RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 MRPL47Q9HD33 250 aaKnown RBP11.2□□□□□ -0.62
PCDH9-204ENST00000544246 CDC23Q9UJX2 597 aa11.2□□□□□ -0.62
PCDH9-204ENST00000544246 AKT3Q9Y243 479 aa11.2□□□□□ -0.62
PCDH9-204ENST00000544246 JAK2O60674 1132 aa11.19□□□□□ -0.62
PCDH9-204ENST00000544246 TAF5LO75529 589 aa11.19□□□□□ -0.62
PCDH9-204ENST00000544246 NNTQ13423 1086 aa11.19□□□□□ -0.62
PCDH9-204ENST00000544246 TNFAIP1Q13829 316 aa11.19□□□□□ -0.62
PCDH9-204ENST00000544246 DNAJC24Q6P3W2 148 aa11.19□□□□□ -0.62
PCDH9-204ENST00000544246 FBXO11Q86XK2 927 aa11.19□□□□□ -0.62
PCDH9-204ENST00000544246 RAPGEF5Q92565 580 aa11.19□□□□□ -0.62
PCDH9-204ENST00000544246 RMDN2Q96LZ7 410 aa11.19□□□□□ -0.62
PCDH9-204ENST00000544246 DSCC1Q9BVC3 393 aa11.19□□□□□ -0.62
PCDH9-204ENST00000544246 CCDC90BQ9GZT6 254 aa11.19□□□□□ -0.62
PCDH9-204ENST00000544246 NOP53Q9NZM5 478 aaKnown RBP11.19□□□□□ -0.62
PCDH9-204ENST00000544246 CCNL1Q9UK58 526 aaPredicted RBP11.19□□□□□ -0.62
PCDH9-204ENST00000544246 ZNF215Q9UL58 517 aaPredicted RBP11.19□□□□□ -0.62
PCDH9-204ENST00000544246 ARHGEF37A1IGU5 675 aa11.19□□□□□ -0.62
PCDH9-204ENST00000544246 GOLGA8SH3BPF8 625 aa11.19□□□□□ -0.62
PCDH9-204ENST00000544246 PRPSAP2O60256 369 aa11.19□□□□□ -0.62
PCDH9-204ENST00000544246 AFPP02771 609 aaKnown RBP11.19□□□□□ -0.62
PCDH9-204ENST00000544246 PAPOLAP51003 745 aaKnown RBP11.19□□□□□ -0.62
PCDH9-204ENST00000544246 ETF1P62495 437 aaKnown RBP11.19□□□□□ -0.62
PCDH9-204ENST00000544246 FAM26FQ5R3K3 315 aa11.19□□□□□ -0.62
PCDH9-204ENST00000544246 C6orf118Q5T5N4 469 aa11.19□□□□□ -0.62
PCDH9-204ENST00000544246 ZNF654Q8IZM8 581 aa11.19□□□□□ -0.62
PCDH9-204ENST00000544246 KBTBD3Q8NAB2 608 aa11.19□□□□□ -0.62
PCDH9-204ENST00000544246 TMEM60Q9H2L4 133 aa11.19□□□□□ -0.62
PCDH9-204ENST00000544246 SYTL2Q9HCH5 934 aa11.19□□□□□ -0.62
PCDH9-204ENST00000544246 DDX28Q9NUL7 540 aaKnown RBP11.19□□□□□ -0.62
PCDH9-204ENST00000544246 YTHDC2Q9H6S0 1430 aaKnown RBP11.19□□□□□ -0.62
PCDH9-204ENST00000544246 IPO5O00410 1097 aaKnown RBP11.19□□□□□ -0.62
PCDH9-204ENST00000544246 SEC31AO94979 1220 aaKnown RBP11.19□□□□□ -0.62
PCDH9-204ENST00000544246 RBM6P78332 1123 aaKnown RBP11.19□□□□□ -0.62
PCDH9-204ENST00000544246 DHX9Q08211 1270 aaKnown RBP11.19□□□□□ -0.62
PCDH9-204ENST00000544246 SLC9A5Q14940 896 aa11.19□□□□□ -0.62
PCDH9-204ENST00000544246 ACAD11Q709F0 780 aa11.19□□□□□ -0.62
PCDH9-204ENST00000544246 KIAA2013Q8IYS2 634 aa11.19□□□□□ -0.62
PCDH9-204ENST00000544246 RETREG2Q8NC44 543 aa11.19□□□□□ -0.62
PCDH9-204ENST00000544246 PPP1R13BQ96KQ4 1090 aa11.19□□□□□ -0.62
PCDH9-204ENST00000544246 MTRQ99707 1265 aa11.19□□□□□ -0.62
PCDH9-204ENST00000544246 ZBTB40Q9NUA8 1239 aa11.19□□□□□ -0.62
PCDH9-204ENST00000544246 APOA1P02647 267 aa11.19□□□□□ -0.62
PCDH9-204ENST00000544246 ARPP19P56211 112 aa11.19□□□□□ -0.62
PCDH9-204ENST00000544246 MED21Q13503 144 aa11.19□□□□□ -0.62
PCDH9-204ENST00000544246 IMPG1Q17R60 797 aa11.19□□□□□ -0.62
PCDH9-204ENST00000544246 SIX6OS1Q8N1H7 587 aa11.19□□□□□ -0.62
PCDH9-204ENST00000544246 KDM1AO60341 852 aa11.19□□□□□ -0.62
PCDH9-204ENST00000544246 SLCO1A2P46721 670 aa11.19□□□□□ -0.62
PCDH9-204ENST00000544246 EXOC8Q8IYI6 725 aa11.19□□□□□ -0.62
PCDH9-204ENST00000544246 SLC26A7Q8TE54 656 aa11.19□□□□□ -0.62
PCDH9-204ENST00000544246 ABHD8Q96I13 439 aa11.19□□□□□ -0.62
PCDH9-204ENST00000544246 ACCSQ96QU6 501 aa11.19□□□□□ -0.62
PCDH9-204ENST00000544246 DIP2BQ9P265 1576 aa11.18□□□□□ -0.62
PCDH9-204ENST00000544246 SYNDIG1LA6NDD5 238 aa11.18□□□□□ -0.62
PCDH9-204ENST00000544246 HNRNPDLO14979 420 aaKnown RBP11.18□□□□□ -0.62
PCDH9-204ENST00000544246 DAB1O75553 588 aa11.18□□□□□ -0.62
PCDH9-204ENST00000544246 PSMC1P62191 440 aaKnown RBP11.18□□□□□ -0.62
PCDH9-204ENST00000544246 HIPK4Q8NE63 616 aa11.18□□□□□ -0.62
PCDH9-204ENST00000544246 PI4K2BQ8TCG2 481 aa11.18□□□□□ -0.62
PCDH9-204ENST00000544246 NACC1Q96RE7 527 aa11.18□□□□□ -0.62
PCDH9-204ENST00000544246 FLT4P35916 1363 aa11.18□□□□□ -0.62
PCDH9-204ENST00000544246 GAP43P17677 238 aa11.18□□□□□ -0.62
PCDH9-204ENST00000544246 POLA2Q14181 598 aa11.18□□□□□ -0.62
PCDH9-204ENST00000544246 ARL13BQ3SXY8 428 aa11.18□□□□□ -0.62
PCDH9-204ENST00000544246 FAM196AQ6ZSG2 479 aa11.18□□□□□ -0.62
PCDH9-204ENST00000544246 TTLL7Q6ZT98 887 aa11.18□□□□□ -0.62
PCDH9-204ENST00000544246 SLC35F6Q8N357 371 aa11.18□□□□□ -0.62
PCDH9-204ENST00000544246 VPS39Q96JC1 886 aa11.18□□□□□ -0.62
PCDH9-204ENST00000544246 ZNF594Q96JF6 807 aaPredicted RBP11.18□□□□□ -0.62
PCDH9-204ENST00000544246 ASPSCR1Q9BZE9 553 aa11.18□□□□□ -0.62
PCDH9-204ENST00000544246 FAM96AQ9H5X1 160 aa11.18□□□□□ -0.62
PCDH9-204ENST00000544246 GINM1Q9NU53 330 aa11.18□□□□□ -0.62
PCDH9-204ENST00000544246 CCDC87Q9NVE4 849 aa11.18□□□□□ -0.62
PCDH9-204ENST00000544246 INPP5FQ9Y2H2 1132 aa11.18□□□□□ -0.62
PCDH9-204ENST00000544246 ZMYM6O95789 1325 aa11.18□□□□□ -0.62
PCDH9-204ENST00000544246 A2ML1A8K2U0 1454 aa11.18□□□□□ -0.62
PCDH9-204ENST00000544246 MAST1Q9Y2H9 1570 aa11.18□□□□□ -0.62
PCDH9-204ENST00000544246 SGSM2O43147 1006 aa11.18□□□□□ -0.62
PCDH9-204ENST00000544246 FBLN1P23142 703 aa11.18□□□□□ -0.62
PCDH9-204ENST00000544246 MAP3K10Q02779 954 aa11.18□□□□□ -0.62
PCDH9-204ENST00000544246 SEPT2Q15019 361 aa11.18□□□□□ -0.62
PCDH9-204ENST00000544246 ELMSAN1Q6PJG2 1045 aa11.18□□□□□ -0.62
PCDH9-204ENST00000544246 RGS9BPQ6ZS82 235 aa11.18□□□□□ -0.62
PCDH9-204ENST00000544246 GJA10Q969M2 543 aa11.18□□□□□ -0.62
PCDH9-204ENST00000544246 LRRC4Q9HBW1 653 aa11.18□□□□□ -0.62
PCDH9-204ENST00000544246 VAMP4O75379 141 aa11.18□□□□□ -0.62
PCDH9-204ENST00000544246 MRPS15P82914 257 aaKnown RBP11.18□□□□□ -0.62
PCDH9-204ENST00000544246 ODR4Q5SWX8 454 aa11.18□□□□□ -0.62
PCDH9-204ENST00000544246 OR6B2Q6IFH4 312 aa11.18□□□□□ -0.62
PCDH9-204ENST00000544246 CENPUQ71F23 418 aa11.18□□□□□ -0.62
PCDH9-204ENST00000544246 AARSP49588 968 aaKnown RBP eCLIP11.17□□□□□ -0.623e-6■■■■■ 61.8
PCDH9-204ENST00000544246 EIF3BP55884 814 aaKnown RBP11.17□□□□□ -0.62
PCDH9-204ENST00000544246 ALS2CLQ60I27 953 aa11.17□□□□□ -0.62
PCDH9-204ENST00000544246 MIS18BP1Q6P0N0 1132 aa11.17□□□□□ -0.62
PCDH9-204ENST00000544246 RNF139Q8WU17 664 aa11.17□□□□□ -0.62
PCDH9-204ENST00000544246 ARHGEF1Q92888 912 aaKnown RBP11.17□□□□□ -0.62
PCDH9-204ENST00000544246 CALN1Q9BXU9 219 aa11.17□□□□□ -0.62
PCDH9-204ENST00000544246 LMBRD1Q9NUN5 540 aa11.17□□□□□ -0.62
PCDH9-204ENST00000544246 NOVA2Q9UNW9 492 aaKnown RBP11.17□□□□□ -0.62
PCDH9-204ENST00000544246 PRR23D1E9PI22 279 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms