RNA–Protein interactions for RNA: ENST00000549935.6

CALCOCO1-217, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 2,112 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-217ENST00000549935 RPS6KA4O75676 772 aa14.03□□□□□ -0.16
CALCOCO1-217ENST00000549935 CCDC121Q6ZUS5 278 aa14.03□□□□□ -0.16
CALCOCO1-217ENST00000549935 AMIGO3Q86WK7 504 aa14.03□□□□□ -0.16
CALCOCO1-217ENST00000549935 TBCKQ8TEA7 893 aa14.03□□□□□ -0.16
CALCOCO1-217ENST00000549935 BIN2Q9UBW5 565 aaPredicted RBP14.03□□□□□ -0.16
CALCOCO1-217ENST00000549935 SEC63Q9UGP8 760 aaKnown RBP14.03□□□□□ -0.16
CALCOCO1-217ENST00000549935 ATP6V0A2Q9Y487 856 aa14.03□□□□□ -0.16
CALCOCO1-217ENST00000549935 ATP8B3O60423 1300 aa14.02□□□□□ -0.16
CALCOCO1-217ENST00000549935 COL24A1Q17RW2 1714 aa14.02□□□□□ -0.16
CALCOCO1-217ENST00000549935 RGL2O15211 777 aa14.02□□□□□ -0.16
CALCOCO1-217ENST00000549935 TLR2O60603 784 aa14.02□□□□□ -0.16
CALCOCO1-217ENST00000549935 GNA11P29992 359 aa14.02□□□□□ -0.16
CALCOCO1-217ENST00000549935 HSD17B3P37058 310 aa14.02□□□□□ -0.16
CALCOCO1-217ENST00000549935 CDK8P49336 464 aa14.02□□□□□ -0.16
CALCOCO1-217ENST00000549935 C10orf76Q5T2E6 689 aa14.02□□□□□ -0.16
CALCOCO1-217ENST00000549935 SOGA3Q5TF21 947 aa14.02□□□□□ -0.16
CALCOCO1-217ENST00000549935 MAATS1Q7Z4T9 603 aa14.02□□□□□ -0.16
CALCOCO1-217ENST00000549935 ACTRT1Q8TDG2 376 aa14.02□□□□□ -0.16
CALCOCO1-217ENST00000549935 PBKQ96KB5 322 aa14.02□□□□□ -0.16
CALCOCO1-217ENST00000549935 LRRC27Q9C0I9 530 aa14.02□□□□□ -0.16
CALCOCO1-217ENST00000549935 BLOC1S4Q9NUP1 217 aa14.02□□□□□ -0.16
CALCOCO1-217ENST00000549935 AIPL1Q9NZN9 384 aa14.02□□□□□ -0.16
CALCOCO1-217ENST00000549935 SBF2Q86WG5 1849 aa14.02□□□□□ -0.16
CALCOCO1-217ENST00000549935 SNED1Q8TER0 1413 aa14.02□□□□□ -0.17
CALCOCO1-217ENST00000549935 ZNF831Q5JPB2 1677 aa14.02□□□□□ -0.17
CALCOCO1-217ENST00000549935 MYMKA6NI61 221 aa14.02□□□□□ -0.17
CALCOCO1-217ENST00000549935 NOL4O94818 638 aa14.02□□□□□ -0.17
CALCOCO1-217ENST00000549935 KLRC1P26715 233 aa14.02□□□□□ -0.17
CALCOCO1-217ENST00000549935 TXKP42681 527 aa14.02□□□□□ -0.17
CALCOCO1-217ENST00000549935 BTDP43251 543 aa14.02□□□□□ -0.17
CALCOCO1-217ENST00000549935 CDR1P51861 262 aa14.02□□□□□ -0.17
CALCOCO1-217ENST00000549935 PPP4CP60510 307 aa14.02□□□□□ -0.17
CALCOCO1-217ENST00000549935 MTMR3Q13615 1198 aa14.02□□□□□ -0.17
CALCOCO1-217ENST00000549935 FAM83BQ5T0W9 1011 aa14.02□□□□□ -0.17
CALCOCO1-217ENST00000549935 ZNF804AQ7Z570 1209 aa14.02□□□□□ -0.17
CALCOCO1-217ENST00000549935 PIGSQ96S52 555 aa14.02□□□□□ -0.17
CALCOCO1-217ENST00000549935 TSG101Q99816 390 aa14.02□□□□□ -0.17
CALCOCO1-217ENST00000549935 RTFDC1Q9BY42 306 aaPredicted RBP14.02□□□□□ -0.17
CALCOCO1-217ENST00000549935 ZNF287Q9HBT7 754 aa14.02□□□□□ -0.17
CALCOCO1-217ENST00000549935 CD248Q9HCU0 757 aa14.02□□□□□ -0.17
CALCOCO1-217ENST00000549935 TMEM260Q9NX78 707 aa14.02□□□□□ -0.17
CALCOCO1-217ENST00000549935 DDX20Q9UHI6 824 aaKnown RBP14.02□□□□□ -0.17
CALCOCO1-217ENST00000549935 TNRC6CQ9HCJ0 1690 aaKnown RBP14.01□□□□□ -0.17
CALCOCO1-217ENST00000549935 MARSP56192 900 aaKnown RBP14.01□□□□□ -0.17
CALCOCO1-217ENST00000549935 IFFO1Q0D2I5 559 aa14.01□□□□□ -0.17
CALCOCO1-217ENST00000549935 GRB10Q13322 594 aa14.01□□□□□ -0.17
CALCOCO1-217ENST00000549935 TDRD12Q587J7 1177 aaKnown RBP14.01□□□□□ -0.17
CALCOCO1-217ENST00000549935 REXO1Q8N1G1 1221 aaKnown RBP14.01□□□□□ -0.17
CALCOCO1-217ENST00000549935 FTCDO95954 541 aa14□□□□□ -0.17
CALCOCO1-217ENST00000549935 LDHCP07864 332 aa14□□□□□ -0.17
CALCOCO1-217ENST00000549935 GHRP10912 638 aa14□□□□□ -0.17
CALCOCO1-217ENST00000549935 FXR2P51116 673 aaKnown RBP eCLIP14□□□□□ -0.17
CALCOCO1-217ENST00000549935 ERVK-9P63128 1117 aa14□□□□□ -0.17
CALCOCO1-217ENST00000549935 ZNF844Q08AG5 666 aa14□□□□□ -0.17
CALCOCO1-217ENST00000549935 SNCBQ16143 134 aa14□□□□□ -0.17
CALCOCO1-217ENST00000549935 UAP1Q16222 522 aaPredicted RBP14□□□□□ -0.17
CALCOCO1-217ENST00000549935 ZCWPW2Q504Y3 356 aa14□□□□□ -0.17
CALCOCO1-217ENST00000549935 ANKRD20A8PQ5CZ79 823 aa14□□□□□ -0.17
CALCOCO1-217ENST00000549935 SPDYCQ5MJ68 293 aa14□□□□□ -0.17
CALCOCO1-217ENST00000549935 C16orf86Q6ZW13 317 aa14□□□□□ -0.17
CALCOCO1-217ENST00000549935 FUKQ8N0W3 1084 aa14□□□□□ -0.17
CALCOCO1-217ENST00000549935 GIMAP7Q8NHV1 300 aa14□□□□□ -0.17
CALCOCO1-217ENST00000549935 ARHGEF1Q92888 912 aaKnown RBP14□□□□□ -0.17
CALCOCO1-217ENST00000549935 CEP95Q96GE4 821 aa14□□□□□ -0.17
CALCOCO1-217ENST00000549935 SGSM3Q96HU1 749 aa14□□□□□ -0.17
CALCOCO1-217ENST00000549935 CEP63Q96MT8 703 aa14□□□□□ -0.17
CALCOCO1-217ENST00000549935 OSBPL7Q9BZF2 842 aa14□□□□□ -0.17
CALCOCO1-217ENST00000549935 UBA5Q9GZZ9 404 aa14□□□□□ -0.17
CALCOCO1-217ENST00000549935 LEMD3Q9Y2U8 911 aa14□□□□□ -0.17
CALCOCO1-217ENST00000549935 COL4A3BPQ9Y5P4 624 aa14□□□□□ -0.17
CALCOCO1-217ENST00000549935 GNA14O95837 355 aa14□□□□□ -0.17
CALCOCO1-217ENST00000549935 ELF1P32519 619 aa14□□□□□ -0.17
CALCOCO1-217ENST00000549935 USP11P51784 963 aa14□□□□□ -0.17
CALCOCO1-217ENST00000549935 MRPL12P52815 198 aaKnown RBP14□□□□□ -0.17
CALCOCO1-217ENST00000549935 PPP2R2AP63151 447 aa14□□□□□ -0.17
CALCOCO1-217ENST00000549935 FKBP3Q00688 224 aaKnown RBP14□□□□□ -0.17
CALCOCO1-217ENST00000549935 XRCC4Q13426 336 aa14□□□□□ -0.17
CALCOCO1-217ENST00000549935 GRAPQ13588 217 aa14□□□□□ -0.17
CALCOCO1-217ENST00000549935 SEPT2Q15019 361 aa14□□□□□ -0.17
CALCOCO1-217ENST00000549935 TRADDQ15628 312 aa14□□□□□ -0.17
CALCOCO1-217ENST00000549935 CYB5D1Q6P9G0 228 aa14□□□□□ -0.17
CALCOCO1-217ENST00000549935 DYMQ7RTS9 669 aa14□□□□□ -0.17
CALCOCO1-217ENST00000549935 GPIHBP1Q8IV16 184 aa14□□□□□ -0.17
CALCOCO1-217ENST00000549935 PARP9Q8IXQ6 854 aa14□□□□□ -0.17
CALCOCO1-217ENST00000549935 TEX11Q8IYF3 940 aa14□□□□□ -0.17
CALCOCO1-217ENST00000549935 GRAPLQ8TC17 118 aaPredicted RBP14□□□□□ -0.17
CALCOCO1-217ENST00000549935 SEC14L1Q92503 715 aa14□□□□□ -0.17
CALCOCO1-217ENST00000549935 LARP4BQ92615 738 aaKnown RBP14□□□□□ -0.17
CALCOCO1-217ENST00000549935 TAF4BQ92750 862 aa14□□□□□ -0.17
CALCOCO1-217ENST00000549935 CCDC114Q96M63 670 aa14□□□□□ -0.17
CALCOCO1-217ENST00000549935 MTMR9Q96QG7 549 aa14□□□□□ -0.17
CALCOCO1-217ENST00000549935 RTCBQ9Y3I0 505 aaKnown RBP14□□□□□ -0.17
CALCOCO1-217ENST00000549935 DDX60LQ5H9U9 1706 aaKnown RBP14□□□□□ -0.17
CALCOCO1-217ENST00000549935 USP17L5A8MUK1 530 aa13.99□□□□□ -0.17
CALCOCO1-217ENST00000549935 CCDC188H7C350 402 aa13.99□□□□□ -0.17
CALCOCO1-217ENST00000549935 ERCC3P19447 782 aa13.99□□□□□ -0.17
CALCOCO1-217ENST00000549935 SMARCA1P28370 1054 aa13.99□□□□□ -0.17
CALCOCO1-217ENST00000549935 RPS6KA1Q15418 735 aa13.99□□□□□ -0.17
CALCOCO1-217ENST00000549935 IFI16Q16666 785 aaKnown RBP13.99□□□□□ -0.17
CALCOCO1-217ENST00000549935 RC3H1Q5TC82 1133 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms