RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 PGM5Q15124 567 aa12.57□□□□□ -0.4
TRAFD1-206ENST00000549358 FAM26DQ5JW98 314 aa12.57□□□□□ -0.4
TRAFD1-206ENST00000549358 STOX1Q6ZVD7 989 aa12.57□□□□□ -0.4
TRAFD1-206ENST00000549358 RBM23Q86U06 439 aaKnown RBP12.57□□□□□ -0.4
TRAFD1-206ENST00000549358 SMRP1Q8NCR6 262 aa12.57□□□□□ -0.4
TRAFD1-206ENST00000549358 PPP2R3CQ969Q6 453 aa12.57□□□□□ -0.4
TRAFD1-206ENST00000549358 ZNF689Q96CS4 500 aaPredicted RBP12.57□□□□□ -0.4
TRAFD1-206ENST00000549358 RPGRIP1Q96KN7 1286 aa12.57□□□□□ -0.4
TRAFD1-206ENST00000549358 FAM227BQ96M60 508 aa12.57□□□□□ -0.4
TRAFD1-206ENST00000549358 PLVAPQ9BX97 442 aa12.57□□□□□ -0.4
TRAFD1-206ENST00000549358 USP26Q9BXU7 913 aa12.57□□□□□ -0.4
TRAFD1-206ENST00000549358 IRF2BPLQ9H1B7 796 aa12.57□□□□□ -0.4
TRAFD1-206ENST00000549358 RC3H2Q9HBD1 1191 aaKnown RBP12.57□□□□□ -0.4
TRAFD1-206ENST00000549358 TLR9Q9NR96 1032 aa12.57□□□□□ -0.4
TRAFD1-206ENST00000549358 SUPT16HQ9Y5B9 1047 aaKnown RBP12.57□□□□□ -0.4
TRAFD1-206ENST00000549358 KIAA1217Q5T5P2 1943 aa12.56□□□□□ -0.4
TRAFD1-206ENST00000549358 MYO15AQ9UKN7 3530 aa12.56□□□□□ -0.4
TRAFD1-206ENST00000549358 OPLAHO14841 1288 aa12.56□□□□□ -0.4
TRAFD1-206ENST00000549358 DGKIO75912 1065 aa12.56□□□□□ -0.4
TRAFD1-206ENST00000549358 MX1P20591 662 aa12.56□□□□□ -0.4
TRAFD1-206ENST00000549358 NRIP1P48552 1158 aa12.56□□□□□ -0.4
TRAFD1-206ENST00000549358 ARHGAP4P98171 946 aa12.56□□□□□ -0.4
TRAFD1-206ENST00000549358 MCMDC2Q4G0Z9 681 aa12.56□□□□□ -0.4
TRAFD1-206ENST00000549358 TBC1D10CQ8IV04 446 aa12.56□□□□□ -0.4
TRAFD1-206ENST00000549358 EFHBQ8N7U6 833 aa12.56□□□□□ -0.4
TRAFD1-206ENST00000549358 IL31RAQ8NI17 732 aa12.56□□□□□ -0.4
TRAFD1-206ENST00000549358 ESR2Q92731 530 aa12.56□□□□□ -0.4
TRAFD1-206ENST00000549358 ASIC4Q96FT7 647 aa12.56□□□□□ -0.4
TRAFD1-206ENST00000549358 KAT14Q9H8E8 782 aa12.56□□□□□ -0.4
TRAFD1-206ENST00000549358 BARX2Q9UMQ3 279 aaPredicted RBP12.56□□□□□ -0.4
TRAFD1-206ENST00000549358 USP15Q9Y4E8 981 aaPredicted RBP12.56□□□□□ -0.4
TRAFD1-206ENST00000549358 RALGAPA2Q2PPJ7 1873 aa12.56□□□□□ -0.4
TRAFD1-206ENST00000549358 NLRC5Q86WI3 1866 aa12.56□□□□□ -0.4
TRAFD1-206ENST00000549358 CCDC171Q6TFL3 1326 aa12.56□□□□□ -0.4
TRAFD1-206ENST00000549358 ITGB1P05556 798 aa12.55□□□□□ -0.4
TRAFD1-206ENST00000549358 PARP1P09874 1014 aaKnown RBP12.55□□□□□ -0.4
TRAFD1-206ENST00000549358 PCP11498 1178 aaKnown RBP12.55□□□□□ -0.4
TRAFD1-206ENST00000549358 ASPRV1Q53RT3 343 aa12.55□□□□□ -0.4
TRAFD1-206ENST00000549358 KLHL23Q8NBE8 558 aa12.55□□□□□ -0.4
TRAFD1-206ENST00000549358 SPPL3Q8TCT6 385 aa12.55□□□□□ -0.4
TRAFD1-206ENST00000549358 P2RX5Q93086 422 aa12.55□□□□□ -0.4
TRAFD1-206ENST00000549358 EVI5LQ96CN4 794 aa12.55□□□□□ -0.4
TRAFD1-206ENST00000549358 PHF12Q96QT6 1004 aa12.55□□□□□ -0.4
TRAFD1-206ENST00000549358 PHF7Q9BWX1 381 aaPredicted RBP12.55□□□□□ -0.4
TRAFD1-206ENST00000549358 AMNQ9BXJ7 453 aa12.55□□□□□ -0.4
TRAFD1-206ENST00000549358 RNF41Q9H4P4 317 aaPredicted RBP12.55□□□□□ -0.4
TRAFD1-206ENST00000549358 EHMT1Q9H9B1 1298 aa12.55□□□□□ -0.4
TRAFD1-206ENST00000549358 MRPL42Q9Y6G3 142 aaKnown RBP12.55□□□□□ -0.4
TRAFD1-206ENST00000549358 NEDD4P46934 1319 aa12.55□□□□□ -0.4
TRAFD1-206ENST00000549358 A0A0D9SFI3 127 aa12.54□□□□□ -0.4
TRAFD1-206ENST00000549358 TRIM6-TRIM34B2RNG4 842 aa12.54□□□□□ -0.4
TRAFD1-206ENST00000549358 PPFIA3O75145 1194 aa12.54□□□□□ -0.4
TRAFD1-206ENST00000549358 CCND2P30279 289 aa12.54□□□□□ -0.4
TRAFD1-206ENST00000549358 ADAM17P78536 824 aa12.54□□□□□ -0.4
TRAFD1-206ENST00000549358 GHRHRQ02643 423 aa12.54□□□□□ -0.4
TRAFD1-206ENST00000549358 LPIN1Q14693 890 aa12.54□□□□□ -0.4
TRAFD1-206ENST00000549358 UTP14CQ5TAP6 766 aaKnown RBP12.54□□□□□ -0.4
TRAFD1-206ENST00000549358 CYFIP1Q7L576 1253 aa12.54□□□□□ -0.4
TRAFD1-206ENST00000549358 IQCA1Q86XH1 822 aa12.54□□□□□ -0.4
TRAFD1-206ENST00000549358 TRIM50Q86XT4 487 aa12.54□□□□□ -0.4
TRAFD1-206ENST00000549358 LMBR1Q8WVP7 490 aa12.54□□□□□ -0.4
TRAFD1-206ENST00000549358 POF1BQ8WVV4 589 aa12.54□□□□□ -0.4
TRAFD1-206ENST00000549358 GPR20Q99678 358 aa12.54□□□□□ -0.4
TRAFD1-206ENST00000549358 MAP3K20Q9NYL2 800 aaKnown RBP12.54□□□□□ -0.4
TRAFD1-206ENST00000549358 PCDHGC5Q9Y5F6 944 aa12.54□□□□□ -0.4
TRAFD1-206ENST00000549358 PCDHA1Q9Y5I3 950 aa12.54□□□□□ -0.4
TRAFD1-206ENST00000549358 TECTAO75443 2155 aa12.54□□□□□ -0.4
TRAFD1-206ENST00000549358 ZNF213O14771 459 aa12.53□□□□□ -0.4
TRAFD1-206ENST00000549358 PER2O15055 1255 aa12.53□□□□□ -0.4
TRAFD1-206ENST00000549358 PPP1R11O60927 126 aaPredicted RBP12.53□□□□□ -0.4
TRAFD1-206ENST00000549358 KDM4AO75164 1064 aa12.53□□□□□ -0.4
TRAFD1-206ENST00000549358 GLP2RO95838 553 aa12.53□□□□□ -0.4
TRAFD1-206ENST00000549358 PDGFBP01127 241 aaPredicted RBP12.53□□□□□ -0.4
TRAFD1-206ENST00000549358 ICAM3P32942 547 aa12.53□□□□□ -0.4
TRAFD1-206ENST00000549358 RBM10P98175 930 aaKnown RBP12.53□□□□□ -0.4
TRAFD1-206ENST00000549358 NAALADL2Q58DX5 795 aa12.53□□□□□ -0.4
TRAFD1-206ENST00000549358 RUFY4Q6ZNE9 571 aa12.53□□□□□ -0.4
TRAFD1-206ENST00000549358 ASCL5Q7RTU5 278 aa12.53□□□□□ -0.4
TRAFD1-206ENST00000549358 ZNF589Q86UQ0 364 aaPredicted RBP12.53□□□□□ -0.4
TRAFD1-206ENST00000549358 FCHSD1Q86WN1 690 aa12.53□□□□□ -0.4
TRAFD1-206ENST00000549358 MICAL1Q8TDZ2 1067 aa12.53□□□□□ -0.4
TRAFD1-206ENST00000549358 TLE6Q9H808 572 aa12.53□□□□□ -0.4
TRAFD1-206ENST00000549358 RCAN3Q9UKA8 241 aa12.53□□□□□ -0.4
TRAFD1-206ENST00000549358 ZNF215Q9UL58 517 aaPredicted RBP12.53□□□□□ -0.4
TRAFD1-206ENST00000549358 TELO2Q9Y4R8 837 aa12.53□□□□□ -0.4
TRAFD1-206ENST00000549358 ZMYM6O95789 1325 aa12.53□□□□□ -0.4
TRAFD1-206ENST00000549358 NRCAMQ92823 1304 aa12.53□□□□□ -0.4
TRAFD1-206ENST00000549358 MYH7BA7E2Y1 1941 aa12.52□□□□□ -0.4
TRAFD1-206ENST00000549358 ATG2AQ2TAZ0 1938 aa12.52□□□□□ -0.4
TRAFD1-206ENST00000549358 SPATA31C2B4DYI2 1134 aa12.52□□□□□ -0.41
TRAFD1-206ENST00000549358 PROB1E7EW31 1015 aa12.52□□□□□ -0.41
TRAFD1-206ENST00000549358 SP4Q02446 784 aa12.52□□□□□ -0.41
TRAFD1-206ENST00000549358 MGAT3Q09327 533 aa12.52□□□□□ -0.41
TRAFD1-206ENST00000549358 NEDD9Q14511 834 aa12.52□□□□□ -0.41
TRAFD1-206ENST00000549358 PTPN21Q16825 1174 aa12.52□□□□□ -0.41
TRAFD1-206ENST00000549358 GNPTABQ3T906 1256 aa12.52□□□□□ -0.41
TRAFD1-206ENST00000549358 PAN2Q504Q3 1202 aaKnown RBP12.52□□□□□ -0.41
TRAFD1-206ENST00000549358 CCDC178Q5BJE1 867 aa12.52□□□□□ -0.41
TRAFD1-206ENST00000549358 METTL7BQ6UX53 244 aa12.52□□□□□ -0.41
TRAFD1-206ENST00000549358 CMTR2Q8IYT2 770 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms