RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 CROTQ9UKG9 612 aa6.46□□□□□ -1.38
CCDC38-206ENST00000548771 C1QTNF3-AMACRE9PGA6 284 aa6.45□□□□□ -1.38
CCDC38-206ENST00000548771 CHGBP05060 677 aa6.45□□□□□ -1.38
CCDC38-206ENST00000548771 SPIRE1Q08AE8 756 aa6.45□□□□□ -1.38
CCDC38-206ENST00000548771 SURF1Q15526 300 aa6.45□□□□□ -1.38
CCDC38-206ENST00000548771 SCUBE1Q8IWY4 988 aa6.45□□□□□ -1.38
CCDC38-206ENST00000548771 CKAP2LQ8IYA6 745 aa6.45□□□□□ -1.38
CCDC38-206ENST00000548771 KLHL36Q8N4N3 616 aa6.45□□□□□ -1.38
CCDC38-206ENST00000548771 ZBTB38Q8NAP3 1195 aaPredicted RBP6.45□□□□□ -1.38
CCDC38-206ENST00000548771 TRIM55Q9BYV6 548 aa6.45□□□□□ -1.38
CCDC38-206ENST00000548771 ADAM29Q9UKF5 820 aa6.45□□□□□ -1.38
CCDC38-206ENST00000548771 DSEQ9UL01 958 aa6.45□□□□□ -1.38
CCDC38-206ENST00000548771 FAM47E-STBD1D6RA91 191 aa6.44□□□□□ -1.38
CCDC38-206ENST00000548771 LAMTOR5O43504 91 aa6.44□□□□□ -1.38
CCDC38-206ENST00000548771 KNG1P01042 644 aa6.44□□□□□ -1.38
CCDC38-206ENST00000548771 CYP1A1P04798 512 aaPredicted RBP6.44□□□□□ -1.38
CCDC38-206ENST00000548771 CKMP06732 381 aa6.44□□□□□ -1.38
CCDC38-206ENST00000548771 GNAT1P11488 350 aa6.44□□□□□ -1.38
CCDC38-206ENST00000548771 NFATC3Q12968 1075 aa6.44□□□□□ -1.38
CCDC38-206ENST00000548771 SERINC3Q13530 473 aa6.44□□□□□ -1.38
CCDC38-206ENST00000548771 CD276Q5ZPR3 534 aa6.44□□□□□ -1.38
CCDC38-206ENST00000548771 CPZQ66K79 652 aa6.44□□□□□ -1.38
CCDC38-206ENST00000548771 KCTD1Q719H9 257 aa6.44□□□□□ -1.38
CCDC38-206ENST00000548771 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.44□□□□□ -1.38
CCDC38-206ENST00000548771 IGDCC4Q8TDY8 1250 aa6.44□□□□□ -1.38
CCDC38-206ENST00000548771 KCNJ15Q99712 375 aa6.44□□□□□ -1.38
CCDC38-206ENST00000548771 KCND1Q9NSA2 647 aa6.44□□□□□ -1.38
CCDC38-206ENST00000548771 SRRDQ9UH36 339 aa6.44□□□□□ -1.38
CCDC38-206ENST00000548771 TRAF6Q9Y4K3 522 aa6.44□□□□□ -1.38
CCDC38-206ENST00000548771 IL18BPO95998 194 aa6.43□□□□□ -1.38
CCDC38-206ENST00000548771 ENO2P09104 434 aaPredicted RBP6.43□□□□□ -1.38
CCDC38-206ENST00000548771 EPHB4P54760 987 aa6.43□□□□□ -1.38
CCDC38-206ENST00000548771 PPP2CBP62714 309 aa6.43□□□□□ -1.38
CCDC38-206ENST00000548771 PPP2CAP67775 309 aa6.43□□□□□ -1.38
CCDC38-206ENST00000548771 VASNQ6EMK4 673 aa6.43□□□□□ -1.38
CCDC38-206ENST00000548771 DPH6Q7L8W6 267 aa6.43□□□□□ -1.38
CCDC38-206ENST00000548771 MAMDC2Q7Z304 686 aaPredicted RBP6.43□□□□□ -1.38
CCDC38-206ENST00000548771 LIMS2Q7Z4I7 341 aa6.43□□□□□ -1.38
CCDC38-206ENST00000548771 NUDT10Q8NFP7 164 aa6.43□□□□□ -1.38
CCDC38-206ENST00000548771 DNERQ8NFT8 737 aa6.43□□□□□ -1.38
CCDC38-206ENST00000548771 NUDT11Q96G61 164 aa6.43□□□□□ -1.38
CCDC38-206ENST00000548771 SORCS2Q96PQ0 1159 aa6.43□□□□□ -1.38
CCDC38-206ENST00000548771 CD248Q9HCU0 757 aa6.43□□□□□ -1.38
CCDC38-206ENST00000548771 NUB1Q9Y5A7 615 aa6.43□□□□□ -1.38
CCDC38-206ENST00000548771 ZNF839A8K0R7 811 aa6.42□□□□□ -1.38
CCDC38-206ENST00000548771 GPR42O15529 346 aa6.42□□□□□ -1.38
CCDC38-206ENST00000548771 ZNF20P17024 532 aa6.42□□□□□ -1.38
CCDC38-206ENST00000548771 PFKPQ01813 784 aa6.42□□□□□ -1.38
CCDC38-206ENST00000548771 RBL2Q08999 1139 aa6.42□□□□□ -1.38
CCDC38-206ENST00000548771 SMAD2Q15796 467 aaKnown RBP6.42□□□□□ -1.38
CCDC38-206ENST00000548771 LONRF2Q1L5Z9 754 aa6.42□□□□□ -1.38
CCDC38-206ENST00000548771 FAM209AQ5JX71 171 aa6.42□□□□□ -1.38
CCDC38-206ENST00000548771 PHF19Q5T6S3 580 aa6.42□□□□□ -1.38
CCDC38-206ENST00000548771 TRMT10BQ6PF06 316 aaKnown RBP6.42□□□□□ -1.38
CCDC38-206ENST00000548771 PLEKHH3Q7Z736 793 aa6.42□□□□□ -1.38
CCDC38-206ENST00000548771 KBTBD2Q8IY47 623 aa6.42□□□□□ -1.38
CCDC38-206ENST00000548771 PTPRN2Q92932 1015 aa6.42□□□□□ -1.38
CCDC38-206ENST00000548771 AJUBAQ96IF1 538 aa6.42□□□□□ -1.38
CCDC38-206ENST00000548771 EXOC2Q96KP1 924 aa6.42□□□□□ -1.38
CCDC38-206ENST00000548771 C8orf49Q96NF6 230 aa6.42□□□□□ -1.38
CCDC38-206ENST00000548771 SIRPGQ9P1W8 387 aa6.42□□□□□ -1.38
CCDC38-206ENST00000548771 FTSJ1Q9UET6 329 aa6.42□□□□□ -1.38
CCDC38-206ENST00000548771 ARVCFO00192 962 aa6.41□□□□□ -1.38
CCDC38-206ENST00000548771 DIAPH1O60610 1272 aaKnown RBP6.41□□□□□ -1.38
CCDC38-206ENST00000548771 AMY2AP04746 511 aa6.41□□□□□ -1.38
CCDC38-206ENST00000548771 AMY2BP19961 511 aa6.41□□□□□ -1.38
CCDC38-206ENST00000548771 SKIDA1Q1XH10 827 aa6.41□□□□□ -1.38
CCDC38-206ENST00000548771 PCDH19Q8TAB3 1148 aa6.41□□□□□ -1.38
CCDC38-206ENST00000548771 KISS1RQ969F8 398 aaPredicted RBP6.41□□□□□ -1.38
CCDC38-206ENST00000548771 LOXL4Q96JB6 756 aa6.41□□□□□ -1.38
CCDC38-206ENST00000548771 C8orf37Q96NL8 207 aa6.41□□□□□ -1.38
CCDC38-206ENST00000548771 KATNBL1Q9H079 304 aa6.41□□□□□ -1.38
CCDC38-206ENST00000548771 TRBV23-1A0A0A0MS06 115 aa6.4□□□□□ -1.38
CCDC38-206ENST00000548771 AQP7O14520 342 aa6.4□□□□□ -1.38
CCDC38-206ENST00000548771 SLPIP03973 132 aa6.4□□□□□ -1.38
CCDC38-206ENST00000548771 FAM153BP0C7A2 387 aa6.4□□□□□ -1.38
CCDC38-206ENST00000548771 PAK1Q13153 545 aa6.4□□□□□ -1.38
CCDC38-206ENST00000548771 RASA3Q14644 834 aa6.4□□□□□ -1.38
CCDC38-206ENST00000548771 CDSNQ15517 529 aa6.4□□□□□ -1.38
CCDC38-206ENST00000548771 MTERF2Q49AM1 385 aa6.4□□□□□ -1.38
CCDC38-206ENST00000548771 GLB1LQ6UWU2 654 aa6.4□□□□□ -1.38
CCDC38-206ENST00000548771 Q6ZUG5 572 aa6.4□□□□□ -1.38
CCDC38-206ENST00000548771 ARMC5Q96C12 935 aa6.4□□□□□ -1.38
CCDC38-206ENST00000548771 ALG1Q9BT22 464 aa6.4□□□□□ -1.38
CCDC38-206ENST00000548771 MEGF9Q9H1U4 602 aa6.4□□□□□ -1.38
CCDC38-206ENST00000548771 BARX1Q9HBU1 254 aaPredicted RBP6.4□□□□□ -1.38
CCDC38-206ENST00000548771 SRPK3Q9UPE1 567 aa6.4□□□□□ -1.38
CCDC38-206ENST00000548771 PCDHA8Q9Y5H6 950 aa6.4□□□□□ -1.38
CCDC38-206ENST00000548771 ZNF536O15090 1300 aa6.4□□□□□ -1.39
CCDC38-206ENST00000548771 FAM90A27PA6NNH2 459 aa6.39□□□□□ -1.39
CCDC38-206ENST00000548771 B4GALT4O60513 344 aa6.39□□□□□ -1.39
CCDC38-206ENST00000548771 ATP2B1P20020 1258 aa6.39□□□□□ -1.39
CCDC38-206ENST00000548771 HMGA2P52926 109 aa6.39□□□□□ -1.39
CCDC38-206ENST00000548771 SUMO1P63165 101 aaKnown RBP6.39□□□□□ -1.39
CCDC38-206ENST00000548771 SSRP1Q08945 709 aaKnown RBP6.39□□□□□ -1.39
CCDC38-206ENST00000548771 DBPQ10586 325 aaPredicted RBP6.39□□□□□ -1.39
CCDC38-206ENST00000548771 ICAM4Q14773 271 aa6.39□□□□□ -1.39
CCDC38-206ENST00000548771 C16orf59Q7L2K0 433 aa6.39□□□□□ -1.39
CCDC38-206ENST00000548771 LRP10Q7Z4F1 713 aa6.39□□□□□ -1.39
CCDC38-206ENST00000548771 Q8N1X5 172 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms