RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 GALR2O43603 387 aaPredicted RBP17.78■□□□□ 0.44
CACNB3-220ENST00000551716 CCND2P30279 289 aa17.78■□□□□ 0.44
CACNB3-220ENST00000551716 NRIP1P48552 1158 aa17.78■□□□□ 0.44
CACNB3-220ENST00000551716 TRAF1Q13077 416 aa17.78■□□□□ 0.44
CACNB3-220ENST00000551716 NEDD9Q14511 834 aa17.78■□□□□ 0.44
CACNB3-220ENST00000551716 GNPTABQ3T906 1256 aa17.78■□□□□ 0.44
CACNB3-220ENST00000551716 CMTR2Q8IYT2 770 aaKnown RBP17.78■□□□□ 0.44
CACNB3-220ENST00000551716 PNMA1Q8ND90 353 aa17.78■□□□□ 0.44
CACNB3-220ENST00000551716 CPVLQ9H3G5 476 aa17.78■□□□□ 0.44
CACNB3-220ENST00000551716 TLR9Q9NR96 1032 aa17.78■□□□□ 0.44
CACNB3-220ENST00000551716 RIF1Q5UIP0 2472 aaKnown RBP17.78■□□□□ 0.44
CACNB3-220ENST00000551716 ZMYM6O95789 1325 aa17.77■□□□□ 0.44
CACNB3-220ENST00000551716 NRCAMQ92823 1304 aa17.77■□□□□ 0.44
CACNB3-220ENST00000551716 KIAA1217Q5T5P2 1943 aa17.77■□□□□ 0.44
CACNB3-220ENST00000551716 SORBS3O60504 671 aa17.77■□□□□ 0.44
CACNB3-220ENST00000551716 CHRNA1P02708 482 aa17.77■□□□□ 0.44
CACNB3-220ENST00000551716 PGM5Q15124 567 aa17.77■□□□□ 0.44
CACNB3-220ENST00000551716 PTPN21Q16825 1174 aa17.77■□□□□ 0.44
CACNB3-220ENST00000551716 IQCA1Q86XH1 822 aa17.77■□□□□ 0.44
CACNB3-220ENST00000551716 RIPOR3Q96MK2 946 aa17.77■□□□□ 0.44
CACNB3-220ENST00000551716 TLE6Q9H808 572 aa17.77■□□□□ 0.44
CACNB3-220ENST00000551716 KAT14Q9H8E8 782 aa17.77■□□□□ 0.44
CACNB3-220ENST00000551716 JMJD4Q9H9V9 463 aa17.77■□□□□ 0.44
CACNB3-220ENST00000551716 VAT1LQ9HCJ6 419 aa17.77■□□□□ 0.44
CACNB3-220ENST00000551716 TRPC6Q9Y210 931 aa17.77■□□□□ 0.44
CACNB3-220ENST00000551716 STAM2O75886 525 aa17.76■□□□□ 0.43
CACNB3-220ENST00000551716 CSPG5O95196 566 aa17.76■□□□□ 0.43
CACNB3-220ENST00000551716 RPLP2P05387 115 aaKnown RBP17.76■□□□□ 0.43
CACNB3-220ENST00000551716 ITGB1P05556 798 aa17.76■□□□□ 0.43
CACNB3-220ENST00000551716 PARP1P09874 1014 aaKnown RBP17.76■□□□□ 0.43
CACNB3-220ENST00000551716 NBL1P41271 181 aa17.76■□□□□ 0.43
CACNB3-220ENST00000551716 ADAM17P78536 824 aa17.76■□□□□ 0.43
CACNB3-220ENST00000551716 ARHGAP4P98171 946 aa17.76■□□□□ 0.43
CACNB3-220ENST00000551716 MCMDC2Q4G0Z9 681 aa17.76■□□□□ 0.43
CACNB3-220ENST00000551716 METTL7BQ6UX53 244 aa17.76■□□□□ 0.43
CACNB3-220ENST00000551716 POF1BQ8WVV4 589 aa17.76■□□□□ 0.43
CACNB3-220ENST00000551716 EVI5LQ96CN4 794 aa17.76■□□□□ 0.43
CACNB3-220ENST00000551716 NLRC5Q86WI3 1866 aa17.75■□□□□ 0.43
CACNB3-220ENST00000551716 STAG3L1P0CL83 205 aa17.75■□□□□ 0.43
CACNB3-220ENST00000551716 SRGAP2BP0DMP2 458 aa17.75■□□□□ 0.43
CACNB3-220ENST00000551716 GHRP10912 638 aa17.75■□□□□ 0.43
CACNB3-220ENST00000551716 DNAJB1P25685 340 aa17.75■□□□□ 0.43
CACNB3-220ENST00000551716 UBE3AQ05086 875 aa17.75■□□□□ 0.43
CACNB3-220ENST00000551716 LPIN1Q14693 890 aa17.75■□□□□ 0.43
CACNB3-220ENST00000551716 FAM43BQ6ZT52 329 aaPredicted RBP17.75■□□□□ 0.43
CACNB3-220ENST00000551716 ADGRD2Q7Z7M1 963 aa17.75■□□□□ 0.43
CACNB3-220ENST00000551716 ZBTB33Q86T24 672 aa17.75■□□□□ 0.43
CACNB3-220ENST00000551716 RBM23Q86U06 439 aaKnown RBP17.75■□□□□ 0.43
CACNB3-220ENST00000551716 KLHL23Q8NBE8 558 aa17.75■□□□□ 0.43
CACNB3-220ENST00000551716 MICAL1Q8TDZ2 1067 aa17.75■□□□□ 0.43
CACNB3-220ENST00000551716 LMBR1Q8WVP7 490 aa17.75■□□□□ 0.43
CACNB3-220ENST00000551716 SUSD6Q92537 303 aa17.75■□□□□ 0.43
CACNB3-220ENST00000551716 CDCA3Q99618 268 aaPredicted RBP17.75■□□□□ 0.43
CACNB3-220ENST00000551716 FTHL17Q9BXU8 183 aa17.75■□□□□ 0.43
CACNB3-220ENST00000551716 BARX2Q9UMQ3 279 aaPredicted RBP17.75■□□□□ 0.43
CACNB3-220ENST00000551716 MRPL42Q9Y6G3 142 aaKnown RBP17.75■□□□□ 0.43
CACNB3-220ENST00000551716 PRR23AA6NEV1 266 aa17.74■□□□□ 0.43
CACNB3-220ENST00000551716 RBAK-RBAKDNI3L0D1 243 aa17.74■□□□□ 0.43
CACNB3-220ENST00000551716 KDM4AO75164 1064 aa17.74■□□□□ 0.43
CACNB3-220ENST00000551716 MX1P20591 662 aa17.74■□□□□ 0.43
CACNB3-220ENST00000551716 HAND2P61296 217 aa17.74■□□□□ 0.43
CACNB3-220ENST00000551716 PDE12Q6L8Q7 609 aaKnown RBP17.74■□□□□ 0.43
CACNB3-220ENST00000551716 ASCL5Q7RTU5 278 aa17.74■□□□□ 0.43
CACNB3-220ENST00000551716 NPAS4Q8IUM7 802 aa17.74■□□□□ 0.43
CACNB3-220ENST00000551716 UBALD2Q8IYN6 164 aa17.74■□□□□ 0.43
CACNB3-220ENST00000551716 NEK1Q96PY6 1258 aa17.74■□□□□ 0.43
CACNB3-220ENST00000551716 GCOM1H8Y6P7 765 aaPredicted RBP17.73■□□□□ 0.43
CACNB3-220ENST00000551716 POLR2MP0CAP2 368 aa17.73■□□□□ 0.43
CACNB3-220ENST00000551716 ID4P47928 161 aa17.73■□□□□ 0.43
CACNB3-220ENST00000551716 MCTP2Q6DN12 878 aa17.73■□□□□ 0.43
CACNB3-220ENST00000551716 TSHZ1Q6ZSZ6 1077 aa17.73■□□□□ 0.43
CACNB3-220ENST00000551716 ATP8B4Q8TF62 1192 aa17.73■□□□□ 0.43
CACNB3-220ENST00000551716 GPR20Q99678 358 aa17.73■□□□□ 0.43
CACNB3-220ENST00000551716 ZKSCAN3Q9BRR0 538 aa17.73■□□□□ 0.43
CACNB3-220ENST00000551716 RNF216Q9NWF9 866 aaPredicted RBP17.73■□□□□ 0.43
CACNB3-220ENST00000551716 PCDHB12Q9Y5F1 795 aa17.73■□□□□ 0.43
CACNB3-220ENST00000551716 PCDHA1Q9Y5I3 950 aa17.73■□□□□ 0.43
CACNB3-220ENST00000551716 SQORQ9Y6N5 450 aa17.73■□□□□ 0.43
CACNB3-220ENST00000551716 FAM186AA6NE01 2351 aa17.72■□□□□ 0.43
CACNB3-220ENST00000551716 TRIM6-TRIM34B2RNG4 842 aa17.72■□□□□ 0.43
CACNB3-220ENST00000551716 SPATA31C2B4DYI2 1134 aa17.72■□□□□ 0.43
CACNB3-220ENST00000551716 OPLAHO14841 1288 aa17.72■□□□□ 0.43
CACNB3-220ENST00000551716 GLP2RO95838 553 aa17.72■□□□□ 0.43
CACNB3-220ENST00000551716 HOXA13P31271 388 aaPredicted RBP17.72■□□□□ 0.43
CACNB3-220ENST00000551716 FBXO47Q5MNV8 452 aa17.72■□□□□ 0.43
CACNB3-220ENST00000551716 CYFIP1Q7L576 1253 aa17.72■□□□□ 0.43
CACNB3-220ENST00000551716 GIMAP8Q8ND71 665 aaPredicted RBP17.72■□□□□ 0.43
CACNB3-220ENST00000551716 NKD2Q969F2 451 aaPredicted RBP17.72■□□□□ 0.43
CACNB3-220ENST00000551716 AAASQ9NRG9 546 aa17.72■□□□□ 0.43
CACNB3-220ENST00000551716 NR2E1Q9Y466 385 aa17.72■□□□□ 0.43
CACNB3-220ENST00000551716 MYH7BA7E2Y1 1941 aa17.71■□□□□ 0.43
CACNB3-220ENST00000551716 ZNF213O14771 459 aa17.71■□□□□ 0.43
CACNB3-220ENST00000551716 ZBTB5O15062 677 aa17.71■□□□□ 0.43
CACNB3-220ENST00000551716 FIBPO43427 364 aa17.71■□□□□ 0.43
CACNB3-220ENST00000551716 MFAP1P55081 439 aaKnown RBP17.71■□□□□ 0.43
CACNB3-220ENST00000551716 MGAT3Q09327 533 aa17.71■□□□□ 0.43
CACNB3-220ENST00000551716 UTP14CQ5TAP6 766 aaKnown RBP17.71■□□□□ 0.43
CACNB3-220ENST00000551716 TMEM184AQ6ZMB5 413 aa17.71■□□□□ 0.43
CACNB3-220ENST00000551716 CRIPAKQ8N1N5 446 aa17.71■□□□□ 0.43
CACNB3-220ENST00000551716 IL31RAQ8NI17 732 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms