RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 CEP72Q9P209 647 aa17.16■□□□□ 0.34
BRF1-212ENST00000547562 HERC5Q9UII4 1024 aaKnown RBP17.16■□□□□ 0.34
BRF1-212ENST00000547562 PRR12Q9ULL5 1215 aa17.16■□□□□ 0.34
BRF1-212ENST00000547562 PIK3CDO00329 1044 aa17.15■□□□□ 0.34
BRF1-212ENST00000547562 MSH4O15457 936 aa17.15■□□□□ 0.34
BRF1-212ENST00000547562 HOXA13P31271 388 aaPredicted RBP17.15■□□□□ 0.34
BRF1-212ENST00000547562 CKAP4Q07065 602 aaKnown RBP17.15■□□□□ 0.34
BRF1-212ENST00000547562 GIT2Q14161 759 aa17.15■□□□□ 0.34
BRF1-212ENST00000547562 EDRF1Q3B7T1 1238 aa17.15■□□□□ 0.34
BRF1-212ENST00000547562 SPICE1Q8N0Z3 855 aa17.15■□□□□ 0.34
BRF1-212ENST00000547562 SUPT20HQ8NEM7 779 aa17.15■□□□□ 0.34
BRF1-212ENST00000547562 TRIM58Q8NG06 486 aa17.15■□□□□ 0.34
BRF1-212ENST00000547562 RPGRIP1Q96KN7 1286 aa17.15■□□□□ 0.34
BRF1-212ENST00000547562 ZHX3Q9H4I2 956 aa17.15■□□□□ 0.34
BRF1-212ENST00000547562 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.15■□□□□ 0.34
BRF1-212ENST00000547562 TNS1Q9HBL0 1735 aaKnown RBP17.15■□□□□ 0.34
BRF1-212ENST00000547562 MEIS1O00470 390 aa17.15■□□□□ 0.34
BRF1-212ENST00000547562 PPIP5K2O43314 1243 aa17.15■□□□□ 0.34
BRF1-212ENST00000547562 NOL4O94818 638 aa17.15■□□□□ 0.34
BRF1-212ENST00000547562 PABPC4Q13310 644 aaKnown RBP eCLIP17.15■□□□□ 0.34
BRF1-212ENST00000547562 MAPK8IP2Q13387 824 aaPredicted RBP17.15■□□□□ 0.34
BRF1-212ENST00000547562 NUCKS1Q9H1E3 243 aaKnown RBP17.15■□□□□ 0.34
BRF1-212ENST00000547562 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.15■□□□□ 0.34
BRF1-212ENST00000547562 ABCB6Q9NP58 842 aa17.15■□□□□ 0.34
BRF1-212ENST00000547562 VAV3Q9UKW4 847 aa17.15■□□□□ 0.34
BRF1-212ENST00000547562 SSU72P8A0A1W2PR75 194 aa17.14■□□□□ 0.33
BRF1-212ENST00000547562 CYP3A4P08684 503 aa17.14■□□□□ 0.33
BRF1-212ENST00000547562 ADAM9Q13443 819 aa17.14■□□□□ 0.33
BRF1-212ENST00000547562 ASTE1Q2TB18 679 aaPredicted RBP17.14■□□□□ 0.33
BRF1-212ENST00000547562 HGSNATQ68CP4 663 aa17.14■□□□□ 0.33
BRF1-212ENST00000547562 WDR93Q6P2C0 686 aa17.14■□□□□ 0.33
BRF1-212ENST00000547562 CAPZA3Q96KX2 299 aa17.14■□□□□ 0.33
BRF1-212ENST00000547562 GBP3Q9H0R5 595 aa17.14■□□□□ 0.33
BRF1-212ENST00000547562 FAM184BQ9ULE4 1060 aa17.14■□□□□ 0.33
BRF1-212ENST00000547562 L1RE1Q9UN81 338 aa17.14■□□□□ 0.33
BRF1-212ENST00000547562 JRKLQ9Y4A0 524 aa17.14■□□□□ 0.33
BRF1-212ENST00000547562 RGPD3A6NKT7 1758 aaPredicted RBP17.14■□□□□ 0.33
BRF1-212ENST00000547562 RGPD4Q7Z3J3 1758 aa17.14■□□□□ 0.33
BRF1-212ENST00000547562 TACC1O75410 805 aa17.13■□□□□ 0.33
BRF1-212ENST00000547562 OAS2P29728 719 aaKnown RBP17.13■□□□□ 0.33
BRF1-212ENST00000547562 CASP5P51878 434 aa17.13■□□□□ 0.33
BRF1-212ENST00000547562 STAT2P52630 851 aa17.13■□□□□ 0.33
BRF1-212ENST00000547562 HDXQ7Z353 690 aa17.13■□□□□ 0.33
BRF1-212ENST00000547562 CYP2W1Q8TAV3 490 aa17.13■□□□□ 0.33
BRF1-212ENST00000547562 SYN2Q92777 582 aaPredicted RBP17.13■□□□□ 0.33
BRF1-212ENST00000547562 REEP2Q9BRK0 252 aa17.13■□□□□ 0.33
BRF1-212ENST00000547562 TMOD2Q9NZR1 351 aa17.13■□□□□ 0.33
BRF1-212ENST00000547562 CAPN6Q9Y6Q1 641 aa17.13■□□□□ 0.33
BRF1-212ENST00000547562 ECE1P42892 770 aa17.13■□□□□ 0.33
BRF1-212ENST00000547562 USP14P54578 494 aa17.13■□□□□ 0.33
BRF1-212ENST00000547562 FAM83BQ5T0W9 1011 aa17.13■□□□□ 0.33
BRF1-212ENST00000547562 LSM14BQ9BX40 385 aaKnown RBP17.13■□□□□ 0.33
BRF1-212ENST00000547562 ARHGEF10LQ9HCE6 1279 aa17.13■□□□□ 0.33
BRF1-212ENST00000547562 NLRC4Q9NPP4 1024 aa17.13■□□□□ 0.33
BRF1-212ENST00000547562 JADE2Q9NQC1 790 aa17.13■□□□□ 0.33
BRF1-212ENST00000547562 ZHX1Q9UKY1 873 aaPredicted RBP17.13■□□□□ 0.33
BRF1-212ENST00000547562 TCP10L2B9ZVM9 353 aa17.12■□□□□ 0.33
BRF1-212ENST00000547562 CETN3O15182 167 aa17.12■□□□□ 0.33
BRF1-212ENST00000547562 PJA2O43164 708 aa17.12■□□□□ 0.33
BRF1-212ENST00000547562 ZNF76P36508 570 aa17.12■□□□□ 0.33
BRF1-212ENST00000547562 GPIHBP1Q8IV16 184 aa17.12■□□□□ 0.33
BRF1-212ENST00000547562 POLR3CQ9BUI4 534 aaPredicted RBP17.12■□□□□ 0.33
BRF1-212ENST00000547562 MLXIPQ9HAP2 919 aa17.12■□□□□ 0.33
BRF1-212ENST00000547562 SPDYE2BA6NHP3 402 aa17.12■□□□□ 0.33
BRF1-212ENST00000547562 POLR3GO15318 223 aaPredicted RBP17.12■□□□□ 0.33
BRF1-212ENST00000547562 SPDYE6P0CI01 402 aa17.12■□□□□ 0.33
BRF1-212ENST00000547562 NR2F2P24468 414 aa17.12■□□□□ 0.33
BRF1-212ENST00000547562 MAGEA1P43355 309 aa17.12■□□□□ 0.33
BRF1-212ENST00000547562 SFMBT2Q5VUG0 894 aa17.12■□□□□ 0.33
BRF1-212ENST00000547562 ZNF772Q68DY9 489 aaPredicted RBP17.12■□□□□ 0.33
BRF1-212ENST00000547562 EPM2AIP1Q7L775 607 aaPredicted RBP17.12■□□□□ 0.33
BRF1-212ENST00000547562 SFR1Q86XK3 245 aa17.12■□□□□ 0.33
BRF1-212ENST00000547562 TRAF3IP3Q9Y228 551 aa17.12■□□□□ 0.33
BRF1-212ENST00000547562 IGLV3-22A0A075B6J6 115 aa17.11■□□□□ 0.33
BRF1-212ENST00000547562 ZNF185O15231 689 aa17.11■□□□□ 0.33
BRF1-212ENST00000547562 MOCS3O95396 460 aa17.11■□□□□ 0.33
BRF1-212ENST00000547562 POLR2FP61218 127 aaKnown RBP17.11■□□□□ 0.33
BRF1-212ENST00000547562 CYP4A11Q02928 519 aa17.11■□□□□ 0.33
BRF1-212ENST00000547562 GFPT1Q06210 699 aaPredicted RBP17.11■□□□□ 0.33
BRF1-212ENST00000547562 TRAF1Q13077 416 aa17.11■□□□□ 0.33
BRF1-212ENST00000547562 KNOP1Q1ED39 458 aaKnown RBP17.11■□□□□ 0.33
BRF1-212ENST00000547562 SLC9C1Q4G0N8 1177 aa17.11■□□□□ 0.33
BRF1-212ENST00000547562 TDRD12Q587J7 1177 aaKnown RBP17.11■□□□□ 0.33
BRF1-212ENST00000547562 KIAA1755Q5JYT7 1200 aa17.11■□□□□ 0.33
BRF1-212ENST00000547562 TEX2Q8IWB9 1127 aa17.11■□□□□ 0.33
BRF1-212ENST00000547562 MSL3Q8N5Y2 521 aaKnown RBP17.11■□□□□ 0.33
BRF1-212ENST00000547562 CAGE1Q8TC20 777 aa17.11■□□□□ 0.33
BRF1-212ENST00000547562 CRACR2AQ9BSW2 395 aa17.11■□□□□ 0.33
BRF1-212ENST00000547562 SNX12Q9UMY4 172 aa17.11■□□□□ 0.33
BRF1-212ENST00000547562 TMX2Q9Y320 296 aa17.11■□□□□ 0.33
BRF1-212ENST00000547562 KIF13BQ9NQT8 1826 aa17.11■□□□□ 0.33
BRF1-212ENST00000547562 RBAK-RBAKDNI3L0D1 243 aa17.11■□□□□ 0.33
BRF1-212ENST00000547562 C21orf2O43822 256 aa17.11■□□□□ 0.33
BRF1-212ENST00000547562 TLR2O60603 784 aa17.11■□□□□ 0.33
BRF1-212ENST00000547562 SERPING1P05155 500 aa17.11■□□□□ 0.33
BRF1-212ENST00000547562 TXLNBQ8N3L3 684 aa17.11■□□□□ 0.33
BRF1-212ENST00000547562 ACER1Q8TDN7 264 aa17.11■□□□□ 0.33
BRF1-212ENST00000547562 ALS2CR12Q96Q35 445 aa17.11■□□□□ 0.33
BRF1-212ENST00000547562 EIF2AK1Q9BQI3 630 aaKnown RBP17.11■□□□□ 0.33
BRF1-212ENST00000547562 BHMT2Q9H2M3 363 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms