RNA–Protein interactions for RNA: ENST00000551969.5

SP1-204, Transcript of Sp1 transcription factor, humanhuman

TSL 3

Gene SP1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-204ENST00000551969 KIF28PB7ZC32 967 aa13.4□□□□□ -0.26
SP1-204ENST00000551969 MEIS1O00470 390 aa13.4□□□□□ -0.26
SP1-204ENST00000551969 CYP3A4P08684 503 aa13.4□□□□□ -0.26
SP1-204ENST00000551969 ACRP10323 421 aa13.4□□□□□ -0.26
SP1-204ENST00000551969 SELPP16109 830 aa13.4□□□□□ -0.26
SP1-204ENST00000551969 TCF7P36402 384 aaPredicted RBP13.4□□□□□ -0.26
SP1-204ENST00000551969 TRIM29Q14134 588 aa13.4□□□□□ -0.26
SP1-204ENST00000551969 NTRK3Q16288 839 aa13.4□□□□□ -0.26
SP1-204ENST00000551969 C9orf50Q5SZB4 431 aa13.4□□□□□ -0.26
SP1-204ENST00000551969 FAM109BQ6ICB4 259 aaPredicted RBP13.4□□□□□ -0.26
SP1-204ENST00000551969 PLA2G4DQ86XP0 818 aa13.4□□□□□ -0.26
SP1-204ENST00000551969 C16orf70Q9BSU1 422 aa13.4□□□□□ -0.26
SP1-204ENST00000551969 PKD2L1Q9P0L9 805 aa13.4□□□□□ -0.26
SP1-204ENST00000551969 NID2Q14112 1375 aa13.4□□□□□ -0.26
SP1-204ENST00000551969 NRCAMQ92823 1304 aa13.39□□□□□ -0.27
SP1-204ENST00000551969 HAS3O00219 553 aa13.39□□□□□ -0.27
SP1-204ENST00000551969 BACH1O14867 736 aa13.39□□□□□ -0.27
SP1-204ENST00000551969 MAP3K13O43283 966 aa13.39□□□□□ -0.27
SP1-204ENST00000551969 MARCH6O60337 910 aa13.39□□□□□ -0.27
SP1-204ENST00000551969 PFKFB2O60825 505 aa13.39□□□□□ -0.27
SP1-204ENST00000551969 EFCAB14O75071 495 aa13.39□□□□□ -0.27
SP1-204ENST00000551969 IQCF3P0C7M6 154 aa13.39□□□□□ -0.27
SP1-204ENST00000551969 CLK2P49760 499 aaKnown RBP13.39□□□□□ -0.27
SP1-204ENST00000551969 SLC26A2P50443 739 aa13.39□□□□□ -0.27
SP1-204ENST00000551969 PKN1Q16512 942 aa13.39□□□□□ -0.27
SP1-204ENST00000551969 TMEM240Q5SV17 173 aa13.39□□□□□ -0.27
SP1-204ENST00000551969 FAM160B1Q5W0V3 765 aa13.39□□□□□ -0.27
SP1-204ENST00000551969 GDF6Q6KF10 455 aaPredicted RBP13.39□□□□□ -0.27
SP1-204ENST00000551969 DEFB128Q7Z7B8 93 aa13.39□□□□□ -0.27
SP1-204ENST00000551969 HERVK_113Q902F9 699 aa13.39□□□□□ -0.27
SP1-204ENST00000551969 LRCH3Q96II8 777 aa13.39□□□□□ -0.27
SP1-204ENST00000551969 NAP1L4Q99733 375 aaKnown RBP13.39□□□□□ -0.27
SP1-204ENST00000551969 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.39□□□□□ -0.27
SP1-204ENST00000551969 LARP6Q9BRS8 491 aaKnown RBP13.39□□□□□ -0.27
SP1-204ENST00000551969 ZNF577Q9BSK1 485 aa13.39□□□□□ -0.27
SP1-204ENST00000551969 TMEM260Q9NX78 707 aa13.39□□□□□ -0.27
SP1-204ENST00000551969 VPS54Q9P1Q0 977 aa13.39□□□□□ -0.27
SP1-204ENST00000551969 PCDHA4Q9UN74 947 aa13.39□□□□□ -0.27
SP1-204ENST00000551969 PLXNA1Q9UIW2 1896 aa13.39□□□□□ -0.27
SP1-204ENST00000551969 NFASCO94856 1347 aa13.39□□□□□ -0.27
SP1-204ENST00000551969 EMSYQ7Z589 1322 aa13.39□□□□□ -0.27
SP1-204ENST00000551969 CCDC194A0A1B0GVG4 234 aa13.38□□□□□ -0.27
SP1-204ENST00000551969 RRN3P2A6NIE6 340 aa13.38□□□□□ -0.27
SP1-204ENST00000551969 IPO5O00410 1097 aaKnown RBP13.38□□□□□ -0.27
SP1-204ENST00000551969 ATP9AO75110 1047 aa13.38□□□□□ -0.27
SP1-204ENST00000551969 CAND2O75155 1236 aa13.38□□□□□ -0.27
SP1-204ENST00000551969 SMIM10L2AP0DMW4 78 aa13.38□□□□□ -0.27
SP1-204ENST00000551969 SMIM10L2BP0DMW5 78 aa13.38□□□□□ -0.27
SP1-204ENST00000551969 KCNA2P16389 499 aa13.38□□□□□ -0.27
SP1-204ENST00000551969 THPOP40225 353 aa13.38□□□□□ -0.27
SP1-204ENST00000551969 KCNJ6P48051 423 aa13.38□□□□□ -0.27
SP1-204ENST00000551969 AK2P54819 239 aa13.38□□□□□ -0.27
SP1-204ENST00000551969 RAB30Q15771 203 aa13.38□□□□□ -0.27
SP1-204ENST00000551969 TYW1BQ6NUM6 668 aa13.38□□□□□ -0.27
SP1-204ENST00000551969 MIS18BP1Q6P0N0 1132 aa13.38□□□□□ -0.27
SP1-204ENST00000551969 TAF2Q6P1X5 1199 aa13.38□□□□□ -0.27
SP1-204ENST00000551969 OTOP2Q7RTS6 562 aa13.38□□□□□ -0.27
SP1-204ENST00000551969 PLPPR4Q7Z2D5 763 aa13.38□□□□□ -0.27
SP1-204ENST00000551969 BLIDQ8IZY5 108 aa13.38□□□□□ -0.27
SP1-204ENST00000551969 KIF12Q96FN5 646 aa13.38□□□□□ -0.27
SP1-204ENST00000551969 SCLYQ96I15 445 aa13.38□□□□□ -0.27
SP1-204ENST00000551969 PGBD1Q96JS3 809 aa13.38□□□□□ -0.27
SP1-204ENST00000551969 AGO4Q9HCK5 861 aaKnown RBP13.38□□□□□ -0.27
SP1-204ENST00000551969 SAMM50Q9Y512 469 aa13.38□□□□□ -0.27
SP1-204ENST00000551969 DNAH12Q6ZR08 3092 aa13.38□□□□□ -0.27
SP1-204ENST00000551969 TMEM265A0A087WTH1 108 aa13.37□□□□□ -0.27
SP1-204ENST00000551969 RSPH10B2B2RC85 870 aa13.37□□□□□ -0.27
SP1-204ENST00000551969 PPFIA3O75145 1194 aa13.37□□□□□ -0.27
SP1-204ENST00000551969 BAIAP3O94812 1187 aa13.37□□□□□ -0.27
SP1-204ENST00000551969 RSPH10BP0C881 870 aa13.37□□□□□ -0.27
SP1-204ENST00000551969 STAT5BP51692 787 aa13.37□□□□□ -0.27
SP1-204ENST00000551969 EPHB4P54760 987 aa13.37□□□□□ -0.27
SP1-204ENST00000551969 IKBKEQ14164 716 aa13.37□□□□□ -0.27
SP1-204ENST00000551969 PRR16Q569H4 304 aa13.37□□□□□ -0.27
SP1-204ENST00000551969 LRRC8DQ7L1W4 858 aa13.37□□□□□ -0.27
SP1-204ENST00000551969 KRT25Q7Z3Z0 450 aa13.37□□□□□ -0.27
SP1-204ENST00000551969 CKAP2LQ8IYA6 745 aa13.37□□□□□ -0.27
SP1-204ENST00000551969 PHOSPHO2Q8TCD6 241 aa13.37□□□□□ -0.27
SP1-204ENST00000551969 ZSCAN31Q96LW9 406 aaPredicted RBP13.37□□□□□ -0.27
SP1-204ENST00000551969 RNPEPQ9H4A4 650 aa13.37□□□□□ -0.27
SP1-204ENST00000551969 SETD4Q9NVD3 440 aa13.37□□□□□ -0.27
SP1-204ENST00000551969 TPCN1Q9ULQ1 816 aa13.37□□□□□ -0.27
SP1-204ENST00000551969 LIMCH1Q9UPQ0 1083 aa13.37□□□□□ -0.27
SP1-204ENST00000551969 TRPC6Q9Y210 931 aa13.37□□□□□ -0.27
SP1-204ENST00000551969 M0QZ92 97 aa13.36□□□□□ -0.27
SP1-204ENST00000551969 SOX1O00570 391 aaPredicted RBP13.36□□□□□ -0.27
SP1-204ENST00000551969 PSAPP07602 524 aa13.36□□□□□ -0.27
SP1-204ENST00000551969 ARP10275 920 aa13.36□□□□□ -0.27
SP1-204ENST00000551969 CKBP12277 381 aa13.36□□□□□ -0.27
SP1-204ENST00000551969 ACTR2P61160 394 aa13.36□□□□□ -0.27
SP1-204ENST00000551969 KRT76Q01546 638 aa13.36□□□□□ -0.27
SP1-204ENST00000551969 SCRN1Q12765 414 aa13.36□□□□□ -0.27
SP1-204ENST00000551969 PPFIA1Q13136 1202 aa13.36□□□□□ -0.27
SP1-204ENST00000551969 SEMA3FQ13275 785 aa13.36□□□□□ -0.27
SP1-204ENST00000551969 NONOQ15233 471 aaKnown RBP eCLIP13.36□□□□□ -0.27
SP1-204ENST00000551969 SAFBQ15424 915 aaKnown RBP eCLIP13.36□□□□□ -0.27
SP1-204ENST00000551969 C16orf59Q7L2K0 433 aa13.36□□□□□ -0.27
SP1-204ENST00000551969 SERINC5Q86VE9 423 aa13.36□□□□□ -0.27
SP1-204ENST00000551969 SMAP1Q8IYB5 467 aaPredicted RBP13.36□□□□□ -0.27
SP1-204ENST00000551969 PIP4P2Q8N4L2 257 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms