RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 ABCC8Q09428 1581 aa4.39□□□□□ -1.71
CCNT1-203ENST00000550457 SLC27A2O14975 620 aa4.38□□□□□ -1.71
CCNT1-203ENST00000550457 FZD7O75084 574 aa4.38□□□□□ -1.71
CCNT1-203ENST00000550457 KLF10Q13118 480 aa4.38□□□□□ -1.71
CCNT1-203ENST00000550457 TTLL11Q8NHH1 800 aa4.38□□□□□ -1.71
CCNT1-203ENST00000550457 UBE2Q2Q8WVN8 375 aa4.38□□□□□ -1.71
CCNT1-203ENST00000550457 MRRFQ96E11 262 aaKnown RBP4.38□□□□□ -1.71
CCNT1-203ENST00000550457 GNRHR2Q96P88 292 aa4.38□□□□□ -1.71
CCNT1-203ENST00000550457 MENTQ9BUN1 341 aa4.38□□□□□ -1.71
CCNT1-203ENST00000550457 BARX1Q9HBU1 254 aaPredicted RBP4.38□□□□□ -1.71
CCNT1-203ENST00000550457 ING1Q9UK53 422 aaPredicted RBP4.38□□□□□ -1.71
CCNT1-203ENST00000550457 NOP58Q9Y2X3 529 aaKnown RBP4.38□□□□□ -1.71
CCNT1-203ENST00000550457 CCNB3Q8WWL7 1395 aa4.38□□□□□ -1.71
CCNT1-203ENST00000550457 MAP3K1Q13233 1512 aa4.37□□□□□ -1.71
CCNT1-203ENST00000550457 SMARCA2P51531 1590 aa4.37□□□□□ -1.71
CCNT1-203ENST00000550457 MUSKO15146 869 aa4.37□□□□□ -1.71
CCNT1-203ENST00000550457 FOXS1O43638 330 aa4.37□□□□□ -1.71
CCNT1-203ENST00000550457 DDAH1O94760 285 aa4.37□□□□□ -1.71
CCNT1-203ENST00000550457 KNG1P01042 644 aa4.37□□□□□ -1.71
CCNT1-203ENST00000550457 LTFP02788 710 aa4.37□□□□□ -1.71
CCNT1-203ENST00000550457 Q6ZUG5 572 aa4.37□□□□□ -1.71
CCNT1-203ENST00000550457 CCSER2Q9H7U1 834 aa4.37□□□□□ -1.71
CCNT1-203ENST00000550457 SLC6A20Q9NP91 592 aa4.37□□□□□ -1.71
CCNT1-203ENST00000550457 TCAF1Q9Y4C2 921 aa4.37□□□□□ -1.71
CCNT1-203ENST00000550457 TELO2Q9Y4R8 837 aa4.37□□□□□ -1.71
CCNT1-203ENST00000550457 HS3ST3A1Q9Y663 406 aa4.37□□□□□ -1.71
CCNT1-203ENST00000550457 ERICH3Q5RHP9 1530 aa4.36□□□□□ -1.71
CCNT1-203ENST00000550457 UNCXA6NJT0 531 aa4.36□□□□□ -1.71
CCNT1-203ENST00000550457 CKMP06732 381 aa4.36□□□□□ -1.71
CCNT1-203ENST00000550457 CSF2RBP32927 897 aa4.36□□□□□ -1.71
CCNT1-203ENST00000550457 ETFBP38117 255 aa4.36□□□□□ -1.71
CCNT1-203ENST00000550457 ANP32AP39687 249 aaKnown RBP4.36□□□□□ -1.71
CCNT1-203ENST00000550457 MAP4K2Q12851 820 aa4.36□□□□□ -1.71
CCNT1-203ENST00000550457 SMAD2Q15796 467 aaKnown RBP4.36□□□□□ -1.71
CCNT1-203ENST00000550457 SLC10A6Q3KNW5 377 aa4.36□□□□□ -1.71
CCNT1-203ENST00000550457 VASNQ6EMK4 673 aa4.36□□□□□ -1.71
CCNT1-203ENST00000550457 CYP4F22Q6NT55 531 aa4.36□□□□□ -1.71
CCNT1-203ENST00000550457 TCTN3Q6NUS6 607 aa4.36□□□□□ -1.71
CCNT1-203ENST00000550457 GPR155Q7Z3F1 870 aa4.36□□□□□ -1.71
CCNT1-203ENST00000550457 RALYLQ86SE5 291 aaKnown RBP4.36□□□□□ -1.71
CCNT1-203ENST00000550457 AJUBAQ96IF1 538 aa4.36□□□□□ -1.71
CCNT1-203ENST00000550457 SEC61A2Q9H9S3 476 aa4.36□□□□□ -1.71
CCNT1-203ENST00000550457 DLL4Q9NR61 685 aa4.36□□□□□ -1.71
CCNT1-203ENST00000550457 GPR27Q9NS67 375 aa4.36□□□□□ -1.71
CCNT1-203ENST00000550457 PRKAG3Q9UGI9 489 aa4.36□□□□□ -1.71
CCNT1-203ENST00000550457 PTPN22Q9Y2R2 807 aa4.36□□□□□ -1.71
CCNT1-203ENST00000550457 TESMINQ9Y4I5 508 aa4.36□□□□□ -1.71
CCNT1-203ENST00000550457 SLC4A7Q9Y6M7 1214 aa4.36□□□□□ -1.71
CCNT1-203ENST00000550457 SETD5Q9C0A6 1442 aa4.36□□□□□ -1.71
CCNT1-203ENST00000550457 A0A1W2PQU0 124 aa4.35□□□□□ -1.71
CCNT1-203ENST00000550457 KRIT1O00522 736 aa4.35□□□□□ -1.71
CCNT1-203ENST00000550457 DLX3O60479 287 aa4.35□□□□□ -1.71
CCNT1-203ENST00000550457 MAFKO60675 156 aa4.35□□□□□ -1.71
CCNT1-203ENST00000550457 GJB6O95452 261 aa4.35□□□□□ -1.71
CCNT1-203ENST00000550457 COL6A2P12110 1019 aa4.35□□□□□ -1.71
CCNT1-203ENST00000550457 GLRBP48167 497 aa4.35□□□□□ -1.71
CCNT1-203ENST00000550457 PPP2R2AP63151 447 aa4.35□□□□□ -1.71
CCNT1-203ENST00000550457 DDX10Q13206 875 aaKnown RBP4.35□□□□□ -1.71
CCNT1-203ENST00000550457 TUSC3Q13454 348 aa4.35□□□□□ -1.71
CCNT1-203ENST00000550457 SKIDA1Q1XH10 827 aa4.35□□□□□ -1.71
CCNT1-203ENST00000550457 PAN2Q504Q3 1202 aaKnown RBP4.35□□□□□ -1.71
CCNT1-203ENST00000550457 TNNI3KQ59H18 835 aa4.35□□□□□ -1.71
CCNT1-203ENST00000550457 OTOP3Q7RTS5 596 aa4.35□□□□□ -1.71
CCNT1-203ENST00000550457 TRIM48Q8IWZ4 208 aa4.35□□□□□ -1.71
CCNT1-203ENST00000550457 STPG3Q8N7X2 389 aa4.35□□□□□ -1.71
CCNT1-203ENST00000550457 IER2Q9BTL4 223 aa4.35□□□□□ -1.71
CCNT1-203ENST00000550457 PHF20Q9BVI0 1012 aa4.35□□□□□ -1.71
CCNT1-203ENST00000550457 SLITRK6Q9H5Y7 841 aa4.35□□□□□ -1.71
CCNT1-203ENST00000550457 KCND1Q9NSA2 647 aa4.35□□□□□ -1.71
CCNT1-203ENST00000550457 ZFP69BQ9UJL9 534 aa4.35□□□□□ -1.71
CCNT1-203ENST00000550457 NKRFO15226 690 aaKnown RBP eCLIP4.34□□□□□ -1.71
CCNT1-203ENST00000550457 IL18BPO95998 194 aa4.34□□□□□ -1.71
CCNT1-203ENST00000550457 CHGBP05060 677 aa4.34□□□□□ -1.71
CCNT1-203ENST00000550457 FAHP16930 419 aa4.34□□□□□ -1.71
CCNT1-203ENST00000550457 FXNQ16595 210 aa4.34□□□□□ -1.71
CCNT1-203ENST00000550457 CRB2Q5IJ48 1285 aa4.34□□□□□ -1.71
CCNT1-203ENST00000550457 HABP4Q5JVS0 413 aaKnown RBP4.34□□□□□ -1.71
CCNT1-203ENST00000550457 IGFL4Q6B9Z1 124 aa4.34□□□□□ -1.71
CCNT1-203ENST00000550457 USP51Q70EK9 711 aa4.34□□□□□ -1.71
CCNT1-203ENST00000550457 KCTD13Q8WZ19 329 aa4.34□□□□□ -1.71
CCNT1-203ENST00000550457 IPO9Q96P70 1041 aaKnown RBP4.34□□□□□ -1.71
CCNT1-203ENST00000550457 LRRC37BQ96QE4 947 aa4.34□□□□□ -1.71
CCNT1-203ENST00000550457 LMF1Q96S06 567 aa4.34□□□□□ -1.71
CCNT1-203ENST00000550457 PDGFDQ9GZP0 370 aaPredicted RBP4.34□□□□□ -1.71
CCNT1-203ENST00000550457 SEMA4AQ9H3S1 761 aa4.34□□□□□ -1.71
CCNT1-203ENST00000550457 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.34□□□□□ -1.71
CCNT1-203ENST00000550457 RUSC2Q8N2Y8 1516 aa4.34□□□□□ -1.71
CCNT1-203ENST00000550457 SMARCA4P51532 1647 aa4.33□□□□□ -1.72
CCNT1-203ENST00000550457 MAPKBP1O60336 1514 aa4.33□□□□□ -1.72
CCNT1-203ENST00000550457 RAB3GAP2Q9H2M9 1393 aa4.33□□□□□ -1.72
CCNT1-203ENST00000550457 WASHC2AQ641Q2 1341 aa4.33□□□□□ -1.72
CCNT1-203ENST00000550457 ZBTB7CA1YPR0 619 aa4.33□□□□□ -1.72
CCNT1-203ENST00000550457 PPM1GO15355 546 aaPredicted RBP4.33□□□□□ -1.72
CCNT1-203ENST00000550457 FBXO21O94952 628 aa4.33□□□□□ -1.72
CCNT1-203ENST00000550457 SSBP05455 408 aaKnown RBP eCLIP4.33□□□□□ -1.72
CCNT1-203ENST00000550457 ZNF888P0CJ79 500 aaPredicted RBP4.33□□□□□ -1.72
CCNT1-203ENST00000550457 PFKPQ01813 784 aa4.33□□□□□ -1.72
CCNT1-203ENST00000550457 CD276Q5ZPR3 534 aa4.33□□□□□ -1.72
CCNT1-203ENST00000550457 KCNT2Q6UVM3 1135 aa4.33□□□□□ -1.72
CCNT1-203ENST00000550457 USP53Q70EK8 1073 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms