RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 PAPD7Q5XG87 772 aaKnown RBP9.87□□□□□ -0.83
TMEM116-209ENST00000550020 PDXDC1Q6P996 788 aa9.87□□□□□ -0.83
TMEM116-209ENST00000550020 RRAGAQ7L523 313 aa9.87□□□□□ -0.83
TMEM116-209ENST00000550020 NIPA1Q7RTP0 329 aa9.87□□□□□ -0.83
TMEM116-209ENST00000550020 TRIM59Q8IWR1 403 aa9.87□□□□□ -0.83
TMEM116-209ENST00000550020 RNF10Q8N5U6 811 aaKnown RBP9.87□□□□□ -0.83
TMEM116-209ENST00000550020 MSANTD4Q8NCY6 345 aa9.87□□□□□ -0.83
TMEM116-209ENST00000550020 GOLGA5Q8TBA6 731 aa9.87□□□□□ -0.83
TMEM116-209ENST00000550020 LPAR1Q92633 364 aa9.87□□□□□ -0.83
TMEM116-209ENST00000550020 HOOK2Q96ED9 719 aa9.87□□□□□ -0.83
TMEM116-209ENST00000550020 NACC1Q96RE7 527 aa9.87□□□□□ -0.83
TMEM116-209ENST00000550020 CAMKK2Q96RR4 588 aa9.87□□□□□ -0.83
TMEM116-209ENST00000550020 GMLQ99445 158 aa9.87□□□□□ -0.83
TMEM116-209ENST00000550020 RIT2Q99578 217 aa9.87□□□□□ -0.83
TMEM116-209ENST00000550020 DEFB129Q9H1M3 183 aa9.87□□□□□ -0.83
TMEM116-209ENST00000550020 ZHX3Q9H4I2 956 aa9.87□□□□□ -0.83
TMEM116-209ENST00000550020 OLFML3Q9NRN5 406 aa9.87□□□□□ -0.83
TMEM116-209ENST00000550020 FAM207AQ9NSI2 230 aaPredicted RBP9.87□□□□□ -0.83
TMEM116-209ENST00000550020 TYW1Q9NV66 732 aaKnown RBP9.87□□□□□ -0.83
TMEM116-209ENST00000550020 FAM53CQ9NYF3 392 aa9.87□□□□□ -0.83
TMEM116-209ENST00000550020 ARMCX3Q9UH62 379 aaPredicted RBP9.87□□□□□ -0.83
TMEM116-209ENST00000550020 JRKLQ9Y4A0 524 aa9.87□□□□□ -0.83
TMEM116-209ENST00000550020 MYH4Q9Y623 1939 aa9.87□□□□□ -0.83
TMEM116-209ENST00000550020 POTEFA5A3E0 1075 aa9.86□□□□□ -0.83
TMEM116-209ENST00000550020 YDJCA8MPS7 323 aa9.86□□□□□ -0.83
TMEM116-209ENST00000550020 FANCGO15287 622 aa9.86□□□□□ -0.83
TMEM116-209ENST00000550020 MSH4O15457 936 aa9.86□□□□□ -0.83
TMEM116-209ENST00000550020 GAS7O60861 476 aa9.86□□□□□ -0.83
TMEM116-209ENST00000550020 FAM13AO94988 1023 aa9.86□□□□□ -0.83
TMEM116-209ENST00000550020 ZRANB2O95218 330 aaKnown RBP eCLIP9.86□□□□□ -0.83
TMEM116-209ENST00000550020 POTEIP0CG38 1075 aa9.86□□□□□ -0.83
TMEM116-209ENST00000550020 EPB41P11171 864 aaKnown RBP9.86□□□□□ -0.83
TMEM116-209ENST00000550020 TCP1P17987 556 aaKnown RBP9.86□□□□□ -0.83
TMEM116-209ENST00000550020 CAP2P40123 477 aa9.86□□□□□ -0.83
TMEM116-209ENST00000550020 BAG6P46379 1132 aa9.86□□□□□ -0.83
TMEM116-209ENST00000550020 PRELPP51888 382 aa9.86□□□□□ -0.83
TMEM116-209ENST00000550020 KIF11P52732 1056 aa9.86□□□□□ -0.83
TMEM116-209ENST00000550020 HERVK_113P62684 666 aa9.86□□□□□ -0.83
TMEM116-209ENST00000550020 ALCAMQ13740 583 aa9.86□□□□□ -0.83
TMEM116-209ENST00000550020 GIT2Q14161 759 aa9.86□□□□□ -0.83
TMEM116-209ENST00000550020 LRRC41Q15345 812 aa9.86□□□□□ -0.83
TMEM116-209ENST00000550020 NFIL3Q16649 462 aa9.86□□□□□ -0.83
TMEM116-209ENST00000550020 IFI16Q16666 785 aaKnown RBP9.86□□□□□ -0.83
TMEM116-209ENST00000550020 FAM83BQ5T0W9 1011 aa9.86□□□□□ -0.83
TMEM116-209ENST00000550020 LRCH2Q5VUJ6 765 aa9.86□□□□□ -0.83
TMEM116-209ENST00000550020 CC2D1AQ6P1N0 951 aaPredicted RBP9.86□□□□□ -0.83
TMEM116-209ENST00000550020 POTEGQ6S5H5 508 aa9.86□□□□□ -0.83
TMEM116-209ENST00000550020 POTEEQ6S8J3 1075 aa9.86□□□□□ -0.83
TMEM116-209ENST00000550020 TRAPPC11Q7Z392 1133 aa9.86□□□□□ -0.83
TMEM116-209ENST00000550020 VPS36Q86VN1 386 aa9.86□□□□□ -0.83
TMEM116-209ENST00000550020 MSL3Q8N5Y2 521 aaKnown RBP9.86□□□□□ -0.83
TMEM116-209ENST00000550020 CAGE1Q8TC20 777 aa9.86□□□□□ -0.83
TMEM116-209ENST00000550020 SLC5A5Q92911 643 aa9.86□□□□□ -0.83
TMEM116-209ENST00000550020 HPS3Q969F9 1004 aa9.86□□□□□ -0.83
TMEM116-209ENST00000550020 PURBQ96QR8 312 aaKnown RBP9.86□□□□□ -0.83
TMEM116-209ENST00000550020 EIF2AK1Q9BQI3 630 aaKnown RBP9.86□□□□□ -0.83
TMEM116-209ENST00000550020 TEKT3Q9BXF9 490 aa9.86□□□□□ -0.83
TMEM116-209ENST00000550020 PARD6BQ9BYG5 372 aa9.86□□□□□ -0.83
TMEM116-209ENST00000550020 IRX2Q9BZI1 471 aaPredicted RBP9.86□□□□□ -0.83
TMEM116-209ENST00000550020 TNS1Q9HBL0 1735 aaKnown RBP9.86□□□□□ -0.83
TMEM116-209ENST00000550020 RNF14Q9UBS8 474 aa9.86□□□□□ -0.83
TMEM116-209ENST00000550020 PUF60Q9UHX1 559 aaKnown RBP9.86□□□□□ -0.83
TMEM116-209ENST00000550020 VAV3Q9UKW4 847 aa9.86□□□□□ -0.83
TMEM116-209ENST00000550020 RAB21Q9UL25 225 aa9.86□□□□□ -0.83
TMEM116-209ENST00000550020 ODF2LQ9ULJ1 636 aa9.86□□□□□ -0.83
TMEM116-209ENST00000550020 REXO2Q9Y3B8 237 aaKnown RBP9.86□□□□□ -0.83
TMEM116-209ENST00000550020 PCDHA2Q9Y5H9 948 aa9.86□□□□□ -0.83
TMEM116-209ENST00000550020 PCDHA13Q9Y5I0 950 aa9.86□□□□□ -0.83
TMEM116-209ENST00000550020 PCDHAC2Q9Y5I4 1007 aa9.86□□□□□ -0.83
TMEM116-209ENST00000550020 SIPA1L1O43166 1804 aa9.85□□□□□ -0.83
TMEM116-209ENST00000550020 SLX4Q8IY92 1834 aa9.85□□□□□ -0.83
TMEM116-209ENST00000550020 A0A1W2PRG0 241 aa9.85□□□□□ -0.83
TMEM116-209ENST00000550020 TARSL2A2RTX5 802 aaKnown RBP9.85□□□□□ -0.83
TMEM116-209ENST00000550020 RASSF10A6NK89 507 aa9.85□□□□□ -0.83
TMEM116-209ENST00000550020 LRRC53A6NM62 1247 aa9.85□□□□□ -0.83
TMEM116-209ENST00000550020 FAM86B1E9PN63 330 aa9.85□□□□□ -0.83
TMEM116-209ENST00000550020 RBAK-RBAKDNI3L0D1 243 aa9.85□□□□□ -0.83
TMEM116-209ENST00000550020 CFBP00751 764 aa9.85□□□□□ -0.83
TMEM116-209ENST00000550020 AFPP02771 609 aaKnown RBP9.85□□□□□ -0.83
TMEM116-209ENST00000550020 FAM86B2P0C5J1 330 aa9.85□□□□□ -0.83
TMEM116-209ENST00000550020 CCDC172P0C7W6 258 aa9.85□□□□□ -0.83
TMEM116-209ENST00000550020 PNMA6AP0CW24 399 aaPredicted RBP9.85□□□□□ -0.83
TMEM116-209ENST00000550020 SPATA31C1P0DKV0 1188 aa9.85□□□□□ -0.83
TMEM116-209ENST00000550020 BCRP11274 1271 aa9.85□□□□□ -0.83
TMEM116-209ENST00000550020 XRCC5P13010 732 aaKnown RBP9.85□□□□□ -0.83
TMEM116-209ENST00000550020 NR2F2P24468 414 aa9.85□□□□□ -0.83
TMEM116-209ENST00000550020 RPS12P25398 132 aaKnown RBP9.85□□□□□ -0.83
TMEM116-209ENST00000550020 EIF4A3P38919 411 aaKnown RBP9.85□□□□□ -0.83
TMEM116-209ENST00000550020 STAT3P40763 770 aa9.85□□□□□ -0.83
TMEM116-209ENST00000550020 MAGEA1P43355 309 aa9.85□□□□□ -0.83
TMEM116-209ENST00000550020 AMPD2Q01433 879 aa9.85□□□□□ -0.83
TMEM116-209ENST00000550020 MAP3K10Q02779 954 aa9.85□□□□□ -0.83
TMEM116-209ENST00000550020 ITIH3Q06033 890 aa9.85□□□□□ -0.83
TMEM116-209ENST00000550020 PABPC4Q13310 644 aaKnown RBP eCLIP9.85□□□□□ -0.83
TMEM116-209ENST00000550020 EPHA7Q15375 998 aa9.85□□□□□ -0.83
TMEM116-209ENST00000550020 ECM1Q16610 540 aa9.85□□□□□ -0.83
TMEM116-209ENST00000550020 CEP55Q53EZ4 464 aa9.85□□□□□ -0.83
TMEM116-209ENST00000550020 EPM2AIP1Q7L775 607 aaPredicted RBP9.85□□□□□ -0.83
TMEM116-209ENST00000550020 HS2ST1Q7LGA3 356 aa9.85□□□□□ -0.83
TMEM116-209ENST00000550020 HDXQ7Z353 690 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms