RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 CCNE2O96020 404 aa24.74■■□□□ 1.55
OTUB1-212ENST00000543988 CYP2C18P33260 490 aa24.74■■□□□ 1.55
OTUB1-212ENST00000543988 KRT2P35908 639 aa24.74■■□□□ 1.55
OTUB1-212ENST00000543988 ACTR2P61160 394 aa24.74■■□□□ 1.55
OTUB1-212ENST00000543988 NR5A1Q13285 461 aa24.74■■□□□ 1.55
OTUB1-212ENST00000543988 KRT40Q6A162 431 aa24.74■■□□□ 1.55
OTUB1-212ENST00000543988 TMX3Q96JJ7 454 aa24.74■■□□□ 1.55
OTUB1-212ENST00000543988 ZNF215Q9UL58 517 aaPredicted RBP24.74■■□□□ 1.55
OTUB1-212ENST00000543988 DOCK5Q9H7D0 1870 aa24.74■■□□□ 1.55
OTUB1-212ENST00000543988 DHX15O43143 795 aaKnown RBP24.73■■□□□ 1.55
OTUB1-212ENST00000543988 MMP1P03956 469 aa24.73■■□□□ 1.55
OTUB1-212ENST00000543988 HMGN5P82970 282 aaKnown RBP24.73■■□□□ 1.55
OTUB1-212ENST00000543988 TRIM29Q14134 588 aa24.73■■□□□ 1.55
OTUB1-212ENST00000543988 PTGISQ16647 500 aa24.73■■□□□ 1.55
OTUB1-212ENST00000543988 EARS2Q5JPH6 523 aaKnown RBP24.73■■□□□ 1.55
OTUB1-212ENST00000543988 PIK3AP1Q6ZUJ8 805 aa24.73■■□□□ 1.55
OTUB1-212ENST00000543988 TNFRSF25Q93038 417 aa24.73■■□□□ 1.55
OTUB1-212ENST00000543988 BRMS1Q9HCU9 246 aa24.73■■□□□ 1.55
OTUB1-212ENST00000543988 NOD1Q9Y239 953 aa24.73■■□□□ 1.55
OTUB1-212ENST00000543988 MYH7BA7E2Y1 1941 aa24.73■■□□□ 1.55
OTUB1-212ENST00000543988 FAM205CA6NFA0 338 aa24.72■■□□□ 1.55
OTUB1-212ENST00000543988 EPHB4P54760 987 aa24.72■■□□□ 1.55
OTUB1-212ENST00000543988 FPGSQ05932 587 aa24.72■■□□□ 1.55
OTUB1-212ENST00000543988 HIC1Q14526 733 aa24.72■■□□□ 1.55
OTUB1-212ENST00000543988 MFSD5Q6N075 450 aa24.72■■□□□ 1.55
OTUB1-212ENST00000543988 PCYT2Q99447 389 aa24.72■■□□□ 1.55
OTUB1-212ENST00000543988 EMSYQ7Z589 1322 aa24.71■■□□□ 1.55
OTUB1-212ENST00000543988 CYP3A7-CYP3A51PA0A087WV96 503 aa24.71■■□□□ 1.55
OTUB1-212ENST00000543988 A0A1W2PPC1 479 aa24.71■■□□□ 1.55
OTUB1-212ENST00000543988 MSH4O15457 936 aa24.71■■□□□ 1.55
OTUB1-212ENST00000543988 SMIM10L2AP0DMW4 78 aa24.71■■□□□ 1.55
OTUB1-212ENST00000543988 SMIM10L2BP0DMW5 78 aa24.71■■□□□ 1.55
OTUB1-212ENST00000543988 CYP3A7P24462 503 aa24.71■■□□□ 1.55
OTUB1-212ENST00000543988 GUCY1B3Q02153 619 aa24.71■■□□□ 1.55
OTUB1-212ENST00000543988 DIS3L2Q8IYB7 885 aaKnown RBP24.71■■□□□ 1.55
OTUB1-212ENST00000543988 MBOAT7Q96N66 472 aa24.71■■□□□ 1.55
OTUB1-212ENST00000543988 WNT8AQ9H1J5 351 aa24.71■■□□□ 1.55
OTUB1-212ENST00000543988 LGR5O75473 907 aa24.7■■□□□ 1.54
OTUB1-212ENST00000543988 MARK3P27448 753 aa24.7■■□□□ 1.54
OTUB1-212ENST00000543988 HOXC8P31273 242 aa24.7■■□□□ 1.54
OTUB1-212ENST00000543988 MCM2P49736 904 aa24.7■■□□□ 1.54
OTUB1-212ENST00000543988 ZNF200P98182 395 aaPredicted RBP24.7■■□□□ 1.54
OTUB1-212ENST00000543988 LETM2Q2VYF4 491 aa24.7■■□□□ 1.54
OTUB1-212ENST00000543988 Q4G0T1 1027 aa24.7■■□□□ 1.54
OTUB1-212ENST00000543988 MOXD1Q6UVY6 613 aa24.7■■□□□ 1.54
OTUB1-212ENST00000543988 NEK8Q86SG6 692 aa24.7■■□□□ 1.54
OTUB1-212ENST00000543988 TDHQ8IZJ6 230 aa24.7■■□□□ 1.54
OTUB1-212ENST00000543988 GLG1Q92896 1179 aa24.7■■□□□ 1.54
OTUB1-212ENST00000543988 C8orf76Q96K31 380 aa24.7■■□□□ 1.54
OTUB1-212ENST00000543988 TBC1D22BQ9NU19 505 aa24.7■■□□□ 1.54
OTUB1-212ENST00000543988 BTBD18B2RXH4 712 aa24.69■■□□□ 1.54
OTUB1-212ENST00000543988 CSF2RAP15509 400 aa24.69■■□□□ 1.54
OTUB1-212ENST00000543988 CCL23P55773 120 aa24.69■■□□□ 1.54
OTUB1-212ENST00000543988 DHX38Q92620 1227 aaKnown RBP24.69■■□□□ 1.54
OTUB1-212ENST00000543988 SLC5A5Q92911 643 aa24.69■■□□□ 1.54
OTUB1-212ENST00000543988 GJA10Q969M2 543 aa24.69■■□□□ 1.54
OTUB1-212ENST00000543988 RNPEPQ9H4A4 650 aa24.69■■□□□ 1.54
OTUB1-212ENST00000543988 SMARCAD1Q9H4L7 1026 aa24.69■■□□□ 1.54
OTUB1-212ENST00000543988 DDX25Q9UHL0 483 aaKnown RBP24.69■■□□□ 1.54
OTUB1-212ENST00000543988 C17orf102A2RUQ5 167 aa24.68■■□□□ 1.54
OTUB1-212ENST00000543988 SLC37A4O43826 429 aa24.68■■□□□ 1.54
OTUB1-212ENST00000543988 ATG7O95352 703 aa24.68■■□□□ 1.54
OTUB1-212ENST00000543988 C9orf50Q5SZB4 431 aa24.68■■□□□ 1.54
OTUB1-212ENST00000543988 TMEM199Q8N511 208 aa24.68■■□□□ 1.54
OTUB1-212ENST00000543988 FAM184AQ8NB25 1140 aa24.68■■□□□ 1.54
OTUB1-212ENST00000543988 ERAP1Q9NZ08 941 aa24.68■■□□□ 1.54
OTUB1-212ENST00000543988 KRT76Q01546 638 aa24.67■■□□□ 1.54
OTUB1-212ENST00000543988 PPIGQ13427 754 aaKnown RBP eCLIP24.67■■□□□ 1.547e-8■■□□□ 13.6
OTUB1-212ENST00000543988 ZNF746Q6NUN9 644 aaPredicted RBP24.67■■□□□ 1.54
OTUB1-212ENST00000543988 ABHD15Q6UXT9 468 aa24.67■■□□□ 1.54
OTUB1-212ENST00000543988 ETNPPLQ8TBG4 499 aa24.67■■□□□ 1.54
OTUB1-212ENST00000543988 LMBR1Q8WVP7 490 aa24.67■■□□□ 1.54
OTUB1-212ENST00000543988 WNT8BQ93098 351 aa24.67■■□□□ 1.54
OTUB1-212ENST00000543988 RIT2Q99578 217 aa24.67■■□□□ 1.54
OTUB1-212ENST00000543988 AZI2Q9H6S1 392 aa24.67■■□□□ 1.54
OTUB1-212ENST00000543988 SETD4Q9NVD3 440 aa24.67■■□□□ 1.54
OTUB1-212ENST00000543988 IGKV6D-21A0A0A0MT36 114 aa24.66■■□□□ 1.54
OTUB1-212ENST00000543988 PITPNM1O00562 1244 aa24.66■■□□□ 1.54
OTUB1-212ENST00000543988 GAS7O60861 476 aa24.66■■□□□ 1.54
OTUB1-212ENST00000543988 GCFC2P16383 781 aaKnown RBP24.66■■□□□ 1.54
OTUB1-212ENST00000543988 PTK7Q13308 1070 aa24.66■■□□□ 1.54
OTUB1-212ENST00000543988 BFSP2Q13515 415 aa24.66■■□□□ 1.54
OTUB1-212ENST00000543988 LRCH2Q5VUJ6 765 aa24.66■■□□□ 1.54
OTUB1-212ENST00000543988 MIS18BP1Q6P0N0 1132 aa24.66■■□□□ 1.54
OTUB1-212ENST00000543988 FBXO18Q8NFZ0 1043 aa24.66■■□□□ 1.54
OTUB1-212ENST00000543988 SCLYQ96I15 445 aa24.66■■□□□ 1.54
OTUB1-212ENST00000543988 TCEAL9Q9UHQ7 104 aa24.66■■□□□ 1.54
OTUB1-212ENST00000543988 BACH1O14867 736 aa24.65■■□□□ 1.54
OTUB1-212ENST00000543988 PPFIA1Q13136 1202 aa24.65■■□□□ 1.54
OTUB1-212ENST00000543988 SAFBQ15424 915 aaKnown RBP eCLIP24.65■■□□□ 1.54
OTUB1-212ENST00000543988 SHHQ15465 462 aa24.65■■□□□ 1.54
OTUB1-212ENST00000543988 TRIM71Q2Q1W2 868 aaKnown RBP24.65■■□□□ 1.54
OTUB1-212ENST00000543988 PPP4R3AQ6IN85 833 aa24.65■■□□□ 1.54
OTUB1-212ENST00000543988 SERINC5Q86VE9 423 aa24.65■■□□□ 1.54
OTUB1-212ENST00000543988 CCDC60Q8IWA6 550 aaPredicted RBP24.65■■□□□ 1.54
OTUB1-212ENST00000543988 CCDC155Q8N6L0 562 aa24.65■■□□□ 1.54
OTUB1-212ENST00000543988 CAGE1Q8TC20 777 aa24.65■■□□□ 1.54
OTUB1-212ENST00000543988 ATP6V0A1Q93050 837 aa24.65■■□□□ 1.54
OTUB1-212ENST00000543988 TREHO43280 583 aa24.64■■□□□ 1.54
OTUB1-212ENST00000543988 CCNT1O60563 726 aaKnown RBP24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms