RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 TCF7P36402 384 aaPredicted RBP12.86□□□□□ -0.35
CALCOCO1-208ENST00000547988 ACTR2P61160 394 aa12.86□□□□□ -0.35
CALCOCO1-208ENST00000547988 SP4Q02446 784 aa12.86□□□□□ -0.35
CALCOCO1-208ENST00000547988 SLC39A5Q6ZMH5 540 aa12.86□□□□□ -0.35
CALCOCO1-208ENST00000547988 SMAP1Q8IYB5 467 aaPredicted RBP12.86□□□□□ -0.35
CALCOCO1-208ENST00000547988 MTMR6Q9Y217 621 aa12.86□□□□□ -0.35
CALCOCO1-208ENST00000547988 MROH7Q68CQ1 1323 aa12.86□□□□□ -0.35
CALCOCO1-208ENST00000547988 GSTTP1A0A1W2PQM5 241 aa12.85□□□□□ -0.35
CALCOCO1-208ENST00000547988 MARCH6O60337 910 aa12.85□□□□□ -0.35
CALCOCO1-208ENST00000547988 ATG7O95352 703 aa12.85□□□□□ -0.35
CALCOCO1-208ENST00000547988 CCNE2O96020 404 aa12.85□□□□□ -0.35
CALCOCO1-208ENST00000547988 ZNF286BP0CG31 522 aa12.85□□□□□ -0.35
CALCOCO1-208ENST00000547988 ATP2B1P20020 1258 aa12.85□□□□□ -0.35
CALCOCO1-208ENST00000547988 SFNP31947 248 aa12.85□□□□□ -0.35
CALCOCO1-208ENST00000547988 MCM7P33993 719 aa12.85□□□□□ -0.35
CALCOCO1-208ENST00000547988 ANP32AP39687 249 aaKnown RBP12.85□□□□□ -0.35
CALCOCO1-208ENST00000547988 TOB1P50616 345 aaPredicted RBP12.85□□□□□ -0.35
CALCOCO1-208ENST00000547988 ITGA7Q13683 1181 aa12.85□□□□□ -0.35
CALCOCO1-208ENST00000547988 CALCRLQ16602 461 aa12.85□□□□□ -0.35
CALCOCO1-208ENST00000547988 FERMT3Q86UX7 667 aa12.85□□□□□ -0.35
CALCOCO1-208ENST00000547988 SPRYD3Q8NCJ5 442 aa12.85□□□□□ -0.35
CALCOCO1-208ENST00000547988 RDM1Q8NG50 284 aa12.85□□□□□ -0.35
CALCOCO1-208ENST00000547988 KAT2BQ92831 832 aa12.85□□□□□ -0.35
CALCOCO1-208ENST00000547988 HAS1Q92839 578 aa12.85□□□□□ -0.35
CALCOCO1-208ENST00000547988 VTI1AQ96AJ9 217 aa12.85□□□□□ -0.35
CALCOCO1-208ENST00000547988 C16orf70Q9BSU1 422 aa12.85□□□□□ -0.35
CALCOCO1-208ENST00000547988 ZSCAN16Q9H4T2 348 aaPredicted RBP12.85□□□□□ -0.35
CALCOCO1-208ENST00000547988 ZNF215Q9UL58 517 aaPredicted RBP12.85□□□□□ -0.35
CALCOCO1-208ENST00000547988 TELO2Q9Y4R8 837 aa12.85□□□□□ -0.35
CALCOCO1-208ENST00000547988 PDE4DIPQ5VU43 2346 aa12.85□□□□□ -0.35
CALCOCO1-208ENST00000547988 IGKV6D-21A0A0A0MT36 114 aa12.84□□□□□ -0.35
CALCOCO1-208ENST00000547988 WDR64B1ANS9 1081 aa12.84□□□□□ -0.35
CALCOCO1-208ENST00000547988 H3BRB1 525 aa12.84□□□□□ -0.35
CALCOCO1-208ENST00000547988 ARVCFO00192 962 aa12.84□□□□□ -0.35
CALCOCO1-208ENST00000547988 HAS3O00219 553 aa12.84□□□□□ -0.35
CALCOCO1-208ENST00000547988 LAD1O00515 517 aa12.84□□□□□ -0.35
CALCOCO1-208ENST00000547988 LGR5O75473 907 aa12.84□□□□□ -0.35
CALCOCO1-208ENST00000547988 SUPT20HL2P0C7V6 817 aa12.84□□□□□ -0.35
CALCOCO1-208ENST00000547988 JAK3P52333 1124 aa12.84□□□□□ -0.35
CALCOCO1-208ENST00000547988 RESTQ13127 1097 aa12.84□□□□□ -0.35
CALCOCO1-208ENST00000547988 PPP2R5CQ13362 524 aa12.84□□□□□ -0.35
CALCOCO1-208ENST00000547988 ZNF174Q15697 407 aa12.84□□□□□ -0.35
CALCOCO1-208ENST00000547988 MIS18BP1Q6P0N0 1132 aa12.84□□□□□ -0.35
CALCOCO1-208ENST00000547988 NFRKBQ6P4R8 1299 aa12.84□□□□□ -0.35
CALCOCO1-208ENST00000547988 B3GNT9Q6UX72 402 aa12.84□□□□□ -0.35
CALCOCO1-208ENST00000547988 ABHD15Q6UXT9 468 aa12.84□□□□□ -0.35
CALCOCO1-208ENST00000547988 SLC43A3Q8NBI5 491 aa12.84□□□□□ -0.35
CALCOCO1-208ENST00000547988 MTMR9Q96QG7 549 aa12.84□□□□□ -0.35
CALCOCO1-208ENST00000547988 UIMC1Q96RL1 719 aa12.84□□□□□ -0.35
CALCOCO1-208ENST00000547988 SMARCAD1Q9H4L7 1026 aa12.84□□□□□ -0.35
CALCOCO1-208ENST00000547988 TUT1Q9H6E5 874 aaKnown RBP12.84□□□□□ -0.35
CALCOCO1-208ENST00000547988 AZI2Q9H6S1 392 aa12.84□□□□□ -0.35
CALCOCO1-208ENST00000547988 PCDHA10Q9Y5I2 948 aa12.84□□□□□ -0.35
CALCOCO1-208ENST00000547988 PSAPP07602 524 aa12.83□□□□□ -0.36
CALCOCO1-208ENST00000547988 OR52Z1P0C646 297 aa12.83□□□□□ -0.36
CALCOCO1-208ENST00000547988 PSEN2P49810 448 aa12.83□□□□□ -0.36
CALCOCO1-208ENST00000547988 SLC26A2P50443 739 aa12.83□□□□□ -0.36
CALCOCO1-208ENST00000547988 ATN1P54259 1190 aaPredicted RBP12.83□□□□□ -0.36
CALCOCO1-208ENST00000547988 RTP1P59025 263 aa12.83□□□□□ -0.36
CALCOCO1-208ENST00000547988 PSMC6P62333 389 aa12.83□□□□□ -0.36
CALCOCO1-208ENST00000547988 PTPN11Q06124 597 aaPredicted RBP12.83□□□□□ -0.36
CALCOCO1-208ENST00000547988 MFSD10Q14728 455 aa12.83□□□□□ -0.36
CALCOCO1-208ENST00000547988 LRRC26Q2I0M4 334 aa12.83□□□□□ -0.36
CALCOCO1-208ENST00000547988 KIAA0753Q2KHM9 967 aa12.83□□□□□ -0.36
CALCOCO1-208ENST00000547988 UTP14CQ5TAP6 766 aaKnown RBP12.83□□□□□ -0.36
CALCOCO1-208ENST00000547988 FAM160B1Q5W0V3 765 aa12.83□□□□□ -0.36
CALCOCO1-208ENST00000547988 PLPPR4Q7Z2D5 763 aa12.83□□□□□ -0.36
CALCOCO1-208ENST00000547988 ANKRD33Q7Z3H0 272 aa12.83□□□□□ -0.36
CALCOCO1-208ENST00000547988 SESTD1Q86VW0 696 aa12.83□□□□□ -0.36
CALCOCO1-208ENST00000547988 AFAP1L1Q8TED9 768 aa12.83□□□□□ -0.36
CALCOCO1-208ENST00000547988 GJA10Q969M2 543 aa12.83□□□□□ -0.36
CALCOCO1-208ENST00000547988 TMEM60Q9H2L4 133 aa12.83□□□□□ -0.36
CALCOCO1-208ENST00000547988 UNC45AQ9H3U1 944 aa12.83□□□□□ -0.36
CALCOCO1-208ENST00000547988 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.83□□□□□ -0.36
CALCOCO1-208ENST00000547988 DISC1Q9NRI5 854 aa12.83□□□□□ -0.36
CALCOCO1-208ENST00000547988 ERAP1Q9NZ08 941 aa12.83□□□□□ -0.36
CALCOCO1-208ENST00000547988 VAV3Q9UKW4 847 aa12.83□□□□□ -0.36
CALCOCO1-208ENST00000547988 PCDHA12Q9UN75 941 aa12.83□□□□□ -0.36
CALCOCO1-208ENST00000547988 SAMM50Q9Y512 469 aa12.83□□□□□ -0.36
CALCOCO1-208ENST00000547988 PCDHB6Q9Y5E3 794 aa12.83□□□□□ -0.36
CALCOCO1-208ENST00000547988 GRIN2DO15399 1336 aa12.83□□□□□ -0.36
CALCOCO1-208ENST00000547988 MYH11P35749 1972 aa12.82□□□□□ -0.36
CALCOCO1-208ENST00000547988 BACH1O14867 736 aa12.82□□□□□ -0.36
CALCOCO1-208ENST00000547988 CHMP2AO43633 222 aa12.82□□□□□ -0.36
CALCOCO1-208ENST00000547988 BMP15O95972 392 aa12.82□□□□□ -0.36
CALCOCO1-208ENST00000547988 ZSCAN22P10073 491 aaPredicted RBP12.82□□□□□ -0.36
CALCOCO1-208ENST00000547988 CDK7P50613 346 aa12.82□□□□□ -0.36
CALCOCO1-208ENST00000547988 STAT5BP51692 787 aa12.82□□□□□ -0.36
CALCOCO1-208ENST00000547988 MLLT1Q03111 559 aaPredicted RBP12.82□□□□□ -0.36
CALCOCO1-208ENST00000547988 NBR1Q14596 966 aa12.82□□□□□ -0.36
CALCOCO1-208ENST00000547988 NBPF20Q3BBV1 942 aa12.82□□□□□ -0.36
CALCOCO1-208ENST00000547988 TRIM60Q495X7 471 aa12.82□□□□□ -0.36
CALCOCO1-208ENST00000547988 MIER3Q7Z3K6 550 aa12.82□□□□□ -0.36
CALCOCO1-208ENST00000547988 TRIM50Q86XT4 487 aa12.82□□□□□ -0.36
CALCOCO1-208ENST00000547988 GLG1Q92896 1179 aa12.82□□□□□ -0.36
CALCOCO1-208ENST00000547988 TOX2Q96NM4 488 aa12.82□□□□□ -0.36
CALCOCO1-208ENST00000547988 TTC12Q9H892 705 aaPredicted RBP12.82□□□□□ -0.36
CALCOCO1-208ENST00000547988 ZNF302Q9NR11 478 aa12.82□□□□□ -0.36
CALCOCO1-208ENST00000547988 SIP14410 1827 aa12.82□□□□□ -0.36
CALCOCO1-208ENST00000547988 IGSF9BQ9UPX0 1349 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms