RNA–Protein interactions for RNA: ENST00000551551.1

ATXN2-223, Transcript of ataxin 2, human

TSL 2

Gene ATXN2, Length 1,256 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN2-223	ENST00000551551	ITGB8	P26012	769 aa		10.29	□□□□□ -0.76
ATXN2-223	ENST00000551551	SLC35G1	Q2M3R5	365 aa		10.29	□□□□□ -0.76
ATXN2-223	ENST00000551551	IER5	Q5VY09	327 aa		10.29	□□□□□ -0.76
ATXN2-223	ENST00000551551	FAM160B1	Q5W0V3	765 aa		10.29	□□□□□ -0.76
ATXN2-223	ENST00000551551	WWC2	Q6AWC2	1192 aa		10.29	□□□□□ -0.76
ATXN2-223	ENST00000551551	CNKSR3	Q6P9H4	555 aa		10.29	□□□□□ -0.76
ATXN2-223	ENST00000551551	LRRC8D	Q7L1W4	858 aa		10.29	□□□□□ -0.76
ATXN2-223	ENST00000551551	SERINC5	Q86VE9	423 aa		10.29	□□□□□ -0.76
ATXN2-223	ENST00000551551	SMAP1	Q8IYB5	467 aa	Predicted RBP	10.29	□□□□□ -0.76
ATXN2-223	ENST00000551551	EXOC8	Q8IYI6	725 aa		10.29	□□□□□ -0.76
ATXN2-223	ENST00000551551	ZNF579	Q8NAF0	562 aa	Known RBP	10.29	□□□□□ -0.76
ATXN2-223	ENST00000551551	KAT2B	Q92831	832 aa		10.29	□□□□□ -0.76
ATXN2-223	ENST00000551551	TIFA	Q96CG3	184 aa		10.29	□□□□□ -0.76
ATXN2-223	ENST00000551551	GAS2L1	Q99501	681 aa	Predicted RBP	10.29	□□□□□ -0.76
ATXN2-223	ENST00000551551	SLK	Q9H2G2	1235 aa	Predicted RBP	10.29	□□□□□ -0.76
ATXN2-223	ENST00000551551	BRMS1	Q9HCU9	246 aa		10.29	□□□□□ -0.76
ATXN2-223	ENST00000551551	JPH1	Q9HDC5	661 aa	Predicted RBP	10.29	□□□□□ -0.76
ATXN2-223	ENST00000551551	KCNH7	Q9NS40	1196 aa		10.29	□□□□□ -0.76
ATXN2-223	ENST00000551551	HDAC6	Q9UBN7	1215 aa		10.29	□□□□□ -0.76
ATXN2-223	ENST00000551551	CEP131	Q9UPN4	1083 aa		10.29	□□□□□ -0.76
ATXN2-223	ENST00000551551	CEP290	O15078	2479 aa		10.29	□□□□□ -0.76
ATXN2-223	ENST00000551551	CNTNAP5	Q8WYK1	1306 aa		10.29	□□□□□ -0.76
ATXN2-223	ENST00000551551	ALPK3	Q96L96	1907 aa		10.29	□□□□□ -0.76
ATXN2-223	ENST00000551551	RSPH10B2	B2RC85	870 aa		10.28	□□□□□ -0.76
ATXN2-223	ENST00000551551	DKC1	O60832	514 aa	Known RBP eCLIP	10.28	□□□□□ -0.76
ATXN2-223	ENST00000551551	RSPH10B	P0C881	870 aa		10.28	□□□□□ -0.76
ATXN2-223	ENST00000551551	CYP2C9	P11712	490 aa		10.28	□□□□□ -0.76
ATXN2-223	ENST00000551551	CKB	P12277	381 aa		10.28	□□□□□ -0.76
ATXN2-223	ENST00000551551	ATP2A2	P16615	1042 aa	Known RBP	10.28	□□□□□ -0.76
ATXN2-223	ENST00000551551	ITGB5	P18084	799 aa		10.28	□□□□□ -0.76
ATXN2-223	ENST00000551551	TCF7	P36402	384 aa	Predicted RBP	10.28	□□□□□ -0.76
ATXN2-223	ENST00000551551	CLK2	P49760	499 aa	Known RBP	10.28	□□□□□ -0.76
ATXN2-223	ENST00000551551	CCL23	P55773	120 aa		10.28	□□□□□ -0.76
ATXN2-223	ENST00000551551	NLRP5	P59047	1200 aa		10.28	□□□□□ -0.76
ATXN2-223	ENST00000551551	CHMP4BP1	P59074	171 aa		10.28	□□□□□ -0.76
ATXN2-223	ENST00000551551	ARHGAP4	P98171	946 aa		10.28	□□□□□ -0.76
ATXN2-223	ENST00000551551	SP2	Q02086	613 aa		10.28	□□□□□ -0.76
ATXN2-223	ENST00000551551	APOBR	Q0VD83	1088 aa		10.28	□□□□□ -0.76
ATXN2-223	ENST00000551551	C9orf50	Q5SZB4	431 aa		10.28	□□□□□ -0.76
ATXN2-223	ENST00000551551	MIS18BP1	Q6P0N0	1132 aa		10.28	□□□□□ -0.76
ATXN2-223	ENST00000551551	CMTR1	Q8N1G2	835 aa	Known RBP	10.28	□□□□□ -0.76
ATXN2-223	ENST00000551551	RDM1	Q8NG50	284 aa		10.28	□□□□□ -0.76
ATXN2-223	ENST00000551551	KCNV2	Q8TDN2	545 aa		10.28	□□□□□ -0.76
ATXN2-223	ENST00000551551	IL17RA	Q96F46	866 aa		10.28	□□□□□ -0.76
ATXN2-223	ENST00000551551	LRCH3	Q96II8	777 aa		10.28	□□□□□ -0.76
ATXN2-223	ENST00000551551	ALG1	Q9BT22	464 aa		10.28	□□□□□ -0.76
ATXN2-223	ENST00000551551	ANO3	Q9BYT9	981 aa		10.28	□□□□□ -0.76
ATXN2-223	ENST00000551551	ZNF576	Q9H609	170 aa		10.28	□□□□□ -0.76
ATXN2-223	ENST00000551551	UPF2	Q9HAU5	1272 aa	Known RBP	10.28	□□□□□ -0.76
ATXN2-223	ENST00000551551	FAM217B	Q9NTX9	383 aa	Predicted RBP	10.28	□□□□□ -0.76
ATXN2-223	ENST00000551551	WDR70	Q9NW82	654 aa		10.28	□□□□□ -0.76
ATXN2-223	ENST00000551551	IPO5	O00410	1097 aa	Known RBP	10.27	□□□□□ -0.77
ATXN2-223	ENST00000551551	SOX1	O00570	391 aa	Predicted RBP	10.27	□□□□□ -0.77
ATXN2-223	ENST00000551551	HBP1	O60381	514 aa		10.27	□□□□□ -0.77
ATXN2-223	ENST00000551551	ATG7	O95352	703 aa		10.27	□□□□□ -0.77
ATXN2-223	ENST00000551551	CXCL10	P02778	98 aa		10.27	□□□□□ -0.77
ATXN2-223	ENST00000551551	KCNA2	P16389	499 aa		10.27	□□□□□ -0.77
ATXN2-223	ENST00000551551	DNAJB2	P25686	324 aa		10.27	□□□□□ -0.77
ATXN2-223	ENST00000551551	CDC27	P30260	824 aa		10.27	□□□□□ -0.77
ATXN2-223	ENST00000551551	HOXC8	P31273	242 aa		10.27	□□□□□ -0.77
ATXN2-223	ENST00000551551	SFN	P31947	248 aa		10.27	□□□□□ -0.77
ATXN2-223	ENST00000551551	CIITA	P33076	1130 aa		10.27	□□□□□ -0.77
ATXN2-223	ENST00000551551	STAT5B	P51692	787 aa		10.27	□□□□□ -0.77
ATXN2-223	ENST00000551551	IRX5	P78411	483 aa	Predicted RBP	10.27	□□□□□ -0.77
ATXN2-223	ENST00000551551	KRT76	Q01546	638 aa		10.27	□□□□□ -0.77
ATXN2-223	ENST00000551551	TMEM63B	Q5T3F8	832 aa		10.27	□□□□□ -0.77
ATXN2-223	ENST00000551551	GDF6	Q6KF10	455 aa	Predicted RBP	10.27	□□□□□ -0.77
ATXN2-223	ENST00000551551	ZNF746	Q6NUN9	644 aa	Predicted RBP	10.27	□□□□□ -0.77
ATXN2-223	ENST00000551551	MOXD1	Q6UVY6	613 aa		10.27	□□□□□ -0.77
ATXN2-223	ENST00000551551	C16orf59	Q7L2K0	433 aa		10.27	□□□□□ -0.77
ATXN2-223	ENST00000551551	OTOP2	Q7RTS6	562 aa		10.27	□□□□□ -0.77
ATXN2-223	ENST00000551551	SEPT8	Q92599	483 aa		10.27	□□□□□ -0.77
ATXN2-223	ENST00000551551	FAM167A	Q96KS9	214 aa		10.27	□□□□□ -0.77
ATXN2-223	ENST00000551551	RIT2	Q99578	217 aa		10.27	□□□□□ -0.77
ATXN2-223	ENST00000551551	SLC26A6	Q9BXS9	759 aa		10.27	□□□□□ -0.77
ATXN2-223	ENST00000551551	FTHL17	Q9BXU8	183 aa		10.27	□□□□□ -0.77
ATXN2-223	ENST00000551551	RNPEP	Q9H4A4	650 aa		10.27	□□□□□ -0.77
ATXN2-223	ENST00000551551	LRRC37A2	A6NM11	1700 aa		10.27	□□□□□ -0.77
ATXN2-223	ENST00000551551	KIAA1217	Q5T5P2	1943 aa		10.27	□□□□□ -0.77
ATXN2-223	ENST00000551551	SCN10A	Q9Y5Y9	1956 aa		10.26	□□□□□ -0.77
ATXN2-223	ENST00000551551	ZBBX	A8MT70	800 aa		10.26	□□□□□ -0.77
ATXN2-223	ENST00000551551	LGR5	O75473	907 aa		10.26	□□□□□ -0.77
ATXN2-223	ENST00000551551	PSAP	P07602	524 aa		10.26	□□□□□ -0.77
ATXN2-223	ENST00000551551	SMIM10L2A	P0DMW4	78 aa		10.26	□□□□□ -0.77
ATXN2-223	ENST00000551551	SMIM10L2B	P0DMW5	78 aa		10.26	□□□□□ -0.77
ATXN2-223	ENST00000551551	GCFC2	P16383	781 aa	Known RBP	10.26	□□□□□ -0.77
ATXN2-223	ENST00000551551	TMOD1	P28289	359 aa		10.26	□□□□□ -0.77
ATXN2-223	ENST00000551551	THPO	P40225	353 aa		10.26	□□□□□ -0.77
ATXN2-223	ENST00000551551	NTRK3	Q16288	839 aa		10.26	□□□□□ -0.77
ATXN2-223	ENST00000551551	PLA2G4D	Q86XP0	818 aa		10.26	□□□□□ -0.77
ATXN2-223	ENST00000551551	SLC17A8	Q8NDX2	589 aa		10.26	□□□□□ -0.77
ATXN2-223	ENST00000551551	IL31RA	Q8NI17	732 aa		10.26	□□□□□ -0.77
ATXN2-223	ENST00000551551	SYMPK	Q92797	1274 aa	Known RBP	10.26	□□□□□ -0.77
ATXN2-223	ENST00000551551	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	10.26	□□□□□ -0.77
ATXN2-223	ENST00000551551	SAMD11	Q96NU1	681 aa		10.26	□□□□□ -0.77
ATXN2-223	ENST00000551551	RAD9A	Q99638	391 aa		10.26	□□□□□ -0.77
ATXN2-223	ENST00000551551	ZBED2	Q9BTP6	218 aa		10.26	□□□□□ -0.77
ATXN2-223	ENST00000551551	WNT8A	Q9H1J5	351 aa		10.26	□□□□□ -0.77
ATXN2-223	ENST00000551551	AGO4	Q9HCK5	861 aa	Known RBP	10.26	□□□□□ -0.77
ATXN2-223	ENST00000551551	NRBP2	Q9NSY0	501 aa		10.26	□□□□□ -0.77

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