RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 ENGASEQ8NFI3 743 aa20.99■□□□□ 0.95
SUDS3-204ENST00000543473 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.99■□□□□ 0.95
SUDS3-204ENST00000543473 FBXO41Q8TF61 875 aa20.99■□□□□ 0.95
SUDS3-204ENST00000543473 VCX3AQ9NNX9 186 aa20.99■□□□□ 0.95
SUDS3-204ENST00000543473 GCNT4Q9P109 453 aa20.99■□□□□ 0.95
SUDS3-204ENST00000543473 EIF3HO15372 352 aaKnown RBP eCLIP20.99■□□□□ 0.95
SUDS3-204ENST00000543473 ECM2O94769 699 aaPredicted RBP20.99■□□□□ 0.95
SUDS3-204ENST00000543473 PSMC2P35998 433 aaKnown RBP20.99■□□□□ 0.95
SUDS3-204ENST00000543473 SUGCTQ9HAC7 445 aa20.99■□□□□ 0.95
SUDS3-204ENST00000543473 LY9Q9HBG7 655 aa20.99■□□□□ 0.95
SUDS3-204ENST00000543473 PPP1R9AQ9ULJ8 1098 aa20.99■□□□□ 0.95
SUDS3-204ENST00000543473 A0A1W2PQC6 194 aa20.99■□□□□ 0.95
SUDS3-204ENST00000543473 K7ENM7 598 aa20.99■□□□□ 0.95
SUDS3-204ENST00000543473 MYO1EQ12965 1108 aa20.99■□□□□ 0.95
SUDS3-204ENST00000543473 HNRNPLLQ8WVV9 542 aaKnown RBP20.99■□□□□ 0.95
SUDS3-204ENST00000543473 ANAPC5Q9UJX4 755 aa20.99■□□□□ 0.95
SUDS3-204ENST00000543473 FXR1P51114 621 aaKnown RBP eCLIP20.98■□□□□ 0.95
SUDS3-204ENST00000543473 SNX24Q9Y343 169 aa20.98■□□□□ 0.95
SUDS3-204ENST00000543473 RABGAP1Q9Y3P9 1069 aa20.98■□□□□ 0.95
SUDS3-204ENST00000543473 NBPF26B4DH59 902 aa20.98■□□□□ 0.95
SUDS3-204ENST00000543473 NR1I3Q14994 352 aa20.98■□□□□ 0.95
SUDS3-204ENST00000543473 NBPF10Q6P3W6 841 aaKnown RBP20.98■□□□□ 0.95
SUDS3-204ENST00000543473 ZNF449Q6P9G9 518 aa20.98■□□□□ 0.95
SUDS3-204ENST00000543473 RNF168Q8IYW5 571 aaPredicted RBP20.98■□□□□ 0.95
SUDS3-204ENST00000543473 CPXCR1Q8N123 301 aa20.98■□□□□ 0.95
SUDS3-204ENST00000543473 NBPF15Q8N660 670 aa20.98■□□□□ 0.95
SUDS3-204ENST00000543473 GSDMBQ8TAX9 411 aa20.98■□□□□ 0.95
SUDS3-204ENST00000543473 PPP4R1Q8TF05 950 aa20.98■□□□□ 0.95
SUDS3-204ENST00000543473 FUT8Q9BYC5 575 aa20.98■□□□□ 0.95
SUDS3-204ENST00000543473 Q9H521 79 aa20.98■□□□□ 0.95
SUDS3-204ENST00000543473 SETSIPP0DME0 302 aa20.98■□□□□ 0.95
SUDS3-204ENST00000543473 KAZNQ674X7 775 aa20.98■□□□□ 0.95
SUDS3-204ENST00000543473 CCNI2Q6ZMN8 369 aaPredicted RBP20.98■□□□□ 0.95
SUDS3-204ENST00000543473 NRKQ7Z2Y5 1582 aa20.98■□□□□ 0.95
SUDS3-204ENST00000543473 SART1O43290 800 aaKnown RBP20.98■□□□□ 0.95
SUDS3-204ENST00000543473 GEN1Q17RS7 908 aa20.98■□□□□ 0.95
SUDS3-204ENST00000543473 ZNF354CQ86Y25 554 aa20.98■□□□□ 0.95
SUDS3-204ENST00000543473 REXO1L1PQ8IX06 675 aa20.98■□□□□ 0.95
SUDS3-204ENST00000543473 ZNF653Q96CK0 615 aa20.98■□□□□ 0.95
SUDS3-204ENST00000543473 TAF1DQ9H5J8 278 aaPredicted RBP20.98■□□□□ 0.95
SUDS3-204ENST00000543473 USH1CQ9Y6N9 552 aa20.98■□□□□ 0.95
SUDS3-204ENST00000543473 NRXN1Q9ULB1 1477 aa20.98■□□□□ 0.95
SUDS3-204ENST00000543473 CLIC2O15247 247 aa20.97■□□□□ 0.95
SUDS3-204ENST00000543473 DKC1O60832 514 aaKnown RBP eCLIP20.97■□□□□ 0.95
SUDS3-204ENST00000543473 RASGRF1Q13972 1273 aa20.97■□□□□ 0.95
SUDS3-204ENST00000543473 ODR4Q5SWX8 454 aa20.97■□□□□ 0.95
SUDS3-204ENST00000543473 C1orf112Q9NSG2 853 aa20.97■□□□□ 0.95
SUDS3-204ENST00000543473 SNAP23O00161 211 aa20.97■□□□□ 0.95
SUDS3-204ENST00000543473 CORO7P57737 925 aa20.97■□□□□ 0.95
SUDS3-204ENST00000543473 LMNB2Q03252 620 aa20.97■□□□□ 0.95
SUDS3-204ENST00000543473 SEPT2Q15019 361 aa20.97■□□□□ 0.95
SUDS3-204ENST00000543473 TMTC3Q6ZXV5 915 aa20.97■□□□□ 0.95
SUDS3-204ENST00000543473 SH2D3CQ8N5H7 860 aa20.97■□□□□ 0.95
SUDS3-204ENST00000543473 TSC22D3Q99576 134 aa20.97■□□□□ 0.95
SUDS3-204ENST00000543473 HPCAL4Q9UM19 191 aa20.97■□□□□ 0.95
SUDS3-204ENST00000543473 CAPN11Q9UMQ6 739 aa20.97■□□□□ 0.95
SUDS3-204ENST00000543473 SNX12Q9UMY4 172 aa20.97■□□□□ 0.95
SUDS3-204ENST00000543473 POLR1AO95602 1720 aaPredicted RBP20.97■□□□□ 0.95
SUDS3-204ENST00000543473 KIF1CO43896 1103 aaKnown RBP20.97■□□□□ 0.95
SUDS3-204ENST00000543473 HOXA7P31268 230 aaPredicted RBP20.97■□□□□ 0.95
SUDS3-204ENST00000543473 NSFP46459 744 aaKnown RBP20.97■□□□□ 0.95
SUDS3-204ENST00000543473 TAB3Q8N5C8 712 aaPredicted RBP20.97■□□□□ 0.95
SUDS3-204ENST00000543473 NOA1Q8NC60 698 aaKnown RBP20.97■□□□□ 0.95
SUDS3-204ENST00000543473 ADD3Q9UEY8 706 aaKnown RBP20.97■□□□□ 0.95
SUDS3-204ENST00000543473 ACSL3O95573 720 aa20.96■□□□□ 0.95
SUDS3-204ENST00000543473 SERPINB6P35237 376 aa20.96■□□□□ 0.95
SUDS3-204ENST00000543473 RCN2Q14257 317 aa20.96■□□□□ 0.95
SUDS3-204ENST00000543473 CXorf56Q9H5V9 222 aa20.96■□□□□ 0.95
SUDS3-204ENST00000543473 CEP72Q9P209 647 aa20.96■□□□□ 0.95
SUDS3-204ENST00000543473 ZNF185O15231 689 aa20.96■□□□□ 0.95
SUDS3-204ENST00000543473 MYCLP12524 364 aaPredicted RBP20.96■□□□□ 0.95
SUDS3-204ENST00000543473 RFC1P35251 1148 aaPredicted RBP20.96■□□□□ 0.95
SUDS3-204ENST00000543473 IRAK1P51617 712 aa20.96■□□□□ 0.95
SUDS3-204ENST00000543473 KRT26Q7Z3Y9 468 aa20.96■□□□□ 0.95
SUDS3-204ENST00000543473 PCDHA1Q9Y5I3 950 aa20.96■□□□□ 0.95
SUDS3-204ENST00000543473 TAF6LQ9Y6J9 622 aa20.96■□□□□ 0.95
SUDS3-204ENST00000543473 PFDN1O60925 122 aa20.96■□□□□ 0.95
SUDS3-204ENST00000543473 GMNNO75496 209 aa20.96■□□□□ 0.95
SUDS3-204ENST00000543473 FBXO2Q9UK22 296 aaPredicted RBP20.96■□□□□ 0.95
SUDS3-204ENST00000543473 PREX1Q8TCU6 1659 aa20.96■□□□□ 0.95
SUDS3-204ENST00000543473 DDX47Q9H0S4 455 aaKnown RBP20.96■□□□□ 0.95
SUDS3-204ENST00000543473 STK10O94804 968 aaKnown RBP20.95■□□□□ 0.95
SUDS3-204ENST00000543473 LIMA1Q9UHB6 759 aaKnown RBP20.95■□□□□ 0.95
SUDS3-204ENST00000543473 PITPNM3Q9BZ71 974 aa20.95■□□□□ 0.94
SUDS3-204ENST00000543473 TMOD4Q9NZQ9 345 aa20.95■□□□□ 0.94
SUDS3-204ENST00000543473 DIP2AQ14689 1571 aa20.95■□□□□ 0.94
SUDS3-204ENST00000543473 UNC13DQ70J99 1090 aa20.95■□□□□ 0.94
SUDS3-204ENST00000543473 MIER3Q7Z3K6 550 aa20.95■□□□□ 0.94
SUDS3-204ENST00000543473 BSDC1Q9NW68 430 aaPredicted RBP20.95■□□□□ 0.94
SUDS3-204ENST00000543473 NARFQ9UHQ1 456 aa20.95■□□□□ 0.94
SUDS3-204ENST00000543473 ADGRB1O14514 1584 aa20.95■□□□□ 0.94
SUDS3-204ENST00000543473 MAPK4P31152 587 aa20.95■□□□□ 0.94
SUDS3-204ENST00000543473 PPP2R5DQ14738 602 aa20.95■□□□□ 0.94
SUDS3-204ENST00000543473 VTI1AQ96AJ9 217 aa20.95■□□□□ 0.94
SUDS3-204ENST00000543473 CHMP6Q96FZ7 201 aa20.95■□□□□ 0.94
SUDS3-204ENST00000543473 EPN3Q9H201 632 aa20.95■□□□□ 0.94
SUDS3-204ENST00000543473 GCFC2P16383 781 aaKnown RBP20.94■□□□□ 0.94
SUDS3-204ENST00000543473 HDLBPQ00341 1268 aaKnown RBP20.94■□□□□ 0.94
SUDS3-204ENST00000543473 RBM43Q6ZSC3 357 aaKnown RBP20.94■□□□□ 0.94
SUDS3-204ENST00000543473 CCT8L2Q96SF2 557 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms