RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 DDX42Q86XP3 938 aaKnown RBP eCLIP8.42□□□□□ -1.06
NPAS3-204ENST00000546849 WDR66Q8TBY9 1149 aa8.42□□□□□ -1.06
NPAS3-204ENST00000546849 LIN37Q96GY3 246 aaPredicted RBP8.42□□□□□ -1.06
NPAS3-204ENST00000546849 DCP1AQ9NPI6 582 aaPredicted RBP8.42□□□□□ -1.06
NPAS3-204ENST00000546849 KLHL14Q9P2G3 628 aa8.42□□□□□ -1.06
NPAS3-204ENST00000546849 ZEB2O60315 1214 aa8.41□□□□□ -1.06
NPAS3-204ENST00000546849 FKBP9O95302 570 aa8.41□□□□□ -1.06
NPAS3-204ENST00000546849 CDK11BP21127 795 aaKnown RBP8.41□□□□□ -1.06
NPAS3-204ENST00000546849 LSSP48449 732 aa8.41□□□□□ -1.06
NPAS3-204ENST00000546849 MECP2P51608 486 aaKnown RBP8.41□□□□□ -1.06
NPAS3-204ENST00000546849 KIF11P52732 1056 aa8.41□□□□□ -1.06
NPAS3-204ENST00000546849 SRSF3P84103 164 aaKnown RBP8.41□□□□□ -1.06
NPAS3-204ENST00000546849 DSG1Q02413 1049 aa8.41□□□□□ -1.06
NPAS3-204ENST00000546849 TMEM132BQ14DG7 1078 aa8.41□□□□□ -1.06
NPAS3-204ENST00000546849 ATP13A4Q4VNC1 1196 aa8.41□□□□□ -1.06
NPAS3-204ENST00000546849 CPZQ66K79 652 aa8.41□□□□□ -1.06
NPAS3-204ENST00000546849 FKBP9P1Q75LS8 142 aa8.41□□□□□ -1.06
NPAS3-204ENST00000546849 ZC3H18Q86VM9 953 aaKnown RBP8.41□□□□□ -1.06
NPAS3-204ENST00000546849 RBM12BQ8IXT5 1001 aaKnown RBP8.41□□□□□ -1.06
NPAS3-204ENST00000546849 CHTF18Q8WVB6 975 aa8.41□□□□□ -1.06
NPAS3-204ENST00000546849 SCYL1Q96KG9 808 aa8.41□□□□□ -1.06
NPAS3-204ENST00000546849 TCRBV5S2A0A599 114 aa8.4□□□□□ -1.06
NPAS3-204ENST00000546849 TCRBV5S4A2TA0A5A2 114 aa8.4□□□□□ -1.06
NPAS3-204ENST00000546849 HRKO00198 91 aa8.4□□□□□ -1.06
NPAS3-204ENST00000546849 CLASP2O75122 1294 aaKnown RBP8.4□□□□□ -1.06
NPAS3-204ENST00000546849 PTPN1P18031 435 aaKnown RBP8.4□□□□□ -1.06
NPAS3-204ENST00000546849 ITGB5P18084 799 aa8.4□□□□□ -1.06
NPAS3-204ENST00000546849 TMPRSS15P98073 1019 aa8.4□□□□□ -1.06
NPAS3-204ENST00000546849 ZNF200P98182 395 aaPredicted RBP8.4□□□□□ -1.06
NPAS3-204ENST00000546849 ETV3LQ6ZN32 361 aa8.4□□□□□ -1.06
NPAS3-204ENST00000546849 OTOP1Q7RTM1 612 aa8.4□□□□□ -1.06
NPAS3-204ENST00000546849 PRPF38AQ8NAV1 312 aaKnown RBP8.4□□□□□ -1.06
NPAS3-204ENST00000546849 SMC1BQ8NDV3 1235 aa8.4□□□□□ -1.06
NPAS3-204ENST00000546849 SH3RF2Q8TEC5 729 aa8.4□□□□□ -1.06
NPAS3-204ENST00000546849 KCNH7Q9NS40 1196 aa8.4□□□□□ -1.06
NPAS3-204ENST00000546849 OXSMQ9NWU1 459 aa8.4□□□□□ -1.06
NPAS3-204ENST00000546849 HCFC2Q9Y5Z7 792 aa8.4□□□□□ -1.06
NPAS3-204ENST00000546849 ALG1L2C9J202 215 aa8.39□□□□□ -1.07
NPAS3-204ENST00000546849 LTFP02788 710 aa8.39□□□□□ -1.07
NPAS3-204ENST00000546849 ATP2A2P16615 1042 aaKnown RBP8.39□□□□□ -1.07
NPAS3-204ENST00000546849 VIPR1P32241 457 aa8.39□□□□□ -1.07
NPAS3-204ENST00000546849 ADCYAP1R1P41586 468 aa8.39□□□□□ -1.07
NPAS3-204ENST00000546849 YBX1P67809 324 aaKnown RBP8.39□□□□□ -1.07
NPAS3-204ENST00000546849 FAM50AQ14320 339 aaKnown RBP8.39□□□□□ -1.07
NPAS3-204ENST00000546849 STAT4Q14765 748 aa8.39□□□□□ -1.07
NPAS3-204ENST00000546849 MLANAQ16655 118 aa8.39□□□□□ -1.07
NPAS3-204ENST00000546849 RNF219Q5W0B1 726 aaPredicted RBP8.39□□□□□ -1.07
NPAS3-204ENST00000546849 IQSEC1Q6DN90 963 aa8.39□□□□□ -1.07
NPAS3-204ENST00000546849 HDGFL2Q7Z4V5 671 aaPredicted RBP8.39□□□□□ -1.07
NPAS3-204ENST00000546849 AMIGO3Q86WK7 504 aa8.39□□□□□ -1.07
NPAS3-204ENST00000546849 SPATS2Q86XZ4 545 aaKnown RBP8.39□□□□□ -1.07
NPAS3-204ENST00000546849 EFHBQ8N7U6 833 aa8.39□□□□□ -1.07
NPAS3-204ENST00000546849 KIAA1958Q8N8K9 716 aa8.39□□□□□ -1.07
NPAS3-204ENST00000546849 ARRDC4Q8NCT1 418 aa8.39□□□□□ -1.07
NPAS3-204ENST00000546849 TOE1Q96GM8 510 aaKnown RBP8.39□□□□□ -1.07
NPAS3-204ENST00000546849 CEP89Q96ST8 783 aa8.39□□□□□ -1.07
NPAS3-204ENST00000546849 BCAS3Q9H6U6 928 aa8.39□□□□□ -1.07
NPAS3-204ENST00000546849 ZNF552Q9H707 407 aaPredicted RBP8.39□□□□□ -1.07
NPAS3-204ENST00000546849 NGRNQ9NPE2 291 aaKnown RBP8.39□□□□□ -1.07
NPAS3-204ENST00000546849 TOMM22Q9NS69 142 aa8.39□□□□□ -1.07
NPAS3-204ENST00000546849 HOMER2Q9NSB8 354 aa8.39□□□□□ -1.07
NPAS3-204ENST00000546849 FAN1Q9Y2M0 1017 aa8.39□□□□□ -1.07
NPAS3-204ENST00000546849 LRRC10BA6NIK2 292 aa8.38□□□□□ -1.07
NPAS3-204ENST00000546849 NEMP1O14524 444 aa8.38□□□□□ -1.07
NPAS3-204ENST00000546849 RAB11FIP3O75154 756 aa8.38□□□□□ -1.07
NPAS3-204ENST00000546849 ULK1O75385 1050 aa8.38□□□□□ -1.07
NPAS3-204ENST00000546849 BPIP17213 487 aa8.38□□□□□ -1.07
NPAS3-204ENST00000546849 PAN2Q504Q3 1202 aaKnown RBP8.38□□□□□ -1.07
NPAS3-204ENST00000546849 NOSTRINQ8IVI9 506 aa8.38□□□□□ -1.07
NPAS3-204ENST00000546849 TTLL11Q8NHH1 800 aa8.38□□□□□ -1.07
NPAS3-204ENST00000546849 FAM126AQ9BYI3 521 aaPredicted RBP8.38□□□□□ -1.07
NPAS3-204ENST00000546849 ACSS2Q9NR19 701 aa8.38□□□□□ -1.07
NPAS3-204ENST00000546849 DTLQ9NZJ0 730 aa8.38□□□□□ -1.07
NPAS3-204ENST00000546849 BUB1BO60566 1050 aaPredicted RBP8.37□□□□□ -1.07
NPAS3-204ENST00000546849 PFKLP17858 780 aa8.37□□□□□ -1.07
NPAS3-204ENST00000546849 PMLP29590 882 aa8.37□□□□□ -1.07
NPAS3-204ENST00000546849 EPHA5P54756 1037 aa8.37□□□□□ -1.07
NPAS3-204ENST00000546849 NKX3-2P78367 333 aa8.37□□□□□ -1.07
NPAS3-204ENST00000546849 TARBP2Q15633 366 aaKnown RBP8.37□□□□□ -1.07
NPAS3-204ENST00000546849 FAM126BQ8IXS8 530 aa8.37□□□□□ -1.07
NPAS3-204ENST00000546849 ARHGAP28Q9P2N2 729 aa8.37□□□□□ -1.07
NPAS3-204ENST00000546849 ZNF503-AS2A6NEH8 195 aa8.36□□□□□ -1.07
NPAS3-204ENST00000546849 GPR39O43194 453 aa8.36□□□□□ -1.07
NPAS3-204ENST00000546849 SLC9A1P19634 815 aa8.36□□□□□ -1.07
NPAS3-204ENST00000546849 CDKN1CP49918 316 aaPredicted RBP8.36□□□□□ -1.07
NPAS3-204ENST00000546849 DDB1Q16531 1140 aa8.36□□□□□ -1.07
NPAS3-204ENST00000546849 CD300LDQ6UXZ3 194 aa8.36□□□□□ -1.07
NPAS3-204ENST00000546849 PRR23BQ6ZRT6 265 aa8.36□□□□□ -1.07
NPAS3-204ENST00000546849 FERMT3Q86UX7 667 aa8.36□□□□□ -1.07
NPAS3-204ENST00000546849 HIPK4Q8NE63 616 aa8.36□□□□□ -1.07
NPAS3-204ENST00000546849 CLEC4DQ8WXI8 215 aa8.36□□□□□ -1.07
NPAS3-204ENST00000546849 EMC7Q9NPA0 242 aa8.36□□□□□ -1.07
NPAS3-204ENST00000546849 SPTLC3Q9NUV7 552 aa8.36□□□□□ -1.07
NPAS3-204ENST00000546849 H2AFY2Q9P0M6 372 aaPredicted RBP8.36□□□□□ -1.07
NPAS3-204ENST00000546849 SPO11Q9Y5K1 396 aa8.36□□□□□ -1.07
NPAS3-204ENST00000546849 B3GALT1Q9Y5Z6 326 aa8.36□□□□□ -1.07
NPAS3-204ENST00000546849 FOXP2O15409 715 aa8.35□□□□□ -1.07
NPAS3-204ENST00000546849 CYP17A1P05093 508 aa8.35□□□□□ -1.07
NPAS3-204ENST00000546849 NCAM1P13591 858 aa8.35□□□□□ -1.07
NPAS3-204ENST00000546849 STAT5AP42229 794 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms