RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 DDX11L8A8MPP1 907 aa10.98□□□□□ -0.65
SMARCD1-206ENST00000549274 EDIL3O43854 480 aa10.98□□□□□ -0.65
SMARCD1-206ENST00000549274 FARP2O94887 1054 aaPredicted RBP10.98□□□□□ -0.65
SMARCD1-206ENST00000549274 UBA7P41226 1012 aa10.98□□□□□ -0.65
SMARCD1-206ENST00000549274 GJA9P57773 515 aa10.98□□□□□ -0.65
SMARCD1-206ENST00000549274 NKX3-2P78367 333 aa10.98□□□□□ -0.65
SMARCD1-206ENST00000549274 SEMA3FQ13275 785 aa10.98□□□□□ -0.65
SMARCD1-206ENST00000549274 EPHA7Q15375 998 aa10.98□□□□□ -0.65
SMARCD1-206ENST00000549274 DGKDQ16760 1214 aa10.98□□□□□ -0.65
SMARCD1-206ENST00000549274 FOXD4L6Q3SYB3 417 aaPredicted RBP10.98□□□□□ -0.65
SMARCD1-206ENST00000549274 ADALQ6DHV7 355 aa10.98□□□□□ -0.65
SMARCD1-206ENST00000549274 FAM173BQ6P4H8 233 aa10.98□□□□□ -0.65
SMARCD1-206ENST00000549274 FOXD4L3Q6VB84 417 aaPredicted RBP10.98□□□□□ -0.65
SMARCD1-206ENST00000549274 CYFIP1Q7L576 1253 aa10.98□□□□□ -0.65
SMARCD1-206ENST00000549274 MIER3Q7Z3K6 550 aa10.98□□□□□ -0.65
SMARCD1-206ENST00000549274 RNF180Q86T96 592 aa10.98□□□□□ -0.65
SMARCD1-206ENST00000549274 TLK2Q86UE8 772 aa10.98□□□□□ -0.65
SMARCD1-206ENST00000549274 C4orf32Q8N8J7 132 aa10.98□□□□□ -0.65
SMARCD1-206ENST00000549274 IGSF22Q8N9C0 903 aa10.98□□□□□ -0.65
SMARCD1-206ENST00000549274 PCSK9Q8NBP7 692 aaKnown RBP10.98□□□□□ -0.65
SMARCD1-206ENST00000549274 ARRDC4Q8NCT1 418 aa10.98□□□□□ -0.65
SMARCD1-206ENST00000549274 CYP2W1Q8TAV3 490 aa10.98□□□□□ -0.65
SMARCD1-206ENST00000549274 HAS1Q92839 578 aa10.98□□□□□ -0.65
SMARCD1-206ENST00000549274 CALML4Q96GE6 196 aa10.98□□□□□ -0.65
SMARCD1-206ENST00000549274 CDK5RAP3Q96JB5 506 aa10.98□□□□□ -0.65
SMARCD1-206ENST00000549274 FAM167AQ96KS9 214 aa10.98□□□□□ -0.65
SMARCD1-206ENST00000549274 SPATA33Q96N06 139 aa10.98□□□□□ -0.65
SMARCD1-206ENST00000549274 SEZ6LQ9BYH1 1024 aa10.98□□□□□ -0.65
SMARCD1-206ENST00000549274 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.98□□□□□ -0.65
SMARCD1-206ENST00000549274 TMEM60Q9H2L4 133 aa10.98□□□□□ -0.65
SMARCD1-206ENST00000549274 AZI2Q9H6S1 392 aa10.98□□□□□ -0.65
SMARCD1-206ENST00000549274 TUFT1Q9NNX1 390 aa10.98□□□□□ -0.65
SMARCD1-206ENST00000549274 CCDC39Q9UFE4 941 aa10.98□□□□□ -0.65
SMARCD1-206ENST00000549274 ZNF215Q9UL58 517 aaPredicted RBP10.98□□□□□ -0.65
SMARCD1-206ENST00000549274 PCDHA10Q9Y5I2 948 aa10.98□□□□□ -0.65
SMARCD1-206ENST00000549274 WDR81Q562E7 1941 aa10.97□□□□□ -0.65
SMARCD1-206ENST00000549274 A0A1W2PQ27 194 aa10.97□□□□□ -0.65
SMARCD1-206ENST00000549274 A0A1W2PQ64 194 aa10.97□□□□□ -0.65
SMARCD1-206ENST00000549274 A0A1W2PQD8 194 aa10.97□□□□□ -0.65
SMARCD1-206ENST00000549274 VWA3AA6NCI4 1184 aa10.97□□□□□ -0.65
SMARCD1-206ENST00000549274 PPFIA4O75335 1185 aa10.97□□□□□ -0.65
SMARCD1-206ENST00000549274 CABYRO75952 493 aa10.97□□□□□ -0.65
SMARCD1-206ENST00000549274 P4HBP07237 508 aaKnown RBP10.97□□□□□ -0.65
SMARCD1-206ENST00000549274 CST5P28325 142 aaPredicted RBP10.97□□□□□ -0.65
SMARCD1-206ENST00000549274 TECP42680 631 aa10.97□□□□□ -0.65
SMARCD1-206ENST00000549274 CAP1Q01518 475 aa10.97□□□□□ -0.65
SMARCD1-206ENST00000549274 ARHGAP1Q07960 439 aa10.97□□□□□ -0.65
SMARCD1-206ENST00000549274 LY6KQ17RY6 165 aa10.97□□□□□ -0.65
SMARCD1-206ENST00000549274 NCAPH2Q6IBW4 605 aa10.97□□□□□ -0.65
SMARCD1-206ENST00000549274 EXOC8Q8IYI6 725 aa10.97□□□□□ -0.65
SMARCD1-206ENST00000549274 RASSF8Q8NHQ8 419 aa10.97□□□□□ -0.65
SMARCD1-206ENST00000549274 TSEN34Q9BSV6 310 aaKnown RBP10.97□□□□□ -0.65
SMARCD1-206ENST00000549274 UPF3AQ9H1J1 476 aaKnown RBP10.97□□□□□ -0.65
SMARCD1-206ENST00000549274 CUEDC2Q9H467 287 aa10.97□□□□□ -0.65
SMARCD1-206ENST00000549274 SMARCAD1Q9H4L7 1026 aa10.97□□□□□ -0.65
SMARCD1-206ENST00000549274 XPNPEP3Q9NQH7 507 aa10.97□□□□□ -0.65
SMARCD1-206ENST00000549274 DISC1Q9NRI5 854 aa10.97□□□□□ -0.65
SMARCD1-206ENST00000549274 USP25Q9UHP3 1055 aa10.97□□□□□ -0.65
SMARCD1-206ENST00000549274 FBXO2Q9UK22 296 aaPredicted RBP10.97□□□□□ -0.65
SMARCD1-206ENST00000549274 VAV3Q9UKW4 847 aa10.97□□□□□ -0.65
SMARCD1-206ENST00000549274 GNEQ9Y223 722 aaKnown RBP10.97□□□□□ -0.65
SMARCD1-206ENST00000549274 PPME1Q9Y570 386 aa10.97□□□□□ -0.65
SMARCD1-206ENST00000549274 EMSYQ7Z589 1322 aa10.97□□□□□ -0.65
SMARCD1-206ENST00000549274 FRMPD3Q5JV73 1810 aa10.97□□□□□ -0.65
SMARCD1-206ENST00000549274 DOCK5Q9H7D0 1870 aa10.97□□□□□ -0.65
SMARCD1-206ENST00000549274 KAT6AQ92794 2004 aa10.97□□□□□ -0.65
SMARCD1-206ENST00000549274 MOXD2PA6NHM9 499 aa10.96□□□□□ -0.65
SMARCD1-206ENST00000549274 A6NJR5 290 aa10.96□□□□□ -0.65
SMARCD1-206ENST00000549274 DHX15O43143 795 aaKnown RBP10.96□□□□□ -0.65
SMARCD1-206ENST00000549274 DYNC1LI2O43237 492 aaPredicted RBP10.96□□□□□ -0.65
SMARCD1-206ENST00000549274 ATP9AO75110 1047 aa10.96□□□□□ -0.65
SMARCD1-206ENST00000549274 ATG7O95352 703 aa10.96□□□□□ -0.65
SMARCD1-206ENST00000549274 ARIH2O95376 493 aa10.96□□□□□ -0.65
SMARCD1-206ENST00000549274 SUPT20HL2P0C7V6 817 aa10.96□□□□□ -0.65
SMARCD1-206ENST00000549274 HOXD8P13378 290 aaPredicted RBP10.96□□□□□ -0.65
SMARCD1-206ENST00000549274 SMPD1P17405 629 aa10.96□□□□□ -0.65
SMARCD1-206ENST00000549274 CMA1P23946 247 aa10.96□□□□□ -0.65
SMARCD1-206ENST00000549274 RPA1P27694 616 aa10.96□□□□□ -0.65
SMARCD1-206ENST00000549274 MARCKSP29966 332 aaPredicted RBP10.96□□□□□ -0.65
SMARCD1-206ENST00000549274 QARSP47897 775 aaKnown RBP10.96□□□□□ -0.65
SMARCD1-206ENST00000549274 ACTR2P61160 394 aa10.96□□□□□ -0.65
SMARCD1-206ENST00000549274 UBE2HP62256 183 aa10.96□□□□□ -0.65
SMARCD1-206ENST00000549274 ITGB3BPQ13352 177 aaPredicted RBP10.96□□□□□ -0.65
SMARCD1-206ENST00000549274 PRAMEF19Q5SWL8 479 aa10.96□□□□□ -0.65
SMARCD1-206ENST00000549274 B3GNT9Q6UX72 402 aa10.96□□□□□ -0.65
SMARCD1-206ENST00000549274 CCDC73Q6ZRK6 1079 aa10.96□□□□□ -0.65
SMARCD1-206ENST00000549274 PLPPR4Q7Z2D5 763 aa10.96□□□□□ -0.65
SMARCD1-206ENST00000549274 SH3TC2Q8TF17 1288 aa10.96□□□□□ -0.65
SMARCD1-206ENST00000549274 ZNF333Q96JL9 665 aa10.96□□□□□ -0.65
SMARCD1-206ENST00000549274 POLR3CQ9BUI4 534 aaPredicted RBP10.96□□□□□ -0.65
SMARCD1-206ENST00000549274 TMEM106CQ9BVX2 250 aa10.96□□□□□ -0.65
SMARCD1-206ENST00000549274 CCSER1Q9C0I3 900 aa10.96□□□□□ -0.65
SMARCD1-206ENST00000549274 UNC45AQ9H3U1 944 aa10.96□□□□□ -0.65
SMARCD1-206ENST00000549274 ZSWIM4Q9H7M6 989 aa10.96□□□□□ -0.65
SMARCD1-206ENST00000549274 MAGEF1Q9HAY2 307 aa10.96□□□□□ -0.65
SMARCD1-206ENST00000549274 PAK6Q9NQU5 681 aaPredicted RBP10.96□□□□□ -0.65
SMARCD1-206ENST00000549274 PDGFCQ9NRA1 345 aa10.96□□□□□ -0.65
SMARCD1-206ENST00000549274 KBTBD13C9JR72 458 aa10.95□□□□□ -0.66
SMARCD1-206ENST00000549274 DDX39AO00148 427 aaKnown RBP10.95□□□□□ -0.66
SMARCD1-206ENST00000549274 WNT7AO00755 349 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms