RNA–Protein interactions for RNA: ENST00000549526.1

SMARCD1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-207ENST00000549526 YTHDC1Q96MU7 727 aaKnown RBP9.8□□□□□ -0.84
SMARCD1-207ENST00000549526 CYP26B1Q9NR63 512 aa9.8□□□□□ -0.84
SMARCD1-207ENST00000549526 DBNLQ9UJU6 430 aaKnown RBP9.8□□□□□ -0.84
SMARCD1-207ENST00000549526 DBR1Q9UK59 544 aaKnown RBP9.8□□□□□ -0.84
SMARCD1-207ENST00000549526 SIT1Q9Y3P8 196 aa9.8□□□□□ -0.84
SMARCD1-207ENST00000549526 PCDHB12Q9Y5F1 795 aa9.8□□□□□ -0.84
SMARCD1-207ENST00000549526 DSPP15924 2871 aaKnown RBP9.8□□□□□ -0.84
SMARCD1-207ENST00000549526 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.79□□□□□ -0.84
SMARCD1-207ENST00000549526 C17orf102A2RUQ5 167 aa9.79□□□□□ -0.84
SMARCD1-207ENST00000549526 NFIBO00712 420 aa9.79□□□□□ -0.84
SMARCD1-207ENST00000549526 TTLL1O95922 423 aa9.79□□□□□ -0.84
SMARCD1-207ENST00000549526 CFHP08603 1231 aa9.79□□□□□ -0.84
SMARCD1-207ENST00000549526 TGM1P22735 817 aa9.79□□□□□ -0.84
SMARCD1-207ENST00000549526 MCCP23508 829 aa9.79□□□□□ -0.84
SMARCD1-207ENST00000549526 PMLP29590 882 aa9.79□□□□□ -0.84
SMARCD1-207ENST00000549526 SLC1A4P43007 532 aa9.79□□□□□ -0.84
SMARCD1-207ENST00000549526 SHC2P98077 582 aa9.79□□□□□ -0.84
SMARCD1-207ENST00000549526 UBE3AQ05086 875 aa9.79□□□□□ -0.84
SMARCD1-207ENST00000549526 SPOUT1Q5T280 376 aaKnown RBP9.79□□□□□ -0.84
SMARCD1-207ENST00000549526 CTR9Q6PD62 1173 aa9.79□□□□□ -0.84
SMARCD1-207ENST00000549526 SLC30A10Q6XR72 485 aa9.79□□□□□ -0.84
SMARCD1-207ENST00000549526 RUFY4Q6ZNE9 571 aa9.79□□□□□ -0.84
SMARCD1-207ENST00000549526 ZNF444Q8N0Y2 327 aaPredicted RBP9.79□□□□□ -0.84
SMARCD1-207ENST00000549526 NETO1Q8TDF5 533 aa9.79□□□□□ -0.84
SMARCD1-207ENST00000549526 RASGRP4Q8TDF6 673 aa9.79□□□□□ -0.84
SMARCD1-207ENST00000549526 CEP95Q96GE4 821 aa9.79□□□□□ -0.84
SMARCD1-207ENST00000549526 TMEM260Q9NX78 707 aa9.79□□□□□ -0.84
SMARCD1-207ENST00000549526 WNT16Q9UBV4 365 aa9.79□□□□□ -0.84
SMARCD1-207ENST00000549526 PRR12Q9ULL5 1215 aa9.79□□□□□ -0.84
SMARCD1-207ENST00000549526 DUSP12Q9UNI6 340 aa9.79□□□□□ -0.84
SMARCD1-207ENST00000549526 LHX6Q9UPM6 363 aa9.79□□□□□ -0.84
SMARCD1-207ENST00000549526 KIAA1217Q5T5P2 1943 aa9.79□□□□□ -0.84
SMARCD1-207ENST00000549526 TCRBV5S4A2TA0A5A2 114 aa9.78□□□□□ -0.84
SMARCD1-207ENST00000549526 KRBA1A5PL33 1030 aa9.78□□□□□ -0.84
SMARCD1-207ENST00000549526 SPTLC1O15269 473 aa9.78□□□□□ -0.84
SMARCD1-207ENST00000549526 TREHO43280 583 aa9.78□□□□□ -0.84
SMARCD1-207ENST00000549526 CAND2O75155 1236 aa9.78□□□□□ -0.84
SMARCD1-207ENST00000549526 MBD4O95243 580 aa9.78□□□□□ -0.84
SMARCD1-207ENST00000549526 ICAM1P05362 532 aa9.78□□□□□ -0.84
SMARCD1-207ENST00000549526 EDNRBP24530 442 aa9.78□□□□□ -0.84
SMARCD1-207ENST00000549526 ATP8B2P98198 1209 aa9.78□□□□□ -0.84
SMARCD1-207ENST00000549526 ATAT1Q5SQI0 421 aa9.78□□□□□ -0.84
SMARCD1-207ENST00000549526 N4BP2L1Q5TBK1 243 aaPredicted RBP9.78□□□□□ -0.84
SMARCD1-207ENST00000549526 PLPP4Q5VZY2 271 aa9.78□□□□□ -0.84
SMARCD1-207ENST00000549526 KCTD1Q719H9 257 aa9.78□□□□□ -0.84
SMARCD1-207ENST00000549526 DNERQ8NFT8 737 aa9.78□□□□□ -0.84
SMARCD1-207ENST00000549526 CASP10Q92851 521 aa9.78□□□□□ -0.84
SMARCD1-207ENST00000549526 TBC1D17Q9HA65 648 aa9.78□□□□□ -0.84
SMARCD1-207ENST00000549526 PARD6AQ9NPB6 346 aa9.78□□□□□ -0.84
SMARCD1-207ENST00000549526 MTMR4Q9NYA4 1195 aa9.78□□□□□ -0.84
SMARCD1-207ENST00000549526 SYNPO2Q9UMS6 1093 aa9.78□□□□□ -0.84
SMARCD1-207ENST00000549526 USTQ9Y2C2 406 aa9.78□□□□□ -0.84
SMARCD1-207ENST00000549526 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.78□□□□□ -0.84
SMARCD1-207ENST00000549526 C1QTNF9BB2RNN3 333 aa9.77□□□□□ -0.85
SMARCD1-207ENST00000549526 PPFIA4O75335 1185 aa9.77□□□□□ -0.85
SMARCD1-207ENST00000549526 SURF6O75683 361 aaKnown RBP9.77□□□□□ -0.85
SMARCD1-207ENST00000549526 FGF18O76093 207 aa9.77□□□□□ -0.85
SMARCD1-207ENST00000549526 EOMESO95936 686 aa9.77□□□□□ -0.85
SMARCD1-207ENST00000549526 C1QTNF9P0C862 333 aa9.77□□□□□ -0.85
SMARCD1-207ENST00000549526 GHRP10912 638 aa9.77□□□□□ -0.85
SMARCD1-207ENST00000549526 RPS6P62753 249 aaKnown RBP9.77□□□□□ -0.85
SMARCD1-207ENST00000549526 RING1Q06587 406 aa9.77□□□□□ -0.85
SMARCD1-207ENST00000549526 SPEM2Q0P670 501 aa9.77□□□□□ -0.85
SMARCD1-207ENST00000549526 LAMC2Q13753 1193 aa9.77□□□□□ -0.85
SMARCD1-207ENST00000549526 POLA2Q14181 598 aa9.77□□□□□ -0.85
SMARCD1-207ENST00000549526 SSH3Q8TE77 659 aa9.77□□□□□ -0.85
SMARCD1-207ENST00000549526 DDX1Q92499 740 aaKnown RBP9.77□□□□□ -0.85
SMARCD1-207ENST00000549526 ACSF2Q96CM8 615 aaPredicted RBP9.77□□□□□ -0.85
SMARCD1-207ENST00000549526 KCNK12Q9HB15 430 aa9.77□□□□□ -0.85
SMARCD1-207ENST00000549526 AAASQ9NRG9 546 aa9.77□□□□□ -0.85
SMARCD1-207ENST00000549526 CA14Q9ULX7 337 aa9.77□□□□□ -0.85
SMARCD1-207ENST00000549526 DDX19BQ9UMR2 479 aa9.77□□□□□ -0.85
SMARCD1-207ENST00000549526 SMG5Q9UPR3 1016 aaKnown RBP9.77□□□□□ -0.85
SMARCD1-207ENST00000549526 SLC4A4Q9Y6R1 1079 aa9.77□□□□□ -0.85
SMARCD1-207ENST00000549526 IGKV6D-41A0A0C4DH26 115 aa9.76□□□□□ -0.85
SMARCD1-207ENST00000549526 POTEMA6NI47 508 aa9.76□□□□□ -0.85
SMARCD1-207ENST00000549526 NARSO43776 548 aaKnown RBP9.76□□□□□ -0.85
SMARCD1-207ENST00000549526 PLA2G6O60733 806 aa9.76□□□□□ -0.85
SMARCD1-207ENST00000549526 APOBRQ0VD83 1088 aa9.76□□□□□ -0.85
SMARCD1-207ENST00000549526 ZNF528Q3MIS6 628 aa9.76□□□□□ -0.85
SMARCD1-207ENST00000549526 SLFNL1Q499Z3 407 aa9.76□□□□□ -0.85
SMARCD1-207ENST00000549526 FAM26DQ5JW98 314 aa9.76□□□□□ -0.85
SMARCD1-207ENST00000549526 RARS2Q5T160 578 aaKnown RBP9.76□□□□□ -0.85
SMARCD1-207ENST00000549526 RCSD1Q6JBY9 416 aa9.76□□□□□ -0.85
SMARCD1-207ENST00000549526 XRRA1Q6P2D8 792 aa9.76□□□□□ -0.85
SMARCD1-207ENST00000549526 CEP85Q6P2H3 762 aa9.76□□□□□ -0.85
SMARCD1-207ENST00000549526 POTEGQ6S5H5 508 aa9.76□□□□□ -0.85
SMARCD1-207ENST00000549526 UNQ6494/PRO21346Q6UXR6 183 aa9.76□□□□□ -0.85
SMARCD1-207ENST00000549526 THNSL1Q8IYQ7 743 aa9.76□□□□□ -0.85
SMARCD1-207ENST00000549526 MAML2Q8IZL2 1156 aaPredicted RBP9.76□□□□□ -0.85
SMARCD1-207ENST00000549526 PPTC7Q8NI37 304 aa9.76□□□□□ -0.85
SMARCD1-207ENST00000549526 EAF2Q96CJ1 260 aaPredicted RBP9.76□□□□□ -0.85
SMARCD1-207ENST00000549526 GMCL1Q96IK5 515 aa9.76□□□□□ -0.85
SMARCD1-207ENST00000549526 TCF25Q9BQ70 676 aa9.76□□□□□ -0.85
SMARCD1-207ENST00000549526 RNPEPQ9H4A4 650 aa9.76□□□□□ -0.85
SMARCD1-207ENST00000549526 ENTPD7Q9NQZ7 604 aa9.76□□□□□ -0.85
SMARCD1-207ENST00000549526 DLGAP2Q9P1A6 1054 aa9.76□□□□□ -0.85
SMARCD1-207ENST00000549526 GMEB2Q9UKD1 530 aa9.76□□□□□ -0.85
SMARCD1-207ENST00000549526 PCDHGA2Q9Y5H1 932 aa9.76□□□□□ -0.85
SMARCD1-207ENST00000549526 UNC79Q9P2D8 2635 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 282.7 ms