RNA–Protein interactions for RNA: ENST00000547102.5

LINC00661-202, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 619 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-202ENST00000547102 JAKMIP3Q5VZ66 844 aa12.21□□□□□ -0.45
LINC00661-202ENST00000547102 MCTP2Q6DN12 878 aa12.21□□□□□ -0.45
LINC00661-202ENST00000547102 TRIM22Q8IYM9 498 aa12.21□□□□□ -0.45
LINC00661-202ENST00000547102 REXO1Q8N1G1 1221 aaKnown RBP12.21□□□□□ -0.45
LINC00661-202ENST00000547102 BICD2Q8TD16 824 aa12.21□□□□□ -0.45
LINC00661-202ENST00000547102 SLC26A6Q9BXS9 759 aa12.21□□□□□ -0.45
LINC00661-202ENST00000547102 RNF26Q9BY78 433 aaPredicted RBP12.21□□□□□ -0.45
LINC00661-202ENST00000547102 AZI2Q9H6S1 392 aa12.21□□□□□ -0.45
LINC00661-202ENST00000547102 KCNH7Q9NS40 1196 aa12.21□□□□□ -0.45
LINC00661-202ENST00000547102 ERAP1Q9NZ08 941 aa12.21□□□□□ -0.45
LINC00661-202ENST00000547102 SLC9A2Q9UBY0 812 aa12.21□□□□□ -0.45
LINC00661-202ENST00000547102 YBX2Q9Y2T7 364 aaKnown RBP12.21□□□□□ -0.45
LINC00661-202ENST00000547102 KAT6AQ92794 2004 aa12.21□□□□□ -0.46
LINC00661-202ENST00000547102 TET1Q8NFU7 2136 aa12.2□□□□□ -0.46
LINC00661-202ENST00000547102 NFASCO94856 1347 aa12.2□□□□□ -0.46
LINC00661-202ENST00000547102 NRCAMQ92823 1304 aa12.2□□□□□ -0.46
LINC00661-202ENST00000547102 ABHD14A-ACY1A0A1B0GW23 586 aa12.2□□□□□ -0.46
LINC00661-202ENST00000547102 CPLX1O14810 134 aa12.2□□□□□ -0.46
LINC00661-202ENST00000547102 TREHO43280 583 aa12.2□□□□□ -0.46
LINC00661-202ENST00000547102 NBNO60934 754 aa12.2□□□□□ -0.46
LINC00661-202ENST00000547102 CXCL10P02778 98 aa12.2□□□□□ -0.46
LINC00661-202ENST00000547102 MARK3P27448 753 aa12.2□□□□□ -0.46
LINC00661-202ENST00000547102 HOXC8P31273 242 aa12.2□□□□□ -0.46
LINC00661-202ENST00000547102 CCT2P78371 535 aaKnown RBP12.2□□□□□ -0.46
LINC00661-202ENST00000547102 TRIM71Q2Q1W2 868 aaKnown RBP12.2□□□□□ -0.46
LINC00661-202ENST00000547102 CPLX2Q6PUV4 134 aaKnown RBP12.2□□□□□ -0.46
LINC00661-202ENST00000547102 HERC6Q8IVU3 1022 aa12.2□□□□□ -0.46
LINC00661-202ENST00000547102 LMBR1Q8WVP7 490 aa12.2□□□□□ -0.46
LINC00661-202ENST00000547102 WNT8BQ93098 351 aa12.2□□□□□ -0.46
LINC00661-202ENST00000547102 PHKBQ93100 1093 aa12.2□□□□□ -0.46
LINC00661-202ENST00000547102 RNPEPQ9H4A4 650 aa12.2□□□□□ -0.46
LINC00661-202ENST00000547102 SMARCAD1Q9H4L7 1026 aa12.2□□□□□ -0.46
LINC00661-202ENST00000547102 PRDM12Q9H4Q4 367 aa12.2□□□□□ -0.46
LINC00661-202ENST00000547102 ZSWIM6Q9HCJ5 1215 aa12.2□□□□□ -0.46
LINC00661-202ENST00000547102 SETD4Q9NVD3 440 aa12.2□□□□□ -0.46
LINC00661-202ENST00000547102 TMEM260Q9NX78 707 aa12.2□□□□□ -0.46
LINC00661-202ENST00000547102 MYO9BQ13459 2157 aa12.19□□□□□ -0.46
LINC00661-202ENST00000547102 EIF5BO60841 1220 aaKnown RBP12.19□□□□□ -0.46
LINC00661-202ENST00000547102 LGR5O75473 907 aa12.19□□□□□ -0.46
LINC00661-202ENST00000547102 CTSHP09668 335 aa12.19□□□□□ -0.46
LINC00661-202ENST00000547102 IFNAR1P17181 557 aa12.19□□□□□ -0.46
LINC00661-202ENST00000547102 PDIA3P30101 505 aaKnown RBP12.19□□□□□ -0.46
LINC00661-202ENST00000547102 CLK2P49760 499 aaKnown RBP12.19□□□□□ -0.46
LINC00661-202ENST00000547102 EVCP57679 992 aa12.19□□□□□ -0.46
LINC00661-202ENST00000547102 WDR5P61964 334 aaKnown RBP12.19□□□□□ -0.46
LINC00661-202ENST00000547102 PPFIA1Q13136 1202 aa12.19□□□□□ -0.46
LINC00661-202ENST00000547102 IKBKEQ14164 716 aa12.19□□□□□ -0.46
LINC00661-202ENST00000547102 HIC1Q14526 733 aa12.19□□□□□ -0.46
LINC00661-202ENST00000547102 TAF2Q6P1X5 1199 aa12.19□□□□□ -0.46
LINC00661-202ENST00000547102 NIPA1Q7RTP0 329 aa12.19□□□□□ -0.46
LINC00661-202ENST00000547102 RSPH3Q86UC2 560 aa12.19□□□□□ -0.46
LINC00661-202ENST00000547102 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.19□□□□□ -0.46
LINC00661-202ENST00000547102 CYP2W1Q8TAV3 490 aa12.19□□□□□ -0.46
LINC00661-202ENST00000547102 TNPO1Q92973 898 aaKnown RBP12.19□□□□□ -0.46
LINC00661-202ENST00000547102 ZBED2Q9BTP6 218 aa12.19□□□□□ -0.46
LINC00661-202ENST00000547102 UPF3BQ9BZI7 483 aaKnown RBP12.19□□□□□ -0.46
LINC00661-202ENST00000547102 TM6SF1Q9BZW5 370 aa12.19□□□□□ -0.46
LINC00661-202ENST00000547102 ZMYND12Q9H0C1 365 aa12.19□□□□□ -0.46
LINC00661-202ENST00000547102 NCOA5Q9HCD5 579 aaKnown RBP12.19□□□□□ -0.46
LINC00661-202ENST00000547102 PDRG1Q9NUG6 133 aa12.19□□□□□ -0.46
LINC00661-202ENST00000547102 TCEAL9Q9UHQ7 104 aa12.19□□□□□ -0.46
LINC00661-202ENST00000547102 TELO2Q9Y4R8 837 aa12.19□□□□□ -0.46
LINC00661-202ENST00000547102 COL6A3P12111 3177 aa12.18□□□□□ -0.46
LINC00661-202ENST00000547102 GSTTP1A0A1W2PQM5 241 aa12.18□□□□□ -0.46
LINC00661-202ENST00000547102 MEIS1O00470 390 aa12.18□□□□□ -0.46
LINC00661-202ENST00000547102 TLL1O43897 1013 aa12.18□□□□□ -0.46
LINC00661-202ENST00000547102 CA3P07451 260 aa12.18□□□□□ -0.46
LINC00661-202ENST00000547102 MYOGP15173 224 aa12.18□□□□□ -0.46
LINC00661-202ENST00000547102 IGFBP4P22692 258 aa12.18□□□□□ -0.46
LINC00661-202ENST00000547102 ACTR2P61160 394 aa12.18□□□□□ -0.46
LINC00661-202ENST00000547102 SETQ01105 290 aaPredicted RBP12.18□□□□□ -0.46
LINC00661-202ENST00000547102 SSRP1Q08945 709 aaKnown RBP12.18□□□□□ -0.46
LINC00661-202ENST00000547102 GRIK4Q16099 956 aa12.18□□□□□ -0.46
LINC00661-202ENST00000547102 PKN1Q16512 942 aa12.18□□□□□ -0.46
LINC00661-202ENST00000547102 TRAF7Q6Q0C0 670 aa12.18□□□□□ -0.46
LINC00661-202ENST00000547102 PLA2G4DQ86XP0 818 aa12.18□□□□□ -0.46
LINC00661-202ENST00000547102 SEPT8Q92599 483 aa12.18□□□□□ -0.46
LINC00661-202ENST00000547102 AGO4Q9HCK5 861 aaKnown RBP12.18□□□□□ -0.46
LINC00661-202ENST00000547102 TUBE1Q9UJT0 475 aa12.18□□□□□ -0.46
LINC00661-202ENST00000547102 TRPC6Q9Y210 931 aa12.18□□□□□ -0.46
LINC00661-202ENST00000547102 DDX39AO00148 427 aaKnown RBP12.17□□□□□ -0.46
LINC00661-202ENST00000547102 PPFIA3O75145 1194 aa12.17□□□□□ -0.46
LINC00661-202ENST00000547102 AMHP03971 560 aa12.17□□□□□ -0.46
LINC00661-202ENST00000547102 RPLP2P05387 115 aaKnown RBP12.17□□□□□ -0.46
LINC00661-202ENST00000547102 CYP3A4P08684 503 aa12.17□□□□□ -0.46
LINC00661-202ENST00000547102 ARP10275 920 aa12.17□□□□□ -0.46
LINC00661-202ENST00000547102 IGBP1P78318 339 aa12.17□□□□□ -0.46
LINC00661-202ENST00000547102 ITGB3BPQ13352 177 aaPredicted RBP12.17□□□□□ -0.46
LINC00661-202ENST00000547102 TOB2Q14106 344 aaPredicted RBP12.17□□□□□ -0.46
LINC00661-202ENST00000547102 MBTPS1Q14703 1052 aa12.17□□□□□ -0.46
LINC00661-202ENST00000547102 GPNMBQ14956 572 aa12.17□□□□□ -0.46
LINC00661-202ENST00000547102 NTRK3Q16288 839 aa12.17□□□□□ -0.46
LINC00661-202ENST00000547102 FAM160B1Q5W0V3 765 aa12.17□□□□□ -0.46
LINC00661-202ENST00000547102 ZNF274Q96GC6 653 aaPredicted RBP12.17□□□□□ -0.46
LINC00661-202ENST00000547102 SH3GLB2Q9NR46 395 aa12.17□□□□□ -0.46
LINC00661-202ENST00000547102 VPS54Q9P1Q0 977 aa12.17□□□□□ -0.46
LINC00661-202ENST00000547102 CDH23Q9H251 3354 aa12.16□□□□□ -0.46
LINC00661-202ENST00000547102 RRN3P2A6NIE6 340 aa12.16□□□□□ -0.46
LINC00661-202ENST00000547102 FAM86B1E9PN63 330 aa12.16□□□□□ -0.46
LINC00661-202ENST00000547102 BACH1O14867 736 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms