RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 ZNF746Q6NUN9 644 aaPredicted RBP23.89■■□□□ 1.42
VPS29-206ENST00000549578 B3GNT9Q6UX72 402 aa23.89■■□□□ 1.42
VPS29-206ENST00000549578 RNF180Q86T96 592 aa23.89■■□□□ 1.42
VPS29-206ENST00000549578 LINC00301Q8NCQ3 95 aa23.89■■□□□ 1.42
VPS29-206ENST00000549578 KLHDC9Q8NEP7 349 aa23.89■■□□□ 1.42
VPS29-206ENST00000549578 ABHD8Q96I13 439 aa23.89■■□□□ 1.42
VPS29-206ENST00000549578 CRISPLD2Q9H0B8 497 aa23.89■■□□□ 1.42
VPS29-206ENST00000549578 ELP1O95163 1332 aa23.89■■□□□ 1.42
VPS29-206ENST00000549578 TFRCP02786 760 aaKnown RBP23.89■■□□□ 1.41
VPS29-206ENST00000549578 GJA8P48165 433 aa23.89■■□□□ 1.41
VPS29-206ENST00000549578 KRT85P78386 507 aa23.89■■□□□ 1.41
VPS29-206ENST00000549578 SLC39A14Q15043 492 aa23.89■■□□□ 1.41
VPS29-206ENST00000549578 NCAPH2Q6IBW4 605 aa23.89■■□□□ 1.41
VPS29-206ENST00000549578 CFAP45Q9UL16 551 aa23.89■■□□□ 1.41
VPS29-206ENST00000549578 SAMM50Q9Y512 469 aa23.89■■□□□ 1.41
VPS29-206ENST00000549578 POTEMA6NI47 508 aa23.88■■□□□ 1.41
VPS29-206ENST00000549578 EML1O00423 815 aa23.88■■□□□ 1.41
VPS29-206ENST00000549578 YEATS4O95619 227 aa23.88■■□□□ 1.41
VPS29-206ENST00000549578 CST5P28325 142 aaPredicted RBP23.88■■□□□ 1.41
VPS29-206ENST00000549578 TCF7P36402 384 aaPredicted RBP23.88■■□□□ 1.41
VPS29-206ENST00000549578 BRDTQ58F21 947 aaPredicted RBP23.88■■□□□ 1.41
VPS29-206ENST00000549578 ARL6IP4Q66PJ3 421 aaKnown RBP23.88■■□□□ 1.41
VPS29-206ENST00000549578 DTHD1Q6ZMT9 781 aa23.88■■□□□ 1.41
VPS29-206ENST00000549578 TNS4Q8IZW8 715 aa23.88■■□□□ 1.41
VPS29-206ENST00000549578 ARRDC4Q8NCT1 418 aa23.88■■□□□ 1.41
VPS29-206ENST00000549578 SEPT1Q8WYJ6 367 aa23.88■■□□□ 1.41
VPS29-206ENST00000549578 TCHHQ07283 1943 aa23.87■■□□□ 1.41
VPS29-206ENST00000549578 VWA3AA6NCI4 1184 aa23.87■■□□□ 1.41
VPS29-206ENST00000549578 WDR64B1ANS9 1081 aa23.87■■□□□ 1.41
VPS29-206ENST00000549578 KCNA10Q16322 511 aa23.87■■□□□ 1.41
VPS29-206ENST00000549578 DGKDQ16760 1214 aa23.87■■□□□ 1.41
VPS29-206ENST00000549578 TMEM266Q2M3C6 531 aa23.87■■□□□ 1.41
VPS29-206ENST00000549578 CCSAPQ6IQ19 270 aaPredicted RBP23.87■■□□□ 1.41
VPS29-206ENST00000549578 MIER3Q7Z3K6 550 aa23.87■■□□□ 1.41
VPS29-206ENST00000549578 SMAP1Q8IYB5 467 aaPredicted RBP23.87■■□□□ 1.41
VPS29-206ENST00000549578 TNPO1Q92973 898 aaKnown RBP23.87■■□□□ 1.41
VPS29-206ENST00000549578 DISC1Q9NRI5 854 aa23.87■■□□□ 1.41
VPS29-206ENST00000549578 SPTLC2O15270 562 aa23.86■■□□□ 1.41
VPS29-206ENST00000549578 MYL3P08590 195 aa23.86■■□□□ 1.41
VPS29-206ENST00000549578 ZNF286BP0CG31 522 aa23.86■■□□□ 1.41
VPS29-206ENST00000549578 HOXD8P13378 290 aaPredicted RBP23.86■■□□□ 1.41
VPS29-206ENST00000549578 FXR2P51116 673 aaKnown RBP eCLIP23.86■■□□□ 1.41
VPS29-206ENST00000549578 GRIN1Q05586 938 aa23.86■■□□□ 1.41
VPS29-206ENST00000549578 UTP14CQ5TAP6 766 aaKnown RBP23.86■■□□□ 1.41
VPS29-206ENST00000549578 ABHD15Q6UXT9 468 aa23.86■■□□□ 1.41
VPS29-206ENST00000549578 TRIM50Q86XT4 487 aa23.86■■□□□ 1.41
VPS29-206ENST00000549578 PPFIA4O75335 1185 aa23.85■■□□□ 1.41
VPS29-206ENST00000549578 ATG7O95352 703 aa23.85■■□□□ 1.41
VPS29-206ENST00000549578 SUPT20HL2P0C7V6 817 aa23.85■■□□□ 1.41
VPS29-206ENST00000549578 JAK3P52333 1124 aa23.85■■□□□ 1.41
VPS29-206ENST00000549578 FBXO2Q9UK22 296 aaPredicted RBP23.85■■□□□ 1.41
VPS29-206ENST00000549578 PCDHA10Q9Y5I2 948 aa23.85■■□□□ 1.41
VPS29-206ENST00000549578 DNM1LO00429 736 aa23.84■■□□□ 1.41
VPS29-206ENST00000549578 ZEB2O60315 1214 aa23.84■■□□□ 1.41
VPS29-206ENST00000549578 LGALS2P05162 132 aa23.84■■□□□ 1.41
VPS29-206ENST00000549578 ASGR1P07306 291 aa23.84■■□□□ 1.41
VPS29-206ENST00000549578 SFNP31947 248 aa23.84■■□□□ 1.41
VPS29-206ENST00000549578 MIS18BP1Q6P0N0 1132 aa23.84■■□□□ 1.41
VPS29-206ENST00000549578 CXCL17Q6UXB2 119 aa23.84■■□□□ 1.41
VPS29-206ENST00000549578 CCDC60Q8IWA6 550 aaPredicted RBP23.84■■□□□ 1.41
VPS29-206ENST00000549578 PCSK9Q8NBP7 692 aaKnown RBP23.84■■□□□ 1.41
VPS29-206ENST00000549578 PCYT2Q99447 389 aa23.84■■□□□ 1.41
VPS29-206ENST00000549578 GDPD2Q9HCC8 539 aa23.84■■□□□ 1.41
VPS29-206ENST00000549578 KBTBD13C9JR72 458 aa23.84■■□□□ 1.41
VPS29-206ENST00000549578 BACH1O14867 736 aa23.84■■□□□ 1.41
VPS29-206ENST00000549578 PSAPP07602 524 aa23.84■■□□□ 1.41
VPS29-206ENST00000549578 ACLYP53396 1101 aa23.84■■□□□ 1.41
VPS29-206ENST00000549578 PURAQ00577 322 aaKnown RBP23.84■■□□□ 1.41
VPS29-206ENST00000549578 IGSF22Q8N9C0 903 aa23.84■■□□□ 1.41
VPS29-206ENST00000549578 RDM1Q8NG50 284 aa23.84■■□□□ 1.41
VPS29-206ENST00000549578 LEO1Q8WVC0 666 aaPredicted RBP23.84■■□□□ 1.41
VPS29-206ENST00000549578 FERMT2Q96AC1 680 aa23.84■■□□□ 1.41
VPS29-206ENST00000549578 SPATA32Q96LK8 384 aa23.84■■□□□ 1.41
VPS29-206ENST00000549578 CLIC6Q96NY7 704 aa23.84■■□□□ 1.41
VPS29-206ENST00000549578 LRWD1Q9UFC0 647 aa23.84■■□□□ 1.41
VPS29-206ENST00000549578 RCOR1Q9UKL0 485 aa23.84■■□□□ 1.41
VPS29-206ENST00000549578 MORC2Q9Y6X9 1032 aaPredicted RBP23.84■■□□□ 1.41
VPS29-206ENST00000549578 PP2D1A8MPX8 630 aa23.83■■□□□ 1.41
VPS29-206ENST00000549578 MNX1P50219 401 aaPredicted RBP23.83■■□□□ 1.41
VPS29-206ENST00000549578 SWSAP1Q6NVH7 229 aa23.83■■□□□ 1.41
VPS29-206ENST00000549578 KCNG4Q8TDN1 519 aa23.83■■□□□ 1.41
VPS29-206ENST00000549578 C16orf70Q9BSU1 422 aa23.83■■□□□ 1.41
VPS29-206ENST00000549578 RAB34Q9BZG1 259 aa23.83■■□□□ 1.41
VPS29-206ENST00000549578 SRPRBQ9Y5M8 271 aaKnown RBP23.83■■□□□ 1.41
VPS29-206ENST00000549578 EMSYQ7Z589 1322 aa23.82■■□□□ 1.4
VPS29-206ENST00000549578 IGKV6D-21A0A0A0MT36 114 aa23.82■■□□□ 1.4
VPS29-206ENST00000549578 PPP6R2O75170 966 aa23.82■■□□□ 1.4
VPS29-206ENST00000549578 LGR5O75473 907 aa23.82■■□□□ 1.4
VPS29-206ENST00000549578 EN2P19622 333 aaPredicted RBP23.82■■□□□ 1.4
VPS29-206ENST00000549578 CDC25AP30304 524 aa23.82■■□□□ 1.4
VPS29-206ENST00000549578 PDIA5Q14554 519 aa23.82■■□□□ 1.4
VPS29-206ENST00000549578 EPHA7Q15375 998 aa23.82■■□□□ 1.4
VPS29-206ENST00000549578 KRI1Q8N9T8 703 aaKnown RBP23.82■■□□□ 1.4
VPS29-206ENST00000549578 GLG1Q92896 1179 aa23.82■■□□□ 1.4
VPS29-206ENST00000549578 TSEN34Q9BSV6 310 aaKnown RBP23.82■■□□□ 1.4
VPS29-206ENST00000549578 GABBR1Q9UBS5 961 aa23.82■■□□□ 1.4
VPS29-206ENST00000549578 MOXD2PA6NHM9 499 aa23.81■■□□□ 1.4
VPS29-206ENST00000549578 KPNA6O60684 536 aa23.81■■□□□ 1.4
VPS29-206ENST00000549578 CYP4A11Q02928 519 aa23.81■■□□□ 1.4
VPS29-206ENST00000549578 UGCGQ16739 394 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms