RNA–Protein interactions for RNA: ENST00000549639.1

USP44-205, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-205ENST00000549639 PPP2R2DQ66LE6 453 aa27.58■■■□□ 2.01
USP44-205ENST00000549639 RUFY3Q7L099 469 aa27.58■■■□□ 2.01
USP44-205ENST00000549639 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.58■■■□□ 2.01
USP44-205ENST00000549639 WNT8BQ93098 351 aa27.58■■■□□ 2.01
USP44-205ENST00000549639 KCNH7Q9NS40 1196 aa27.58■■■□□ 2.01
USP44-205ENST00000549639 CHD9Q3L8U1 2897 aa27.58■■■□□ 2
USP44-205ENST00000549639 RSPH10B2B2RC85 870 aa27.57■■■□□ 2
USP44-205ENST00000549639 TREHO43280 583 aa27.57■■■□□ 2
USP44-205ENST00000549639 RSPH10BP0C881 870 aa27.57■■■□□ 2
USP44-205ENST00000549639 IKBKEQ14164 716 aa27.57■■■□□ 2
USP44-205ENST00000549639 TRIM50Q86XT4 487 aa27.57■■■□□ 2
USP44-205ENST00000549639 HERC6Q8IVU3 1022 aa27.57■■■□□ 2
USP44-205ENST00000549639 TM6SF1Q9BZW5 370 aa27.57■■■□□ 2
USP44-205ENST00000549639 SMARCAD1Q9H4L7 1026 aa27.57■■■□□ 2
USP44-205ENST00000549639 PRDM12Q9H4Q4 367 aa27.57■■■□□ 2
USP44-205ENST00000549639 ZSWIM6Q9HCJ5 1215 aa27.57■■■□□ 2
USP44-205ENST00000549639 C6orf50Q9HD87 102 aa27.57■■■□□ 2
USP44-205ENST00000549639 JPH1Q9HDC5 661 aaPredicted RBP27.57■■■□□ 2
USP44-205ENST00000549639 SETD4Q9NVD3 440 aa27.57■■■□□ 2
USP44-205ENST00000549639 ERAP1Q9NZ08 941 aa27.57■■■□□ 2
USP44-205ENST00000549639 A0A0C4DFX4 3053 aa27.57■■■□□ 2
USP44-205ENST00000549639 NFASCO94856 1347 aa27.57■■■□□ 2
USP44-205ENST00000549639 GSTTP1A0A1W2PQM5 241 aa27.56■■■□□ 2
USP44-205ENST00000549639 WDR5P61964 334 aaKnown RBP27.56■■■□□ 2
USP44-205ENST00000549639 NIPA1Q7RTP0 329 aa27.56■■■□□ 2
USP44-205ENST00000549639 SDF4Q9BRK5 362 aa27.56■■■□□ 2
USP44-205ENST00000549639 RNF26Q9BY78 433 aaPredicted RBP27.56■■■□□ 2
USP44-205ENST00000549639 ZMYND12Q9H0C1 365 aa27.56■■■□□ 2
USP44-205ENST00000549639 CYP46A1Q9Y6A2 500 aa27.56■■■□□ 2
USP44-205ENST00000549639 LGR5O75473 907 aa27.55■■■□□ 2
USP44-205ENST00000549639 GNA11P29992 359 aa27.55■■■□□ 2
USP44-205ENST00000549639 ADAM17P78536 824 aa27.55■■■□□ 2
USP44-205ENST00000549639 TNPO1Q92973 898 aaKnown RBP27.55■■■□□ 2
USP44-205ENST00000549639 SLC9A2Q9UBY0 812 aa27.55■■■□□ 2
USP44-205ENST00000549639 TELO2Q9Y4R8 837 aa27.55■■■□□ 2
USP44-205ENST00000549639 MEIS1O00470 390 aa27.54■■■□□ 2
USP44-205ENST00000549639 IFNAR1P17181 557 aa27.54■■■□□ 2
USP44-205ENST00000549639 PDIA3P30101 505 aaKnown RBP27.54■■■□□ 2
USP44-205ENST00000549639 ZNF76P36508 570 aa27.54■■■□□ 2
USP44-205ENST00000549639 LMBR1Q8WVP7 490 aa27.54■■■□□ 2
USP44-205ENST00000549639 GLG1Q92896 1179 aa27.54■■■□□ 2
USP44-205ENST00000549639 PGBD1Q96JS3 809 aa27.54■■■□□ 2
USP44-205ENST00000549639 PKD2L1Q9P0L9 805 aa27.54■■■□□ 2
USP44-205ENST00000549639 MYOGP15173 224 aa27.53■■■□□ 2
USP44-205ENST00000549639 ARHGAP4P98171 946 aa27.53■■■□□ 2
USP44-205ENST00000549639 MBTPS1Q14703 1052 aa27.53■■■□□ 2
USP44-205ENST00000549639 NTRK3Q16288 839 aa27.53■■■□□ 2
USP44-205ENST00000549639 PKN1Q16512 942 aa27.53■■■□□ 2
USP44-205ENST00000549639 TAF2Q6P1X5 1199 aa27.53■■■□□ 2
USP44-205ENST00000549639 CCDC148Q8NFR7 591 aa27.53■■■□□ 2
USP44-205ENST00000549639 BICD2Q8TD16 824 aa27.53■■■□□ 2
USP44-205ENST00000549639 AZI2Q9H6S1 392 aa27.53■■■□□ 2
USP44-205ENST00000549639 TMEM260Q9NX78 707 aa27.53■■■□□ 2
USP44-205ENST00000549639 UNC80Q8N2C7 3258 aa27.53■■■□□ 2
USP44-205ENST00000549639 MYO9BQ13459 2157 aa27.52■■■□□ 2
USP44-205ENST00000549639 RPLP2P05387 115 aaKnown RBP27.52■■■□□ 2
USP44-205ENST00000549639 CA3P07451 260 aa27.52■■■□□ 2
USP44-205ENST00000549639 CYP3A4P08684 503 aa27.52■■■□□ 2
USP44-205ENST00000549639 RPAINQ86UA6 219 aa27.52■■■□□ 2
USP44-205ENST00000549639 REXO1Q8N1G1 1221 aaKnown RBP27.52■■■□□ 2
USP44-205ENST00000549639 CYP2W1Q8TAV3 490 aa27.52■■■□□ 2
USP44-205ENST00000549639 AGO4Q9HCK5 861 aaKnown RBP27.52■■■□□ 2
USP44-205ENST00000549639 EYSQ5T1H1 3165 aa27.52■■■□□ 2
USP44-205ENST00000549639 KAT6AQ92794 2004 aa27.51■■■□□ 2
USP44-205ENST00000549639 DLL1O00548 723 aa27.51■■□□□ 1.99
USP44-205ENST00000549639 TLL1O43897 1013 aa27.51■■□□□ 1.99
USP44-205ENST00000549639 PPFIA1Q13136 1202 aa27.51■■□□□ 1.99
USP44-205ENST00000549639 JAKMIP3Q5VZ66 844 aa27.51■■□□□ 1.99
USP44-205ENST00000549639 PHKBQ93100 1093 aa27.51■■□□□ 1.99
USP44-205ENST00000549639 ZNF274Q96GC6 653 aaPredicted RBP27.51■■□□□ 1.99
USP44-205ENST00000549639 ARP10275 920 aa27.5■■□□□ 1.99
USP44-205ENST00000549639 TOB2Q14106 344 aaPredicted RBP27.5■■□□□ 1.99
USP44-205ENST00000549639 PLEKHG4Q58EX7 1191 aa27.5■■□□□ 1.99
USP44-205ENST00000549639 FAM26DQ5JW98 314 aa27.5■■□□□ 1.99
USP44-205ENST00000549639 PLPPR4Q7Z2D5 763 aa27.5■■□□□ 1.99
USP44-205ENST00000549639 RSPH3Q86UC2 560 aa27.5■■□□□ 1.99
USP44-205ENST00000549639 CRYGNQ8WXF5 182 aa27.5■■□□□ 1.99
USP44-205ENST00000549639 ZBED2Q9BTP6 218 aa27.5■■□□□ 1.99
USP44-205ENST00000549639 RRN3P2A6NIE6 340 aa27.49■■□□□ 1.99
USP44-205ENST00000549639 ACTR2P61160 394 aa27.49■■□□□ 1.99
USP44-205ENST00000549639 GRIK4Q16099 956 aa27.49■■□□□ 1.99
USP44-205ENST00000549639 TRIM22Q8IYM9 498 aa27.49■■□□□ 1.99
USP44-205ENST00000549639 DBF4BQ8NFT6 615 aa27.49■■□□□ 1.99
USP44-205ENST00000549639 SEPT8Q92599 483 aa27.49■■□□□ 1.99
USP44-205ENST00000549639 SLC26A6Q9BXS9 759 aa27.49■■□□□ 1.99
USP44-205ENST00000549639 SH3GLB2Q9NR46 395 aa27.49■■□□□ 1.99
USP44-205ENST00000549639 GJB5O95377 273 aa27.48■■□□□ 1.99
USP44-205ENST00000549639 SLC26A2P50443 739 aa27.48■■□□□ 1.99
USP44-205ENST00000549639 CCT2P78371 535 aaKnown RBP27.48■■□□□ 1.99
USP44-205ENST00000549639 SETQ01105 290 aaPredicted RBP27.48■■□□□ 1.99
USP44-205ENST00000549639 ADGRE1Q14246 886 aa27.48■■□□□ 1.99
USP44-205ENST00000549639 APBB2Q92870 758 aa27.48■■□□□ 1.99
USP44-205ENST00000549639 RAD9AQ99638 391 aa27.48■■□□□ 1.99
USP44-205ENST00000549639 CHD7Q9P2D1 2997 aa27.48■■□□□ 1.99
USP44-205ENST00000549639 TUBE1Q9UJT0 475 aa27.48■■□□□ 1.99
USP44-205ENST00000549639 MBLAC1A4D2B0 266 aaPredicted RBP27.47■■□□□ 1.99
USP44-205ENST00000549639 EIF5BO60841 1220 aaKnown RBP27.47■■□□□ 1.99
USP44-205ENST00000549639 ATG7O95352 703 aa27.47■■□□□ 1.99
USP44-205ENST00000549639 AMHP03971 560 aa27.47■■□□□ 1.99
USP44-205ENST00000549639 IGFBP4P22692 258 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms