5C-209ENST00000552162 CATIPQ7Z7H3 387 aa18.79■□□□□ 0.6
RAB5C-209ENST00000552162 RNF135Q8IUD6 432 aa18.79■□□□□ 0.6
RAB5C-209ENST00000552162 DNAJB3Q8WWF6 145 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms