RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 TBX10O75333 385 aa14.83□□□□□ -0.04
SCAF11-208ENST00000546534 LGALS2P05162 132 aa14.83□□□□□ -0.04
SCAF11-208ENST00000546534 TGFB3P10600 412 aa14.83□□□□□ -0.04
SCAF11-208ENST00000546534 GHRHRQ02643 423 aa14.83□□□□□ -0.04
SCAF11-208ENST00000546534 NMIQ13287 307 aaPredicted RBP14.83□□□□□ -0.04
SCAF11-208ENST00000546534 PGM5Q15124 567 aa14.83□□□□□ -0.04
SCAF11-208ENST00000546534 STOX1Q6ZVD7 989 aa14.83□□□□□ -0.04
SCAF11-208ENST00000546534 BMP8AQ7Z5Y6 402 aa14.83□□□□□ -0.04
SCAF11-208ENST00000546534 APBB2Q92870 758 aa14.83□□□□□ -0.04
SCAF11-208ENST00000546534 MLXIPQ9HAP2 919 aa14.83□□□□□ -0.04
SCAF11-208ENST00000546534 SETD4Q9NVD3 440 aa14.83□□□□□ -0.04
SCAF11-208ENST00000546534 TECTAO75443 2155 aa14.83□□□□□ -0.04
SCAF11-208ENST00000546534 MYH7BA7E2Y1 1941 aa14.82□□□□□ -0.04
SCAF11-208ENST00000546534 KDM4AO75164 1064 aa14.82□□□□□ -0.04
SCAF11-208ENST00000546534 CSPG5O95196 566 aa14.82□□□□□ -0.04
SCAF11-208ENST00000546534 PARP1P09874 1014 aaKnown RBP14.82□□□□□ -0.04
SCAF11-208ENST00000546534 HOXA13P31271 388 aaPredicted RBP14.82□□□□□ -0.04
SCAF11-208ENST00000546534 PTPN5P54829 565 aa14.82□□□□□ -0.04
SCAF11-208ENST00000546534 ADAM15Q13444 863 aa14.82□□□□□ -0.04
SCAF11-208ENST00000546534 CCDC178Q5BJE1 867 aa14.82□□□□□ -0.04
SCAF11-208ENST00000546534 FAM26DQ5JW98 314 aa14.82□□□□□ -0.04
SCAF11-208ENST00000546534 IQCA1Q86XH1 822 aa14.82□□□□□ -0.04
SCAF11-208ENST00000546534 PBXIP1Q96AQ6 731 aa14.82□□□□□ -0.04
SCAF11-208ENST00000546534 AMNQ9BXJ7 453 aa14.82□□□□□ -0.04
SCAF11-208ENST00000546534 CD207Q9UJ71 328 aa14.82□□□□□ -0.04
SCAF11-208ENST00000546534 CCDC171Q6TFL3 1326 aa14.82□□□□□ -0.04
SCAF11-208ENST00000546534 WDFY4Q6ZS81 3184 aa14.82□□□□□ -0.04
SCAF11-208ENST00000546534 NLRC5Q86WI3 1866 aa14.82□□□□□ -0.04
SCAF11-208ENST00000546534 TMEM221A6NGB7 291 aa14.81□□□□□ -0.04
SCAF11-208ENST00000546534 M0R296 226 aa14.81□□□□□ -0.04
SCAF11-208ENST00000546534 PPP1R11O60927 126 aaPredicted RBP14.81□□□□□ -0.04
SCAF11-208ENST00000546534 CCND2P30279 289 aa14.81□□□□□ -0.04
SCAF11-208ENST00000546534 TRIM67Q6ZTA4 783 aa14.81□□□□□ -0.04
SCAF11-208ENST00000546534 ENAHQ8N8S7 591 aaPredicted RBP14.81□□□□□ -0.04
SCAF11-208ENST00000546534 CLP1Q92989 425 aaKnown RBP14.81□□□□□ -0.04
SCAF11-208ENST00000546534 ZSCAN10Q96SZ4 725 aaPredicted RBP14.81□□□□□ -0.04
SCAF11-208ENST00000546534 USP26Q9BXU7 913 aa14.81□□□□□ -0.04
SCAF11-208ENST00000546534 RC3H2Q9HBD1 1191 aaKnown RBP14.81□□□□□ -0.04
SCAF11-208ENST00000546534 ALG13Q9NP73 1137 aaKnown RBP14.81□□□□□ -0.04
SCAF11-208ENST00000546534 MAP3K20Q9NYL2 800 aaKnown RBP14.81□□□□□ -0.04
SCAF11-208ENST00000546534 RWDD3Q9Y3V2 267 aa14.81□□□□□ -0.04
SCAF11-208ENST00000546534 ADGRA3Q8IWK6 1321 aa14.81□□□□□ -0.04
SCAF11-208ENST00000546534 RALGAPA2Q2PPJ7 1873 aa14.8□□□□□ -0.04
SCAF11-208ENST00000546534 ZNF213O14771 459 aa14.8□□□□□ -0.04
SCAF11-208ENST00000546534 ST18O60284 1047 aa14.8□□□□□ -0.04
SCAF11-208ENST00000546534 MMP1P03956 469 aa14.8□□□□□ -0.04
SCAF11-208ENST00000546534 GNAT1P11488 350 aa14.8□□□□□ -0.04
SCAF11-208ENST00000546534 PDE1AP54750 535 aa14.8□□□□□ -0.04
SCAF11-208ENST00000546534 ADAM17P78536 824 aa14.8□□□□□ -0.04
SCAF11-208ENST00000546534 TCF15Q12870 199 aa14.8□□□□□ -0.04
SCAF11-208ENST00000546534 CAMK1Q14012 370 aa14.8□□□□□ -0.04
SCAF11-208ENST00000546534 TRIM50Q86XT4 487 aa14.8□□□□□ -0.04
SCAF11-208ENST00000546534 STAG2Q8N3U4 1231 aa14.8□□□□□ -0.04
SCAF11-208ENST00000546534 SLC39A7Q92504 469 aa14.8□□□□□ -0.04
SCAF11-208ENST00000546534 MSLNLQ96KJ4 702 aa14.8□□□□□ -0.04
SCAF11-208ENST00000546534 SUPT16HQ9Y5B9 1047 aaKnown RBP14.8□□□□□ -0.04
SCAF11-208ENST00000546534 PCDHA1Q9Y5I3 950 aa14.8□□□□□ -0.04
SCAF11-208ENST00000546534 ATG2AQ2TAZ0 1938 aa14.8□□□□□ -0.04
SCAF11-208ENST00000546534 TRIM6-TRIM34B2RNG4 842 aa14.79□□□□□ -0.04
SCAF11-208ENST00000546534 B4E1Z4 1266 aa14.79□□□□□ -0.04
SCAF11-208ENST00000546534 NOP56O00567 594 aaKnown RBP14.79□□□□□ -0.04
SCAF11-208ENST00000546534 ENPP3O14638 875 aa14.79□□□□□ -0.04
SCAF11-208ENST00000546534 EYA4O95677 639 aa14.79□□□□□ -0.04
SCAF11-208ENST00000546534 CHRNA1P02708 482 aa14.79□□□□□ -0.04
SCAF11-208ENST00000546534 GHRP10912 638 aa14.79□□□□□ -0.04
SCAF11-208ENST00000546534 NDUFV1P49821 464 aa14.79□□□□□ -0.04
SCAF11-208ENST00000546534 ARHGAP4P98171 946 aa14.79□□□□□ -0.04
SCAF11-208ENST00000546534 BTG3Q14201 252 aaPredicted RBP14.79□□□□□ -0.04
SCAF11-208ENST00000546534 ANKRD45Q5TZF3 282 aa14.79□□□□□ -0.04
SCAF11-208ENST00000546534 LMBR1Q8WVP7 490 aa14.79□□□□□ -0.04
SCAF11-208ENST00000546534 ZNF689Q96CS4 500 aaPredicted RBP14.79□□□□□ -0.04
SCAF11-208ENST00000546534 OCEL1Q9H607 264 aa14.79□□□□□ -0.04
SCAF11-208ENST00000546534 EHMT1Q9H9B1 1298 aa14.79□□□□□ -0.04
SCAF11-208ENST00000546534 TELO2Q9Y4R8 837 aa14.79□□□□□ -0.04
SCAF11-208ENST00000546534 KLRF2D3W0D1 207 aa14.78□□□□□ -0.04
SCAF11-208ENST00000546534 ZBTB5O15062 677 aa14.78□□□□□ -0.04
SCAF11-208ENST00000546534 C7P10643 843 aa14.78□□□□□ -0.04
SCAF11-208ENST00000546534 DNAJB1P25685 340 aa14.78□□□□□ -0.04
SCAF11-208ENST00000546534 ZXDAP98168 799 aa14.78□□□□□ -0.04
SCAF11-208ENST00000546534 CYFIP1Q7L576 1253 aa14.78□□□□□ -0.04
SCAF11-208ENST00000546534 ADGRD2Q7Z7M1 963 aa14.78□□□□□ -0.04
SCAF11-208ENST00000546534 FCHSD1Q86WN1 690 aa14.78□□□□□ -0.04
SCAF11-208ENST00000546534 TICAM2Q86XR7 235 aa14.78□□□□□ -0.04
SCAF11-208ENST00000546534 SUGP1Q8IWZ8 645 aaKnown RBP14.78□□□□□ -0.04
SCAF11-208ENST00000546534 SAMD3Q8N6K7 520 aa14.78□□□□□ -0.04
SCAF11-208ENST00000546534 MTMR8Q96EF0 704 aa14.78□□□□□ -0.04
SCAF11-208ENST00000546534 GPR20Q99678 358 aa14.78□□□□□ -0.04
SCAF11-208ENST00000546534 PRRX2Q99811 253 aa14.78□□□□□ -0.04
SCAF11-208ENST00000546534 TSHZ2Q9NRE2 1034 aa14.78□□□□□ -0.04
SCAF11-208ENST00000546534 CLEC1BQ9P126 229 aa14.78□□□□□ -0.04
SCAF11-208ENST00000546534 ZSWIM5Q9P217 1185 aa14.78□□□□□ -0.04
SCAF11-208ENST00000546534 PLAGL2Q9UPG8 496 aa14.78□□□□□ -0.04
SCAF11-208ENST00000546534 LOC730098B7Z3J9 87 aa14.77□□□□□ -0.05
SCAF11-208ENST00000546534 GCOM1H8Y6P7 765 aaPredicted RBP14.77□□□□□ -0.05
SCAF11-208ENST00000546534 DGKIO75912 1065 aa14.77□□□□□ -0.05
SCAF11-208ENST00000546534 POLR2MP0CAP2 368 aa14.77□□□□□ -0.05
SCAF11-208ENST00000546534 NT5C2P49902 561 aa14.77□□□□□ -0.05
SCAF11-208ENST00000546534 RRP1P56182 461 aaKnown RBP14.77□□□□□ -0.05
SCAF11-208ENST00000546534 SEMA3FQ13275 785 aa14.77□□□□□ -0.05
SCAF11-208ENST00000546534 NEDD9Q14511 834 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms