RNA–Protein interactions for RNA: ENST00000550069.1

PFDN5-209, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-209ENST00000550069 COL15A1P39059 1388 aa6.86□□□□□ -1.31
PFDN5-209ENST00000550069 USP42Q9H9J4 1324 aaKnown RBP6.86□□□□□ -1.31
PFDN5-209ENST00000550069 NUP98P52948 1817 aa6.86□□□□□ -1.31
PFDN5-209ENST00000550069 ZNF503-AS2A6NEH8 195 aa6.86□□□□□ -1.31
PFDN5-209ENST00000550069 USP2O75604 605 aaPredicted RBP6.86□□□□□ -1.31
PFDN5-209ENST00000550069 SLC7A5Q01650 507 aa6.86□□□□□ -1.31
PFDN5-209ENST00000550069 ITPK1Q13572 414 aa6.86□□□□□ -1.31
PFDN5-209ENST00000550069 KIR3DS1Q14943 382 aa6.86□□□□□ -1.31
PFDN5-209ENST00000550069 HSP90AB3PQ58FF7 597 aa6.86□□□□□ -1.31
PFDN5-209ENST00000550069 MRM1Q6IN84 353 aaKnown RBP6.86□□□□□ -1.31
PFDN5-209ENST00000550069 C6orf15Q6UXA7 325 aaPredicted RBP6.86□□□□□ -1.31
PFDN5-209ENST00000550069 MCM10Q7L590 875 aa6.86□□□□□ -1.31
PFDN5-209ENST00000550069 FIBCD1Q8N539 461 aa6.86□□□□□ -1.31
PFDN5-209ENST00000550069 LINC00116Q8NCU8 138 aa6.86□□□□□ -1.31
PFDN5-209ENST00000550069 HNRNPLLQ8WVV9 542 aaKnown RBP6.86□□□□□ -1.31
PFDN5-209ENST00000550069 LINC01599Q8WXQ3 324 aa6.86□□□□□ -1.31
PFDN5-209ENST00000550069 FAM168AQ92567 244 aa6.86□□□□□ -1.31
PFDN5-209ENST00000550069 NOL6Q9H6R4 1146 aaKnown RBP6.86□□□□□ -1.31
PFDN5-209ENST00000550069 PHAXQ9H814 394 aaKnown RBP6.86□□□□□ -1.31
PFDN5-209ENST00000550069 KCNK12Q9HB15 430 aa6.86□□□□□ -1.31
PFDN5-209ENST00000550069 NRXN2Q9P2S2 1712 aa6.86□□□□□ -1.31
PFDN5-209ENST00000550069 SCN7AQ01118 1682 aa6.86□□□□□ -1.31
PFDN5-209ENST00000550069 CHD4Q14839 1912 aa6.86□□□□□ -1.31
PFDN5-209ENST00000550069 HPXP02790 462 aa6.85□□□□□ -1.31
PFDN5-209ENST00000550069 TGFB2P61812 414 aa6.85□□□□□ -1.31
PFDN5-209ENST00000550069 PPP2R5DQ14738 602 aa6.85□□□□□ -1.31
PFDN5-209ENST00000550069 ZNF827Q17R98 1081 aa6.85□□□□□ -1.31
PFDN5-209ENST00000550069 ANKRD39Q53RE8 183 aa6.85□□□□□ -1.31
PFDN5-209ENST00000550069 LARP1BQ659C4 914 aaKnown RBP6.85□□□□□ -1.31
PFDN5-209ENST00000550069 RNF111Q6ZNA4 994 aa6.85□□□□□ -1.31
PFDN5-209ENST00000550069 COL23A1Q86Y22 540 aaPredicted RBP6.85□□□□□ -1.31
PFDN5-209ENST00000550069 DNAJC10Q8IXB1 793 aa6.85□□□□□ -1.31
PFDN5-209ENST00000550069 CELF2-AS1Q8N7Q2 184 aa6.85□□□□□ -1.31
PFDN5-209ENST00000550069 SLC43A3Q8NBI5 491 aa6.85□□□□□ -1.31
PFDN5-209ENST00000550069 LIN37Q96GY3 246 aaPredicted RBP6.85□□□□□ -1.31
PFDN5-209ENST00000550069 ZDHHC15Q96MV8 337 aa6.85□□□□□ -1.31
PFDN5-209ENST00000550069 GMLQ99445 158 aa6.85□□□□□ -1.31
PFDN5-209ENST00000550069 DDX21Q9NR30 783 aaKnown RBP eCLIP6.85□□□□□ -1.31
PFDN5-209ENST00000550069 AP5S1Q9NUS5 200 aa6.85□□□□□ -1.31
PFDN5-209ENST00000550069 HYPKQ9NX55 129 aa6.85□□□□□ -1.31
PFDN5-209ENST00000550069 DBF4Q9UBU7 674 aaPredicted RBP6.85□□□□□ -1.31
PFDN5-209ENST00000550069 PRKAG3Q9UGI9 489 aa6.85□□□□□ -1.31
PFDN5-209ENST00000550069 RIC1Q4ADV7 1423 aa6.84□□□□□ -1.31
PFDN5-209ENST00000550069 ZNF205O95201 554 aa6.84□□□□□ -1.31
PFDN5-209ENST00000550069 IFNGR1P15260 489 aa6.84□□□□□ -1.31
PFDN5-209ENST00000550069 VAV1P15498 845 aa6.84□□□□□ -1.31
PFDN5-209ENST00000550069 BMP8BP34820 402 aa6.84□□□□□ -1.31
PFDN5-209ENST00000550069 PCBP3P57721 371 aaKnown RBP6.84□□□□□ -1.31
PFDN5-209ENST00000550069 SLC39A6Q13433 755 aa6.84□□□□□ -1.31
PFDN5-209ENST00000550069 GNL2Q13823 731 aaKnown RBP6.84□□□□□ -1.31
PFDN5-209ENST00000550069 PARP10Q53GL7 1025 aa6.84□□□□□ -1.31
PFDN5-209ENST00000550069 CCDC30Q5VVM6 783 aa6.84□□□□□ -1.31
PFDN5-209ENST00000550069 VPS37DQ86XT2 251 aa6.84□□□□□ -1.31
PFDN5-209ENST00000550069 KIRREL1Q96J84 757 aa6.84□□□□□ -1.31
PFDN5-209ENST00000550069 HHIPL1Q96JK4 782 aa6.84□□□□□ -1.31
PFDN5-209ENST00000550069 DSCC1Q9BVC3 393 aa6.84□□□□□ -1.31
PFDN5-209ENST00000550069 SLC12A9Q9BXP2 914 aa6.84□□□□□ -1.31
PFDN5-209ENST00000550069 NYXQ9GZU5 481 aa6.84□□□□□ -1.31
PFDN5-209ENST00000550069 RNF32Q9H0A6 362 aa6.84□□□□□ -1.31
PFDN5-209ENST00000550069 ERVK13-1Q9NX77 482 aa6.84□□□□□ -1.31
PFDN5-209ENST00000550069 PPP1R1BQ9UD71 204 aaPredicted RBP6.84□□□□□ -1.31
PFDN5-209ENST00000550069 FHOD1Q9Y613 1164 aa6.84□□□□□ -1.31
PFDN5-209ENST00000550069 ANKRD36CQ5JPF3 1778 aa6.84□□□□□ -1.31
PFDN5-209ENST00000550069 ATP10DQ9P241 1426 aa6.84□□□□□ -1.32
PFDN5-209ENST00000550069 ZNF521Q96K83 1311 aa6.83□□□□□ -1.32
PFDN5-209ENST00000550069 PSPNO60542 156 aa6.83□□□□□ -1.32
PFDN5-209ENST00000550069 DDX58O95786 925 aaKnown RBP6.83□□□□□ -1.32
PFDN5-209ENST00000550069 GYS1P13807 737 aa6.83□□□□□ -1.32
PFDN5-209ENST00000550069 JUNBP17275 347 aaPredicted RBP6.83□□□□□ -1.32
PFDN5-209ENST00000550069 NOL9Q5SY16 702 aaKnown RBP6.83□□□□□ -1.32
PFDN5-209ENST00000550069 KIF6Q6ZMV9 814 aa6.83□□□□□ -1.32
PFDN5-209ENST00000550069 ZSWIM9Q86XI8 627 aa6.83□□□□□ -1.32
PFDN5-209ENST00000550069 TMEM52Q8NDY8 209 aa6.83□□□□□ -1.32
PFDN5-209ENST00000550069 SHISA4Q96DD7 197 aa6.83□□□□□ -1.32
PFDN5-209ENST00000550069 ACTR10Q9NZ32 417 aa6.83□□□□□ -1.32
PFDN5-209ENST00000550069 RNF114Q9Y508 228 aa6.83□□□□□ -1.32
PFDN5-209ENST00000550069 ARFGEF1Q9Y6D6 1849 aa6.83□□□□□ -1.32
PFDN5-209ENST00000550069 CARMIL3Q8ND23 1372 aa6.82□□□□□ -1.32
PFDN5-209ENST00000550069 TBX1O43435 398 aa6.82□□□□□ -1.32
PFDN5-209ENST00000550069 VAMP4O75379 141 aa6.82□□□□□ -1.32
PFDN5-209ENST00000550069 TM4SF1P30408 202 aa6.82□□□□□ -1.32
PFDN5-209ENST00000550069 KCNMB1Q16558 191 aa6.82□□□□□ -1.32
PFDN5-209ENST00000550069 HEATR6Q6AI08 1181 aaKnown RBP6.82□□□□□ -1.32
PFDN5-209ENST00000550069 CCDC146Q8IYE0 955 aa6.82□□□□□ -1.32
PFDN5-209ENST00000550069 MAP6Q96JE9 813 aa6.82□□□□□ -1.32
PFDN5-209ENST00000550069 PLCD4Q9BRC7 762 aa6.82□□□□□ -1.32
PFDN5-209ENST00000550069 CDADC1Q9BWV3 514 aa6.82□□□□□ -1.32
PFDN5-209ENST00000550069 STK31Q9BXU1 1019 aa6.82□□□□□ -1.32
PFDN5-209ENST00000550069 PRR13Q9NZ81 148 aa6.82□□□□□ -1.32
PFDN5-209ENST00000550069 CGGBP1Q9UFW8 167 aaPredicted RBP6.82□□□□□ -1.32
PFDN5-209ENST00000550069 ZMYM5Q9UJ78 669 aa6.82□□□□□ -1.32
PFDN5-209ENST00000550069 ZBTB1Q9Y2K1 713 aa6.82□□□□□ -1.32
PFDN5-209ENST00000550069 GPR55Q9Y2T6 319 aaPredicted RBP6.82□□□□□ -1.32
PFDN5-209ENST00000550069 USP16Q9Y5T5 823 aa6.82□□□□□ -1.32
PFDN5-209ENST00000550069 SLC12A7Q9Y666 1083 aa6.82□□□□□ -1.32
PFDN5-209ENST00000550069 AFDNP55196 1824 aaKnown RBP6.82□□□□□ -1.32
PFDN5-209ENST00000550069 DLEC1Q9Y238 1755 aa6.82□□□□□ -1.32
PFDN5-209ENST00000550069 BRCA1P38398 1863 aaKnown RBP6.81□□□□□ -1.32
PFDN5-209ENST00000550069 MAP3K15Q6ZN16 1313 aa6.81□□□□□ -1.32
PFDN5-209ENST00000550069 GSTM1P09488 218 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms