RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 AK8Q96MA6 479 aa12.25□□□□□ -0.45
LINC00661-204ENST00000549354 TCP10L2B9ZVM9 353 aa12.25□□□□□ -0.45
LINC00661-204ENST00000549354 SPAG1Q07617 926 aa12.25□□□□□ -0.45
LINC00661-204ENST00000549354 TNIP1Q15025 636 aa12.25□□□□□ -0.45
LINC00661-204ENST00000549354 SPA17Q15506 151 aa12.25□□□□□ -0.45
LINC00661-204ENST00000549354 MAEAQ7L5Y9 396 aa12.25□□□□□ -0.45
LINC00661-204ENST00000549354 TRAPPC11Q7Z392 1133 aa12.25□□□□□ -0.45
LINC00661-204ENST00000549354 TEX2Q8IWB9 1127 aa12.25□□□□□ -0.45
LINC00661-204ENST00000549354 CCDC51Q96ER9 411 aa12.25□□□□□ -0.45
LINC00661-204ENST00000549354 LRRC1Q9BTT6 524 aa12.25□□□□□ -0.45
LINC00661-204ENST00000549354 TRIM31Q9BZY9 425 aa12.25□□□□□ -0.45
LINC00661-204ENST00000549354 ACBD3Q9H3P7 528 aa12.25□□□□□ -0.45
LINC00661-204ENST00000549354 BCAS3Q9H6U6 928 aa12.25□□□□□ -0.45
LINC00661-204ENST00000549354 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.25□□□□□ -0.45
LINC00661-204ENST00000549354 DISC1Q9NRI5 854 aa12.25□□□□□ -0.45
LINC00661-204ENST00000549354 HPCAL4Q9UM19 191 aa12.25□□□□□ -0.45
LINC00661-204ENST00000549354 CEP350Q5VT06 3117 aa12.25□□□□□ -0.45
LINC00661-204ENST00000549354 SFI1A8K8P3 1242 aa12.24□□□□□ -0.45
LINC00661-204ENST00000549354 GH2P01242 217 aa12.24□□□□□ -0.45
LINC00661-204ENST00000549354 SLC1A4P43007 532 aa12.24□□□□□ -0.45
LINC00661-204ENST00000549354 GFPT1Q06210 699 aaPredicted RBP12.24□□□□□ -0.45
LINC00661-204ENST00000549354 SH2D3CQ8N5H7 860 aa12.24□□□□□ -0.45
LINC00661-204ENST00000549354 MTMR9Q96QG7 549 aa12.24□□□□□ -0.45
LINC00661-204ENST00000549354 SEPT11Q9NVA2 429 aaKnown RBP12.24□□□□□ -0.45
LINC00661-204ENST00000549354 PKD2L1Q9P0L9 805 aa12.24□□□□□ -0.45
LINC00661-204ENST00000549354 CAPN6Q9Y6Q1 641 aa12.24□□□□□ -0.45
LINC00661-204ENST00000549354 GDF11O95390 407 aa12.24□□□□□ -0.45
LINC00661-204ENST00000549354 IVLP07476 585 aa12.24□□□□□ -0.45
LINC00661-204ENST00000549354 PTGER2P43116 358 aa12.24□□□□□ -0.45
LINC00661-204ENST00000549354 UBXN2AP68543 259 aa12.24□□□□□ -0.45
LINC00661-204ENST00000549354 NAALADL2Q58DX5 795 aa12.24□□□□□ -0.45
LINC00661-204ENST00000549354 KLHL7Q8IXQ5 586 aa12.24□□□□□ -0.45
LINC00661-204ENST00000549354 IKZF4Q9H2S9 585 aa12.24□□□□□ -0.45
LINC00661-204ENST00000549354 HAUS4Q9H6D7 363 aa12.24□□□□□ -0.45
LINC00661-204ENST00000549354 CLRN2A0PK11 232 aa12.24□□□□□ -0.45
LINC00661-204ENST00000549354 GOLGA6CA6NDK9 693 aa12.24□□□□□ -0.45
LINC00661-204ENST00000549354 TRAF5O00463 557 aa12.24□□□□□ -0.45
LINC00661-204ENST00000549354 WNT10BO00744 389 aa12.24□□□□□ -0.45
LINC00661-204ENST00000549354 NDUFB10O96000 172 aa12.24□□□□□ -0.45
LINC00661-204ENST00000549354 GOLGA6DP0CG33 693 aa12.24□□□□□ -0.45
LINC00661-204ENST00000549354 CYP4A11Q02928 519 aa12.24□□□□□ -0.45
LINC00661-204ENST00000549354 KIF5AQ12840 1032 aa12.24□□□□□ -0.45
LINC00661-204ENST00000549354 SEMA3FQ13275 785 aa12.24□□□□□ -0.45
LINC00661-204ENST00000549354 PPP4R3AQ6IN85 833 aa12.24□□□□□ -0.45
LINC00661-204ENST00000549354 GOLGA6AQ9NYA3 693 aa12.24□□□□□ -0.45
LINC00661-204ENST00000549354 TMX2Q9Y320 296 aa12.24□□□□□ -0.45
LINC00661-204ENST00000549354 A0A1W2PRG0 241 aa12.23□□□□□ -0.45
LINC00661-204ENST00000549354 GOLGA6BA6NDN3 693 aa12.23□□□□□ -0.45
LINC00661-204ENST00000549354 LGALS16A8MUM7 142 aa12.23□□□□□ -0.45
LINC00661-204ENST00000549354 OR52Z1P0C646 297 aa12.23□□□□□ -0.45
LINC00661-204ENST00000549354 MRPL12P52815 198 aaKnown RBP12.23□□□□□ -0.45
LINC00661-204ENST00000549354 TRADDQ15628 312 aa12.23□□□□□ -0.45
LINC00661-204ENST00000549354 CCDC40Q4G0X9 1142 aa12.23□□□□□ -0.45
LINC00661-204ENST00000549354 NAA35Q5VZE5 725 aa12.23□□□□□ -0.45
LINC00661-204ENST00000549354 ADSSL1Q8N142 457 aa12.23□□□□□ -0.45
LINC00661-204ENST00000549354 JDP2Q8WYK2 163 aa12.23□□□□□ -0.45
LINC00661-204ENST00000549354 SH2D3AQ9BRG2 576 aa12.23□□□□□ -0.45
LINC00661-204ENST00000549354 MYOZ2Q9NPC6 264 aa12.23□□□□□ -0.45
LINC00661-204ENST00000549354 LRRC10BA6NIK2 292 aa12.23□□□□□ -0.45
LINC00661-204ENST00000549354 H7C1D1 291 aa12.23□□□□□ -0.45
LINC00661-204ENST00000549354 QRICH1Q2TAL8 776 aa12.23□□□□□ -0.45
LINC00661-204ENST00000549354 USH1GQ495M9 461 aa12.23□□□□□ -0.45
LINC00661-204ENST00000549354 MCTP2Q6DN12 878 aa12.23□□□□□ -0.45
LINC00661-204ENST00000549354 CUL5Q93034 780 aa12.23□□□□□ -0.45
LINC00661-204ENST00000549354 CHORDC1Q9UHD1 332 aaPredicted RBP12.23□□□□□ -0.45
LINC00661-204ENST00000549354 MYH10P35580 1976 aa12.23□□□□□ -0.45
LINC00661-204ENST00000549354 FZD9O00144 591 aa12.22□□□□□ -0.45
LINC00661-204ENST00000549354 ZNF263O14978 683 aa12.22□□□□□ -0.45
LINC00661-204ENST00000549354 PLA2G6O60733 806 aa12.22□□□□□ -0.45
LINC00661-204ENST00000549354 STAT3P40763 770 aa12.22□□□□□ -0.45
LINC00661-204ENST00000549354 NOP2P46087 812 aaKnown RBP12.22□□□□□ -0.45
LINC00661-204ENST00000549354 TTC31Q49AM3 519 aaPredicted RBP12.22□□□□□ -0.45
LINC00661-204ENST00000549354 RDH13Q8NBN7 331 aa12.22□□□□□ -0.45
LINC00661-204ENST00000549354 IFIH1Q9BYX4 1025 aaKnown RBP12.22□□□□□ -0.45
LINC00661-204ENST00000549354 TSPYL1Q9H0U9 437 aa12.22□□□□□ -0.45
LINC00661-204ENST00000549354 RMND1Q9NWS8 449 aa12.22□□□□□ -0.45
LINC00661-204ENST00000549354 PSD3Q9NYI0 1048 aa12.22□□□□□ -0.45
LINC00661-204ENST00000549354 SMIM23A6NLE4 172 aa12.22□□□□□ -0.45
LINC00661-204ENST00000549354 USP17L15C9J2P7 530 aa12.22□□□□□ -0.45
LINC00661-204ENST00000549354 USP17L13C9JLJ4 530 aa12.22□□□□□ -0.45
LINC00661-204ENST00000549354 USP17L11C9JVI0 530 aa12.22□□□□□ -0.45
LINC00661-204ENST00000549354 USP17L18D6R9N7 530 aa12.22□□□□□ -0.45
LINC00661-204ENST00000549354 USP17L22D6RA61 530 aa12.22□□□□□ -0.45
LINC00661-204ENST00000549354 USP17L17D6RBQ6 530 aa12.22□□□□□ -0.45
LINC00661-204ENST00000549354 USP17L19D6RCP7 530 aa12.22□□□□□ -0.45
LINC00661-204ENST00000549354 USP17L20D6RJB6 530 aa12.22□□□□□ -0.45
LINC00661-204ENST00000549354 RBAK-RBAKDNI3L0D1 243 aa12.22□□□□□ -0.45
LINC00661-204ENST00000549354 HGSO14964 777 aaPredicted RBP12.22□□□□□ -0.45
LINC00661-204ENST00000549354 MYL1P05976 194 aa12.22□□□□□ -0.45
LINC00661-204ENST00000549354 HPDP32754 393 aaPredicted RBP12.22□□□□□ -0.45
LINC00661-204ENST00000549354 CYLC1P35663 651 aaPredicted RBP12.22□□□□□ -0.45
LINC00661-204ENST00000549354 EIF4A3P38919 411 aaKnown RBP12.22□□□□□ -0.45
LINC00661-204ENST00000549354 EPS15P42566 896 aa12.22□□□□□ -0.45
LINC00661-204ENST00000549354 USP17L24Q0WX57 530 aa12.22□□□□□ -0.45
LINC00661-204ENST00000549354 RAPGEF1Q13905 1077 aa12.22□□□□□ -0.45
LINC00661-204ENST00000549354 USP17L6PQ6QN14 398 aa12.22□□□□□ -0.45
LINC00661-204ENST00000549354 SNX29Q8TEQ0 813 aa12.22□□□□□ -0.45
LINC00661-204ENST00000549354 SECISBP2LQ93073 1101 aaKnown RBP12.22□□□□□ -0.45
LINC00661-204ENST00000549354 ELMO3Q96BJ8 720 aa12.22□□□□□ -0.45
LINC00661-204ENST00000549354 ZBTB21Q9ULJ3 1066 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms