RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 MTMR1Q13613 665 aa15.3■□□□□ 0.04
CPSF6-204ENST00000547486 PLEKHG4Q58EX7 1191 aa15.3■□□□□ 0.04
CPSF6-204ENST00000547486 TJAP1Q5JTD0 557 aa15.3■□□□□ 0.04
CPSF6-204ENST00000547486 FAM117BQ6P1L5 589 aa15.3■□□□□ 0.04
CPSF6-204ENST00000547486 LMBR1Q8WVP7 490 aa15.3■□□□□ 0.04
CPSF6-204ENST00000547486 ATXN2LQ8WWM7 1075 aaKnown RBP15.3■□□□□ 0.04
CPSF6-204ENST00000547486 SEPT1Q8WYJ6 367 aa15.3■□□□□ 0.04
CPSF6-204ENST00000547486 CDHR1Q96JP9 859 aa15.3■□□□□ 0.04
CPSF6-204ENST00000547486 ASB2Q96Q27 587 aa15.3■□□□□ 0.04
CPSF6-204ENST00000547486 RAD9AQ99638 391 aa15.3■□□□□ 0.04
CPSF6-204ENST00000547486 RIC8AQ9NPQ8 531 aa15.3■□□□□ 0.04
CPSF6-204ENST00000547486 TMEM260Q9NX78 707 aa15.3■□□□□ 0.04
CPSF6-204ENST00000547486 MYO9BQ13459 2157 aa15.29■□□□□ 0.04
CPSF6-204ENST00000547486 EMSYQ7Z589 1322 aa15.29■□□□□ 0.04
CPSF6-204ENST00000547486 LPXNO60711 386 aa15.29■□□□□ 0.04
CPSF6-204ENST00000547486 GNAT1P11488 350 aa15.29■□□□□ 0.04
CPSF6-204ENST00000547486 ADD1P35611 737 aaKnown RBP15.29■□□□□ 0.04
CPSF6-204ENST00000547486 NAPAP54920 295 aa15.29■□□□□ 0.04
CPSF6-204ENST00000547486 ARHGAP4P98171 946 aa15.29■□□□□ 0.04
CPSF6-204ENST00000547486 KRT32Q14532 448 aa15.29■□□□□ 0.04
CPSF6-204ENST00000547486 RUFY4Q6ZNE9 571 aa15.29■□□□□ 0.04
CPSF6-204ENST00000547486 MXRA8Q9BRK3 442 aa15.29■□□□□ 0.04
CPSF6-204ENST00000547486 KCNH7Q9NS40 1196 aa15.29■□□□□ 0.04
CPSF6-204ENST00000547486 THEGQ9P2T0 379 aa15.29■□□□□ 0.04
CPSF6-204ENST00000547486 ZNF215Q9UL58 517 aaPredicted RBP15.29■□□□□ 0.04
CPSF6-204ENST00000547486 XIRP2A4UGR9 3374 aa15.29■□□□□ 0.04
CPSF6-204ENST00000547486 NRCAMQ92823 1304 aa15.28■□□□□ 0.04
CPSF6-204ENST00000547486 SMCO2A6NFE2 343 aa15.28■□□□□ 0.04
CPSF6-204ENST00000547486 GOLGA8AA7E2F4 631 aa15.28■□□□□ 0.04
CPSF6-204ENST00000547486 GOLGA8BA8MQT2 603 aa15.28■□□□□ 0.04
CPSF6-204ENST00000547486 ADAMTS3O15072 1205 aa15.28■□□□□ 0.04
CPSF6-204ENST00000547486 MAFGO15525 162 aa15.28■□□□□ 0.04
CPSF6-204ENST00000547486 EFCAB14O75071 495 aa15.28■□□□□ 0.04
CPSF6-204ENST00000547486 CHRNA1P02708 482 aa15.28■□□□□ 0.04
CPSF6-204ENST00000547486 HMGB1P09429 215 aaKnown RBP15.28■□□□□ 0.04
CPSF6-204ENST00000547486 ARP10275 920 aa15.28■□□□□ 0.04
CPSF6-204ENST00000547486 MARK3P27448 753 aa15.28■□□□□ 0.04
CPSF6-204ENST00000547486 HSPA4P34932 840 aa15.28■□□□□ 0.04
CPSF6-204ENST00000547486 APOBRQ0VD83 1088 aa15.28■□□□□ 0.04
CPSF6-204ENST00000547486 GRB10Q13322 594 aa15.28■□□□□ 0.04
CPSF6-204ENST00000547486 MARCH8Q5T0T0 291 aa15.28■□□□□ 0.04
CPSF6-204ENST00000547486 Q6ZUG5 572 aa15.28■□□□□ 0.04
CPSF6-204ENST00000547486 SYMPKQ92797 1274 aaKnown RBP15.28■□□□□ 0.04
CPSF6-204ENST00000547486 CCDC136Q96JN2 1154 aa15.28■□□□□ 0.04
CPSF6-204ENST00000547486 PCYT2Q99447 389 aa15.28■□□□□ 0.04
CPSF6-204ENST00000547486 BARHL2Q9NY43 387 aa15.28■□□□□ 0.04
CPSF6-204ENST00000547486 SNX14Q9Y5W7 946 aa15.28■□□□□ 0.04
CPSF6-204ENST00000547486 CAND2O75155 1236 aa15.27■□□□□ 0.04
CPSF6-204ENST00000547486 CLK2P49760 499 aaKnown RBP15.27■□□□□ 0.04
CPSF6-204ENST00000547486 ADCY7P51828 1080 aa15.27■□□□□ 0.04
CPSF6-204ENST00000547486 MRPS5P82675 430 aaKnown RBP15.27■□□□□ 0.04
CPSF6-204ENST00000547486 FAM26DQ5JW98 314 aa15.27■□□□□ 0.04
CPSF6-204ENST00000547486 GLG1Q92896 1179 aa15.27■□□□□ 0.04
CPSF6-204ENST00000547486 ZBTB10Q96DT7 871 aa15.27■□□□□ 0.04
CPSF6-204ENST00000547486 JAKMIP1Q96N16 626 aaKnown RBP15.27■□□□□ 0.04
CPSF6-204ENST00000547486 ERAP1Q9NZ08 941 aa15.27■□□□□ 0.04
CPSF6-204ENST00000547486 MTUS1Q9ULD2 1270 aa15.27■□□□□ 0.04
CPSF6-204ENST00000547486 NAP1L2Q9ULW6 460 aaPredicted RBP15.27■□□□□ 0.04
CPSF6-204ENST00000547486 TRANK1O15050 2925 aa15.27■□□□□ 0.03
CPSF6-204ENST00000547486 PTPRSQ13332 1948 aa15.26■□□□□ 0.03
CPSF6-204ENST00000547486 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.26■□□□□ 0.03
CPSF6-204ENST00000547486 LINC01553A4QN01 128 aa15.26■□□□□ 0.03
CPSF6-204ENST00000547486 GTPBP6O43824 516 aaPredicted RBP15.26■□□□□ 0.03
CPSF6-204ENST00000547486 FOSP01100 380 aaPredicted RBP15.26■□□□□ 0.03
CPSF6-204ENST00000547486 ERVK-21P61565 698 aa15.26■□□□□ 0.03
CPSF6-204ENST00000547486 TFF2Q03403 129 aa15.26■□□□□ 0.03
CPSF6-204ENST00000547486 PPFIA1Q13136 1202 aa15.26■□□□□ 0.03
CPSF6-204ENST00000547486 ITGB3BPQ13352 177 aaPredicted RBP15.26■□□□□ 0.03
CPSF6-204ENST00000547486 GRIK4Q16099 956 aa15.26■□□□□ 0.03
CPSF6-204ENST00000547486 PPP1R18Q6NYC8 613 aa15.26■□□□□ 0.03
CPSF6-204ENST00000547486 MYOCDQ8IZQ8 938 aa15.26■□□□□ 0.03
CPSF6-204ENST00000547486 SEPT8Q92599 483 aa15.26■□□□□ 0.03
CPSF6-204ENST00000547486 BRF1Q92994 677 aa15.26■□□□□ 0.03
CPSF6-204ENST00000547486 ANO3Q9BYT9 981 aa15.26■□□□□ 0.03
CPSF6-204ENST00000547486 SMARCAD1Q9H4L7 1026 aa15.26■□□□□ 0.03
CPSF6-204ENST00000547486 EHMT1Q9H9B1 1298 aa15.26■□□□□ 0.03
CPSF6-204ENST00000547486 SUGCTQ9HAC7 445 aa15.26■□□□□ 0.03
CPSF6-204ENST00000547486 AGO4Q9HCK5 861 aaKnown RBP15.26■□□□□ 0.03
CPSF6-204ENST00000547486 JPH1Q9HDC5 661 aaPredicted RBP15.26■□□□□ 0.03
CPSF6-204ENST00000547486 SLC9A2Q9UBY0 812 aa15.26■□□□□ 0.03
CPSF6-204ENST00000547486 DOCK5Q9H7D0 1870 aa15.26■□□□□ 0.03
CPSF6-204ENST00000547486 MUC3AQ02505 3323 aa15.25■□□□□ 0.03
CPSF6-204ENST00000547486 MBLAC1A4D2B0 266 aaPredicted RBP15.25■□□□□ 0.03
CPSF6-204ENST00000547486 MEIS1O00470 390 aa15.25■□□□□ 0.03
CPSF6-204ENST00000547486 AMHP03971 560 aa15.25■□□□□ 0.03
CPSF6-204ENST00000547486 METAP2P50579 478 aaKnown RBP eCLIP15.25■□□□□ 0.03
CPSF6-204ENST00000547486 RCAN1P53805 252 aa15.25■□□□□ 0.03
CPSF6-204ENST00000547486 HTRA4P83105 476 aaPredicted RBP15.25■□□□□ 0.03
CPSF6-204ENST00000547486 FGD1P98174 961 aa15.25■□□□□ 0.03
CPSF6-204ENST00000547486 PKN1Q16512 942 aa15.25■□□□□ 0.03
CPSF6-204ENST00000547486 PFKFB3Q16875 520 aaPredicted RBP15.25■□□□□ 0.03
CPSF6-204ENST00000547486 CEP55Q53EZ4 464 aa15.25■□□□□ 0.03
CPSF6-204ENST00000547486 RPAINQ86UA6 219 aa15.25■□□□□ 0.03
CPSF6-204ENST00000547486 GDPD5Q8WTR4 605 aa15.25■□□□□ 0.03
CPSF6-204ENST00000547486 TOP1MTQ969P6 601 aa15.25■□□□□ 0.03
CPSF6-204ENST00000547486 INSL6Q9Y581 213 aa15.25■□□□□ 0.03
CPSF6-204ENST00000547486 hCG_1984214I3L0E3 225 aa15.24■□□□□ 0.03
CPSF6-204ENST00000547486 PPFIA3O75145 1194 aa15.24■□□□□ 0.03
CPSF6-204ENST00000547486 UPP2O95045 317 aa15.24■□□□□ 0.03
CPSF6-204ENST00000547486 BMP1P13497 986 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms