RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 SYN1P17600 705 aa8.48□□□□□ -1.05
CPSF7-224ENST00000544990 HOXA13P31271 388 aaPredicted RBP8.48□□□□□ -1.05
CPSF7-224ENST00000544990 CPT1AP50416 773 aa8.48□□□□□ -1.05
CPSF7-224ENST00000544990 METAP2P50579 478 aaKnown RBP eCLIP8.48□□□□□ -1.05
CPSF7-224ENST00000544990 BEX3Q00994 111 aa8.48□□□□□ -1.05
CPSF7-224ENST00000544990 APOBRQ0VD83 1088 aa8.48□□□□□ -1.05
CPSF7-224ENST00000544990 SNX17Q15036 470 aa8.48□□□□□ -1.05
CPSF7-224ENST00000544990 FSCN1Q16658 493 aaKnown RBP8.48□□□□□ -1.05
CPSF7-224ENST00000544990 CCSAPQ6IQ19 270 aaPredicted RBP8.48□□□□□ -1.05
CPSF7-224ENST00000544990 KCNV1Q6PIU1 500 aa8.48□□□□□ -1.05
CPSF7-224ENST00000544990 SEPT14Q6ZU15 432 aa8.48□□□□□ -1.05
CPSF7-224ENST00000544990 RUFY3Q7L099 469 aa8.48□□□□□ -1.05
CPSF7-224ENST00000544990 FCHSD1Q86WN1 690 aa8.48□□□□□ -1.05
CPSF7-224ENST00000544990 OR6J1Q8NGC5 347 aa8.48□□□□□ -1.05
CPSF7-224ENST00000544990 SMARCC2Q8TAQ2 1214 aa8.48□□□□□ -1.05
CPSF7-224ENST00000544990 BRF1Q92994 677 aa8.48□□□□□ -1.05
CPSF7-224ENST00000544990 SEZ6LQ9BYH1 1024 aa8.48□□□□□ -1.05
CPSF7-224ENST00000544990 TM6SF1Q9BZW5 370 aa8.48□□□□□ -1.05
CPSF7-224ENST00000544990 COL20A1Q9P218 1284 aa8.48□□□□□ -1.05
CPSF7-224ENST00000544990 BRPF3Q9ULD4 1205 aa8.48□□□□□ -1.05
CPSF7-224ENST00000544990 CYP46A1Q9Y6A2 500 aa8.48□□□□□ -1.05
CPSF7-224ENST00000544990 MROH7Q68CQ1 1323 aa8.48□□□□□ -1.05
CPSF7-224ENST00000544990 MYH7BA7E2Y1 1941 aa8.47□□□□□ -1.05
CPSF7-224ENST00000544990 A0A0U1RQG5 324 aaPredicted RBP8.47□□□□□ -1.05
CPSF7-224ENST00000544990 DCDC2CA8MYV0 355 aa8.47□□□□□ -1.05
CPSF7-224ENST00000544990 hCG_1984214I3L0E3 225 aa8.47□□□□□ -1.05
CPSF7-224ENST00000544990 PIK3CDO00329 1044 aa8.47□□□□□ -1.05
CPSF7-224ENST00000544990 LZTS3O60299 673 aaPredicted RBP8.47□□□□□ -1.05
CPSF7-224ENST00000544990 STAM2O75886 525 aa8.47□□□□□ -1.05
CPSF7-224ENST00000544990 MYCLP12524 364 aaPredicted RBP8.47□□□□□ -1.05
CPSF7-224ENST00000544990 CCND2P30279 289 aa8.47□□□□□ -1.05
CPSF7-224ENST00000544990 PGM5Q15124 567 aa8.47□□□□□ -1.05
CPSF7-224ENST00000544990 TRIM60Q495X7 471 aa8.47□□□□□ -1.05
CPSF7-224ENST00000544990 VSIG10LQ86VR7 867 aa8.47□□□□□ -1.05
CPSF7-224ENST00000544990 ZNF713Q8N859 430 aaPredicted RBP8.47□□□□□ -1.05
CPSF7-224ENST00000544990 RETREG2Q8NC44 543 aa8.47□□□□□ -1.05
CPSF7-224ENST00000544990 TOX2Q96NM4 488 aa8.47□□□□□ -1.05
CPSF7-224ENST00000544990 LBHD1Q9BQE6 289 aaPredicted RBP8.47□□□□□ -1.05
CPSF7-224ENST00000544990 PDCD2LQ9BRP1 358 aa8.47□□□□□ -1.05
CPSF7-224ENST00000544990 AGXT2Q9BYV1 514 aa8.47□□□□□ -1.05
CPSF7-224ENST00000544990 PSTPIP2Q9H939 334 aa8.47□□□□□ -1.05
CPSF7-224ENST00000544990 MKI67P46013 3256 aaKnown RBP8.47□□□□□ -1.05
CPSF7-224ENST00000544990 A0A1W2PPC1 479 aa8.46□□□□□ -1.06
CPSF7-224ENST00000544990 hCG_1642624A0A1W2PR95 340 aa8.46□□□□□ -1.06
CPSF7-224ENST00000544990 RNF223E7ERA6 249 aa8.46□□□□□ -1.06
CPSF7-224ENST00000544990 ARVCFO00192 962 aa8.46□□□□□ -1.06
CPSF7-224ENST00000544990 CTAGE5O15320 804 aa8.46□□□□□ -1.06
CPSF7-224ENST00000544990 TLR3O15455 904 aaKnown RBP8.46□□□□□ -1.06
CPSF7-224ENST00000544990 KPNA6O60684 536 aa8.46□□□□□ -1.06
CPSF7-224ENST00000544990 PQBP1O60828 265 aaKnown RBP8.46□□□□□ -1.06
CPSF7-224ENST00000544990 GH1P01241 217 aa8.46□□□□□ -1.06
CPSF7-224ENST00000544990 CLTBP09497 229 aa8.46□□□□□ -1.06
CPSF7-224ENST00000544990 TGFB3P10600 412 aa8.46□□□□□ -1.06
CPSF7-224ENST00000544990 CDC27P30260 824 aa8.46□□□□□ -1.06
CPSF7-224ENST00000544990 BMP8BP34820 402 aa8.46□□□□□ -1.06
CPSF7-224ENST00000544990 ADD1P35611 737 aaKnown RBP8.46□□□□□ -1.06
CPSF7-224ENST00000544990 ANAPC15P60006 121 aa8.46□□□□□ -1.06
CPSF7-224ENST00000544990 AKAP17AQ02040 695 aaKnown RBP8.46□□□□□ -1.06
CPSF7-224ENST00000544990 TLE2Q04725 743 aa8.46□□□□□ -1.06
CPSF7-224ENST00000544990 MAP7D1Q3KQU3 841 aa8.46□□□□□ -1.06
CPSF7-224ENST00000544990 GNPTABQ3T906 1256 aa8.46□□□□□ -1.06
CPSF7-224ENST00000544990 HABP4Q5JVS0 413 aaKnown RBP8.46□□□□□ -1.06
CPSF7-224ENST00000544990 TMEM63BQ5T3F8 832 aa8.46□□□□□ -1.06
CPSF7-224ENST00000544990 CCDC62Q6P9F0 684 aa8.46□□□□□ -1.06
CPSF7-224ENST00000544990 USP17L6PQ6QN14 398 aa8.46□□□□□ -1.06
CPSF7-224ENST00000544990 CXCL17Q6UXB2 119 aa8.46□□□□□ -1.06
CPSF7-224ENST00000544990 HEATR3Q7Z4Q2 680 aa8.46□□□□□ -1.06
CPSF7-224ENST00000544990 TEX2Q8IWB9 1127 aa8.46□□□□□ -1.06
CPSF7-224ENST00000544990 FOXJ1Q92949 421 aa8.46□□□□□ -1.06
CPSF7-224ENST00000544990 TRAIPQ9BWF2 469 aa8.46□□□□□ -1.06
CPSF7-224ENST00000544990 GLT8D2Q9H1C3 349 aa8.46□□□□□ -1.06
CPSF7-224ENST00000544990 EHMT1Q9H9B1 1298 aa8.46□□□□□ -1.06
CPSF7-224ENST00000544990 PRDM5Q9NQX1 630 aaPredicted RBP8.46□□□□□ -1.06
CPSF7-224ENST00000544990 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.46□□□□□ -1.06
CPSF7-224ENST00000544990 CDV3Q9UKY7 258 aaKnown RBP8.46□□□□□ -1.06
CPSF7-224ENST00000544990 MRVI1Q9Y6F6 885 aa8.46□□□□□ -1.06
CPSF7-224ENST00000544990 V9GY48 417 aaPredicted RBP8.46□□□□□ -1.06
CPSF7-224ENST00000544990 CNTNAP5Q8WYK1 1306 aa8.46□□□□□ -1.06
CPSF7-224ENST00000544990 SPDYE3A6NKU9 549 aa8.45□□□□□ -1.06
CPSF7-224ENST00000544990 MEIS2O14770 477 aa8.45□□□□□ -1.06
CPSF7-224ENST00000544990 PRPF3O43395 683 aaKnown RBP8.45□□□□□ -1.06
CPSF7-224ENST00000544990 ARIH2O95376 493 aa8.45□□□□□ -1.06
CPSF7-224ENST00000544990 CD2BP2O95400 341 aaKnown RBP8.45□□□□□ -1.06
CPSF7-224ENST00000544990 MYL3P08590 195 aa8.45□□□□□ -1.06
CPSF7-224ENST00000544990 CDK7P50613 346 aa8.45□□□□□ -1.06
CPSF7-224ENST00000544990 NAPAP54920 295 aa8.45□□□□□ -1.06
CPSF7-224ENST00000544990 EVCP57679 992 aa8.45□□□□□ -1.06
CPSF7-224ENST00000544990 ITGA7Q13683 1181 aa8.45□□□□□ -1.06
CPSF7-224ENST00000544990 LAMC2Q13753 1193 aa8.45□□□□□ -1.06
CPSF7-224ENST00000544990 LY6KQ17RY6 165 aa8.45□□□□□ -1.06
CPSF7-224ENST00000544990 NBPF20Q3BBV1 942 aa8.45□□□□□ -1.06
CPSF7-224ENST00000544990 PPP1R18Q6NYC8 613 aa8.45□□□□□ -1.06
CPSF7-224ENST00000544990 XRRA1Q6P2D8 792 aa8.45□□□□□ -1.06
CPSF7-224ENST00000544990 ANKRD33Q7Z3H0 272 aa8.45□□□□□ -1.06
CPSF7-224ENST00000544990 DHX37Q8IY37 1157 aaKnown RBP8.45□□□□□ -1.06
CPSF7-224ENST00000544990 CCDC12Q8WUD4 166 aaPredicted RBP8.45□□□□□ -1.06
CPSF7-224ENST00000544990 COPS5Q92905 334 aa8.45□□□□□ -1.06
CPSF7-224ENST00000544990 ZNF274Q96GC6 653 aaPredicted RBP8.45□□□□□ -1.06
CPSF7-224ENST00000544990 GDF15Q99988 308 aa8.45□□□□□ -1.06
CPSF7-224ENST00000544990 OCSTAMPQ9BR26 566 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms