RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 CCER2I3L3R5 266 aa13.92□□□□□ -0.18
PTCH1-222ENST00000551425 GOLGA8HP0CJ92 632 aa13.92□□□□□ -0.18
PTCH1-222ENST00000551425 HSD17B4P51659 736 aa13.92□□□□□ -0.18
PTCH1-222ENST00000551425 GHRHRQ02643 423 aa13.92□□□□□ -0.18
PTCH1-222ENST00000551425 RRP12Q5JTH9 1297 aaKnown RBP13.92□□□□□ -0.18
PTCH1-222ENST00000551425 MCTP2Q6DN12 878 aa13.92□□□□□ -0.18
PTCH1-222ENST00000551425 RBM23Q86U06 439 aaKnown RBP13.92□□□□□ -0.18
PTCH1-222ENST00000551425 VSIG10LQ86VR7 867 aa13.92□□□□□ -0.18
PTCH1-222ENST00000551425 ADSSL1Q8N142 457 aa13.92□□□□□ -0.18
PTCH1-222ENST00000551425 CRIPAKQ8N1N5 446 aa13.92□□□□□ -0.18
PTCH1-222ENST00000551425 KLHL23Q8NBE8 558 aa13.92□□□□□ -0.18
PTCH1-222ENST00000551425 PDCD2LQ9BRP1 358 aa13.92□□□□□ -0.18
PTCH1-222ENST00000551425 USP26Q9BXU7 913 aa13.92□□□□□ -0.18
PTCH1-222ENST00000551425 TLE6Q9H808 572 aa13.92□□□□□ -0.18
PTCH1-222ENST00000551425 MLXIPQ9HAP2 919 aa13.92□□□□□ -0.18
PTCH1-222ENST00000551425 CCDC171Q6TFL3 1326 aa13.91□□□□□ -0.18
PTCH1-222ENST00000551425 WDR87Q6ZQQ6 2873 aa13.91□□□□□ -0.18
PTCH1-222ENST00000551425 GHRP10912 638 aa13.91□□□□□ -0.18
PTCH1-222ENST00000551425 LPIN1Q14693 890 aa13.91□□□□□ -0.18
PTCH1-222ENST00000551425 VPS53Q5VIR6 699 aa13.91□□□□□ -0.18
PTCH1-222ENST00000551425 STOX1Q6ZVD7 989 aa13.91□□□□□ -0.18
PTCH1-222ENST00000551425 FRMD5Q7Z6J6 570 aa13.91□□□□□ -0.18
PTCH1-222ENST00000551425 UBALD2Q8IYN6 164 aa13.91□□□□□ -0.18
PTCH1-222ENST00000551425 ADGRF4Q8IZF3 695 aa13.91□□□□□ -0.18
PTCH1-222ENST00000551425 TMEM105Q8N8V8 129 aa13.91□□□□□ -0.18
PTCH1-222ENST00000551425 CDCA3Q99618 268 aaPredicted RBP13.91□□□□□ -0.18
PTCH1-222ENST00000551425 MAP3K20Q9NYL2 800 aaKnown RBP13.91□□□□□ -0.18
PTCH1-222ENST00000551425 TTC41PQ6P2S7 1318 aa13.9□□□□□ -0.18
PTCH1-222ENST00000551425 OPLAHO14841 1288 aa13.9□□□□□ -0.18
PTCH1-222ENST00000551425 CFBP00751 764 aa13.9□□□□□ -0.18
PTCH1-222ENST00000551425 MYCLP12524 364 aaPredicted RBP13.9□□□□□ -0.18
PTCH1-222ENST00000551425 MGAT3Q09327 533 aa13.9□□□□□ -0.18
PTCH1-222ENST00000551425 QRICH1Q2TAL8 776 aa13.9□□□□□ -0.18
PTCH1-222ENST00000551425 ZBTB33Q86T24 672 aa13.9□□□□□ -0.18
PTCH1-222ENST00000551425 VN1R2Q8NFZ6 395 aa13.9□□□□□ -0.18
PTCH1-222ENST00000551425 LMBR1Q8WVP7 490 aa13.9□□□□□ -0.18
PTCH1-222ENST00000551425 S1PR5Q9H228 398 aa13.9□□□□□ -0.18
PTCH1-222ENST00000551425 PCDHGC5Q9Y5F6 944 aa13.9□□□□□ -0.18
PTCH1-222ENST00000551425 DMDP11532 3685 aa13.9□□□□□ -0.18
PTCH1-222ENST00000551425 ZNF292O60281 2723 aa13.9□□□□□ -0.18
PTCH1-222ENST00000551425 NOP56O00567 594 aaKnown RBP13.89□□□□□ -0.19
PTCH1-222ENST00000551425 PCP11498 1178 aaKnown RBP13.89□□□□□ -0.19
PTCH1-222ENST00000551425 ARHGAP4P98171 946 aa13.89□□□□□ -0.19
PTCH1-222ENST00000551425 UBE3AQ05086 875 aa13.89□□□□□ -0.19
PTCH1-222ENST00000551425 PGM5Q15124 567 aa13.89□□□□□ -0.19
PTCH1-222ENST00000551425 DUSP6Q16828 381 aa13.89□□□□□ -0.19
PTCH1-222ENST00000551425 TAF2Q6P1X5 1199 aa13.89□□□□□ -0.19
PTCH1-222ENST00000551425 TMEM184AQ6ZMB5 413 aa13.89□□□□□ -0.19
PTCH1-222ENST00000551425 DGKHQ86XP1 1220 aa13.89□□□□□ -0.19
PTCH1-222ENST00000551425 NPAS4Q8IUM7 802 aa13.89□□□□□ -0.19
PTCH1-222ENST00000551425 KREMEN2Q8NCW0 462 aa13.89□□□□□ -0.19
PTCH1-222ENST00000551425 IL31RAQ8NI17 732 aa13.89□□□□□ -0.19
PTCH1-222ENST00000551425 PI4K2BQ8TCG2 481 aa13.89□□□□□ -0.19
PTCH1-222ENST00000551425 GPKOWQ92917 476 aaPredicted RBP eCLIP13.89□□□□□ -0.19
PTCH1-222ENST00000551425 NEK1Q96PY6 1258 aa13.89□□□□□ -0.19
PTCH1-222ENST00000551425 MYH7BA7E2Y1 1941 aa13.89□□□□□ -0.19
PTCH1-222ENST00000551425 NRCAMQ92823 1304 aa13.89□□□□□ -0.19
PTCH1-222ENST00000551425 TTC3P53804 2025 aa13.88□□□□□ -0.19
PTCH1-222ENST00000551425 PER2O15055 1255 aa13.88□□□□□ -0.19
PTCH1-222ENST00000551425 FGAP02671 866 aa13.88□□□□□ -0.19
PTCH1-222ENST00000551425 RBM10P98175 930 aaKnown RBP13.88□□□□□ -0.19
PTCH1-222ENST00000551425 MTMR3Q13615 1198 aa13.88□□□□□ -0.19
PTCH1-222ENST00000551425 ASPRV1Q53RT3 343 aa13.88□□□□□ -0.19
PTCH1-222ENST00000551425 FBXO47Q5MNV8 452 aa13.88□□□□□ -0.19
PTCH1-222ENST00000551425 ASTLQ6HA08 431 aaPredicted RBP13.88□□□□□ -0.19
PTCH1-222ENST00000551425 TSHZ1Q6ZSZ6 1077 aa13.88□□□□□ -0.19
PTCH1-222ENST00000551425 SAMD3Q8N6K7 520 aa13.88□□□□□ -0.19
PTCH1-222ENST00000551425 LINC01599Q8WXQ3 324 aa13.88□□□□□ -0.19
PTCH1-222ENST00000551425 GPR20Q99678 358 aa13.88□□□□□ -0.19
PTCH1-222ENST00000551425 BCAS3Q9H6U6 928 aa13.88□□□□□ -0.19
PTCH1-222ENST00000551425 DCTPP1Q9H773 170 aa13.88□□□□□ -0.19
PTCH1-222ENST00000551425 ZNF215Q9UL58 517 aaPredicted RBP13.88□□□□□ -0.19
PTCH1-222ENST00000551425 SORCS3Q9UPU3 1222 aa13.88□□□□□ -0.19
PTCH1-222ENST00000551425 MED19A0JLT2 244 aaPredicted RBP13.87□□□□□ -0.19
PTCH1-222ENST00000551425 BRD1O95696 1058 aa13.87□□□□□ -0.19
PTCH1-222ENST00000551425 SRGAP2BP0DMP2 458 aa13.87□□□□□ -0.19
PTCH1-222ENST00000551425 CCND2P30279 289 aa13.87□□□□□ -0.19
PTCH1-222ENST00000551425 KCNC3Q14003 757 aa13.87□□□□□ -0.19
PTCH1-222ENST00000551425 PDE12Q6L8Q7 609 aaKnown RBP13.87□□□□□ -0.19
PTCH1-222ENST00000551425 METTL7BQ6UX53 244 aa13.87□□□□□ -0.19
PTCH1-222ENST00000551425 RUFY4Q6ZNE9 571 aa13.87□□□□□ -0.19
PTCH1-222ENST00000551425 RSPH3Q86UC2 560 aa13.87□□□□□ -0.19
PTCH1-222ENST00000551425 RTN4RL1Q86UN2 441 aaPredicted RBP13.87□□□□□ -0.19
PTCH1-222ENST00000551425 TRIM50Q86XT4 487 aa13.87□□□□□ -0.19
PTCH1-222ENST00000551425 PNMA1Q8ND90 353 aa13.87□□□□□ -0.19
PTCH1-222ENST00000551425 MICAL1Q8TDZ2 1067 aa13.87□□□□□ -0.19
PTCH1-222ENST00000551425 AMNQ9BXJ7 453 aa13.87□□□□□ -0.19
PTCH1-222ENST00000551425 JMJD4Q9H9V9 463 aa13.87□□□□□ -0.19
PTCH1-222ENST00000551425 NR2E1Q9Y466 385 aa13.87□□□□□ -0.19
PTCH1-222ENST00000551425 SUPT16HQ9Y5B9 1047 aaKnown RBP13.87□□□□□ -0.19
PTCH1-222ENST00000551425 ZMYM6O95789 1325 aa13.87□□□□□ -0.19
PTCH1-222ENST00000551425 DMXL1Q9Y485 3027 aa13.86□□□□□ -0.19
PTCH1-222ENST00000551425 STAG3L1P0CL83 205 aa13.86□□□□□ -0.19
PTCH1-222ENST00000551425 CLCN5P51795 746 aa13.86□□□□□ -0.19
PTCH1-222ENST00000551425 NEDD9Q14511 834 aa13.86□□□□□ -0.19
PTCH1-222ENST00000551425 PAN2Q504Q3 1202 aaKnown RBP13.86□□□□□ -0.19
PTCH1-222ENST00000551425 ANKRD54Q6NXT1 300 aa13.86□□□□□ -0.19
PTCH1-222ENST00000551425 SYCE2Q6PIF2 218 aa13.86□□□□□ -0.19
PTCH1-222ENST00000551425 MFSD6Q6ZSS7 791 aa13.86□□□□□ -0.19
PTCH1-222ENST00000551425 MIER1Q8N108 512 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms