RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 POTEGQ6S5H5 508 aa15.42■□□□□ 0.06
SCARB1-209ENST00000545305 CATSPER3Q86XQ3 398 aa15.42■□□□□ 0.06
SCARB1-209ENST00000545305 FBXO16Q8IX29 292 aaPredicted RBP15.42■□□□□ 0.06
SCARB1-209ENST00000545305 SMAP1Q8IYB5 467 aaPredicted RBP15.42■□□□□ 0.06
SCARB1-209ENST00000545305 MSL3Q8N5Y2 521 aaKnown RBP15.42■□□□□ 0.06
SCARB1-209ENST00000545305 ERCC4Q92889 916 aaPredicted RBP15.42■□□□□ 0.06
SCARB1-209ENST00000545305 CCDC47Q96A33 483 aaKnown RBP15.42■□□□□ 0.06
SCARB1-209ENST00000545305 DYDC2Q96IM9 177 aa15.42■□□□□ 0.06
SCARB1-209ENST00000545305 MAML3Q96JK9 1138 aa15.42■□□□□ 0.06
SCARB1-209ENST00000545305 SENP7Q9BQF6 1050 aa15.42■□□□□ 0.06
SCARB1-209ENST00000545305 VTA1Q9NP79 307 aa15.42■□□□□ 0.06
SCARB1-209ENST00000545305 ANO10Q9NW15 660 aa15.42■□□□□ 0.06
SCARB1-209ENST00000545305 SLC9A2Q9UBY0 812 aa15.42■□□□□ 0.06
SCARB1-209ENST00000545305 TUBE1Q9UJT0 475 aa15.42■□□□□ 0.06
SCARB1-209ENST00000545305 DNM3Q9UQ16 869 aa15.42■□□□□ 0.06
SCARB1-209ENST00000545305 GOLGA6L3A6NEY3 463 aa15.41■□□□□ 0.06
SCARB1-209ENST00000545305 ECM2O94769 699 aaPredicted RBP15.41■□□□□ 0.06
SCARB1-209ENST00000545305 SPATA31C1P0DKV0 1188 aa15.41■□□□□ 0.06
SCARB1-209ENST00000545305 RGS2P41220 211 aa15.41■□□□□ 0.06
SCARB1-209ENST00000545305 VEGFBP49765 207 aa15.41■□□□□ 0.06
SCARB1-209ENST00000545305 DPYDQ12882 1025 aa15.41■□□□□ 0.06
SCARB1-209ENST00000545305 CTTNQ14247 550 aaKnown RBP15.41■□□□□ 0.06
SCARB1-209ENST00000545305 MCM6Q14566 821 aa15.41■□□□□ 0.06
SCARB1-209ENST00000545305 KIF22Q14807 665 aa15.41■□□□□ 0.06
SCARB1-209ENST00000545305 TPH2Q8IWU9 490 aa15.41■□□□□ 0.06
SCARB1-209ENST00000545305 STAMQ92783 540 aa15.41■□□□□ 0.06
SCARB1-209ENST00000545305 FUCA2Q9BTY2 467 aa15.41■□□□□ 0.06
SCARB1-209ENST00000545305 BLOC1S4Q9NUP1 217 aa15.41■□□□□ 0.06
SCARB1-209ENST00000545305 KBTBD4Q9NVX7 518 aa15.41■□□□□ 0.06
SCARB1-209ENST00000545305 PCDHA5Q9Y5H7 936 aa15.41■□□□□ 0.06
SCARB1-209ENST00000545305 SYNGAP1Q96PV0 1343 aa15.41■□□□□ 0.06
SCARB1-209ENST00000545305 THSD7BQ9C0I4 1608 aa15.4■□□□□ 0.06
SCARB1-209ENST00000545305 BIN1O00499 593 aa15.4■□□□□ 0.06
SCARB1-209ENST00000545305 SSBP05455 408 aaKnown RBP eCLIP15.4■□□□□ 0.06
SCARB1-209ENST00000545305 P4HBP07237 508 aaKnown RBP15.4■□□□□ 0.06
SCARB1-209ENST00000545305 PSAPP07602 524 aa15.4■□□□□ 0.06
SCARB1-209ENST00000545305 UBA1P22314 1058 aaKnown RBP15.4■□□□□ 0.06
SCARB1-209ENST00000545305 DHX8Q14562 1220 aaKnown RBP15.4■□□□□ 0.06
SCARB1-209ENST00000545305 TTLL4Q14679 1199 aa15.4■□□□□ 0.06
SCARB1-209ENST00000545305 ECM1Q16610 540 aa15.4■□□□□ 0.06
SCARB1-209ENST00000545305 MAMDC4Q6UXC1 1216 aa15.4■□□□□ 0.06
SCARB1-209ENST00000545305 TRIML1Q8N9V2 468 aa15.4■□□□□ 0.06
SCARB1-209ENST00000545305 LRRC15Q8TF66 581 aa15.4■□□□□ 0.06
SCARB1-209ENST00000545305 SCFD2Q8WU76 684 aa15.4■□□□□ 0.06
SCARB1-209ENST00000545305 GSDMAQ96QA5 445 aa15.4■□□□□ 0.06
SCARB1-209ENST00000545305 APBA2Q99767 749 aa15.4■□□□□ 0.06
SCARB1-209ENST00000545305 HSD17B14Q9BPX1 270 aa15.4■□□□□ 0.06
SCARB1-209ENST00000545305 LXNQ9BS40 222 aa15.4■□□□□ 0.06
SCARB1-209ENST00000545305 RMND1Q9NWS8 449 aa15.4■□□□□ 0.06
SCARB1-209ENST00000545305 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.4■□□□□ 0.06
SCARB1-209ENST00000545305 RGL1Q9NZL6 768 aa15.4■□□□□ 0.06
SCARB1-209ENST00000545305 MCM3APO60318 1980 aa15.4■□□□□ 0.06
SCARB1-209ENST00000545305 E9PMD0 336 aa15.39■□□□□ 0.05
SCARB1-209ENST00000545305 DKC1O60832 514 aaKnown RBP eCLIP15.39■□□□□ 0.05
SCARB1-209ENST00000545305 CAVIN2O95810 425 aa15.39■□□□□ 0.05
SCARB1-209ENST00000545305 CCNE2O96020 404 aa15.39■□□□□ 0.05
SCARB1-209ENST00000545305 HOXC6P09630 235 aa15.39■□□□□ 0.05
SCARB1-209ENST00000545305 PLA2G4BP0C869 781 aa15.39■□□□□ 0.05
SCARB1-209ENST00000545305 QARSP47897 775 aaKnown RBP15.39■□□□□ 0.05
SCARB1-209ENST00000545305 NLRP12P59046 1061 aa15.39■□□□□ 0.05
SCARB1-209ENST00000545305 ASIC1P78348 528 aa15.39■□□□□ 0.05
SCARB1-209ENST00000545305 SP4Q02446 784 aa15.39■□□□□ 0.05
SCARB1-209ENST00000545305 CUL4BQ13620 913 aa15.39■□□□□ 0.05
SCARB1-209ENST00000545305 NT5DC1Q5TFE4 455 aa15.39■□□□□ 0.05
SCARB1-209ENST00000545305 MIS18BP1Q6P0N0 1132 aa15.39■□□□□ 0.05
SCARB1-209ENST00000545305 CYFIP1Q7L576 1253 aa15.39■□□□□ 0.05
SCARB1-209ENST00000545305 KCNK18Q7Z418 384 aa15.39■□□□□ 0.05
SCARB1-209ENST00000545305 BANK1Q8NDB2 785 aa15.39■□□□□ 0.05
SCARB1-209ENST00000545305 NPLOC4Q8TAT6 608 aa15.39■□□□□ 0.05
SCARB1-209ENST00000545305 CCDC43Q96MW1 224 aaKnown RBP15.39■□□□□ 0.05
SCARB1-209ENST00000545305 NACC1Q96RE7 527 aa15.39■□□□□ 0.05
SCARB1-209ENST00000545305 TINF2Q9BSI4 451 aa15.39■□□□□ 0.05
SCARB1-209ENST00000545305 CFHR5Q9BXR6 569 aa15.39■□□□□ 0.05
SCARB1-209ENST00000545305 BLZF1Q9H2G9 400 aa15.39■□□□□ 0.05
SCARB1-209ENST00000545305 ZSWIM4Q9H7M6 989 aa15.39■□□□□ 0.05
SCARB1-209ENST00000545305 MLXIPQ9HAP2 919 aa15.39■□□□□ 0.05
SCARB1-209ENST00000545305 BMP2KQ9NSY1 1161 aaPredicted RBP15.39■□□□□ 0.05
SCARB1-209ENST00000545305 MAN1B1Q9UKM7 699 aa15.39■□□□□ 0.05
SCARB1-209ENST00000545305 PCDHA10Q9Y5I2 948 aa15.39■□□□□ 0.05
SCARB1-209ENST00000545305 MGAMO43451 1857 aa15.39■□□□□ 0.05
SCARB1-209ENST00000545305 SORBS3O60504 671 aa15.38■□□□□ 0.05
SCARB1-209ENST00000545305 SLITRK3O94933 977 aa15.38■□□□□ 0.05
SCARB1-209ENST00000545305 EYA4O95677 639 aa15.38■□□□□ 0.05
SCARB1-209ENST00000545305 GGPS1O95749 300 aa15.38■□□□□ 0.05
SCARB1-209ENST00000545305 TBC1D8O95759 1140 aa15.38■□□□□ 0.05
SCARB1-209ENST00000545305 RPN1P04843 607 aaKnown RBP15.38■□□□□ 0.05
SCARB1-209ENST00000545305 TXNP10599 105 aaKnown RBP15.38■□□□□ 0.05
SCARB1-209ENST00000545305 PSMC4P43686 418 aa15.38■□□□□ 0.05
SCARB1-209ENST00000545305 ACTR2P61160 394 aa15.38■□□□□ 0.05
SCARB1-209ENST00000545305 PSMC5P62195 406 aa15.38■□□□□ 0.05
SCARB1-209ENST00000545305 LACTBP83111 547 aaPredicted RBP15.38■□□□□ 0.05
SCARB1-209ENST00000545305 ANO6Q4KMQ2 910 aa15.38■□□□□ 0.05
SCARB1-209ENST00000545305 METTL7BQ6UX53 244 aa15.38■□□□□ 0.05
SCARB1-209ENST00000545305 GAS2L3Q86XJ1 694 aa15.38■□□□□ 0.05
SCARB1-209ENST00000545305 SPATA20Q8TB22 786 aa15.38■□□□□ 0.05
SCARB1-209ENST00000545305 USP6NLQ92738 828 aa15.38■□□□□ 0.05
SCARB1-209ENST00000545305 ATP6V0A1Q93050 837 aa15.38■□□□□ 0.05
SCARB1-209ENST00000545305 MTRQ99707 1265 aa15.38■□□□□ 0.05
SCARB1-209ENST00000545305 C7orf25Q9BPX7 421 aa15.38■□□□□ 0.05
SCARB1-209ENST00000545305 TRIM9Q9C026 710 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms