RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 EEF2P13639 858 aaKnown RBP5.94□□□□□ -1.46
CLIP1-217ENST00000543205 TM4SF4P48230 202 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 USP14P54578 494 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 HMGCS2P54868 508 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 BACE1P56817 501 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 LRRC41Q15345 812 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 ZYXQ15942 572 aaKnown RBP5.94□□□□□ -1.46
CLIP1-217ENST00000543205 CCDC178Q5BJE1 867 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 PRRT2Q7Z6L0 340 aaPredicted RBP5.94□□□□□ -1.46
CLIP1-217ENST00000543205 IQCA1Q86XH1 822 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 CLEC10AQ8IUN9 316 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 NCOA7Q8NI08 942 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 GEMIN8Q9NWZ8 242 aaKnown RBP5.94□□□□□ -1.46
CLIP1-217ENST00000543205 MTMR4Q9NYA4 1195 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 MAP3K20Q9NYL2 800 aaKnown RBP5.94□□□□□ -1.46
CLIP1-217ENST00000543205 STIM2Q9P246 746 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 CLIP2Q9UDT6 1046 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 DOCK1Q14185 1865 aa5.93□□□□□ -1.46
CLIP1-217ENST00000543205 IGKV6D-41A0A0C4DH26 115 aa5.93□□□□□ -1.46
CLIP1-217ENST00000543205 PNMA6FA0A0J9YX94 578 aa5.93□□□□□ -1.46
CLIP1-217ENST00000543205 CDC14CA4D256 554 aa5.93□□□□□ -1.46
CLIP1-217ENST00000543205 TGFBR3LH3BV60 316 aa5.93□□□□□ -1.46
CLIP1-217ENST00000543205 GNA15P30679 374 aa5.93□□□□□ -1.46
CLIP1-217ENST00000543205 HSPA4P34932 840 aa5.93□□□□□ -1.46
CLIP1-217ENST00000543205 MASP1P48740 699 aa5.93□□□□□ -1.46
CLIP1-217ENST00000543205 KRT32Q14532 448 aa5.93□□□□□ -1.46
CLIP1-217ENST00000543205 C8orf34Q49A92 452 aa5.93□□□□□ -1.46
CLIP1-217ENST00000543205 TTC39BQ5VTQ0 682 aaPredicted RBP5.93□□□□□ -1.46
CLIP1-217ENST00000543205 ACER1Q8TDN7 264 aa5.93□□□□□ -1.46
CLIP1-217ENST00000543205 BRI3BPQ8WY22 251 aa5.93□□□□□ -1.46
CLIP1-217ENST00000543205 MKL1Q969V6 931 aa5.93□□□□□ -1.46
CLIP1-217ENST00000543205 IFT43Q96FT9 208 aa5.93□□□□□ -1.46
CLIP1-217ENST00000543205 CEP95Q96GE4 821 aa5.93□□□□□ -1.46
CLIP1-217ENST00000543205 ARPC5LQ9BPX5 153 aa5.93□□□□□ -1.46
CLIP1-217ENST00000543205 SENP7Q9BQF6 1050 aa5.93□□□□□ -1.46
CLIP1-217ENST00000543205 UBAC1Q9BSL1 405 aa5.93□□□□□ -1.46
CLIP1-217ENST00000543205 USP26Q9BXU7 913 aa5.93□□□□□ -1.46
CLIP1-217ENST00000543205 KIAA1683Q9H0B3 1180 aa5.93□□□□□ -1.46
CLIP1-217ENST00000543205 TCP11L1Q9NUJ3 509 aa5.93□□□□□ -1.46
CLIP1-217ENST00000543205 ZSWIM5Q9P217 1185 aa5.93□□□□□ -1.46
CLIP1-217ENST00000543205 NYAP2Q9P242 653 aa5.93□□□□□ -1.46
CLIP1-217ENST00000543205 GGT7Q9UJ14 662 aa5.93□□□□□ -1.46
CLIP1-217ENST00000543205 STX8Q9UNK0 236 aa5.93□□□□□ -1.46
CLIP1-217ENST00000543205 PLIN4Q96Q06 1357 aa5.93□□□□□ -1.46
CLIP1-217ENST00000543205 A0A1W2PRG0 241 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 ERICH2A1L162 156 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 NMT2O60551 498 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 ETFBP38117 255 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 CHMP4BP1P59074 171 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 PABPC4Q13310 644 aaKnown RBP eCLIP5.92□□□□□ -1.46
CLIP1-217ENST00000543205 LBRQ14739 615 aaKnown RBP5.92□□□□□ -1.46
CLIP1-217ENST00000543205 SART3Q15020 963 aaKnown RBP5.92□□□□□ -1.46
CLIP1-217ENST00000543205 STOX1Q6ZVD7 989 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 KIAA0907Q7Z7F0 614 aaPredicted RBP5.92□□□□□ -1.46
CLIP1-217ENST00000543205 ANKRD23Q86SG2 305 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 NLRP8Q86W28 1048 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 SIAH1Q8IUQ4 282 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 TRIM22Q8IYM9 498 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 LILRB2Q8N423 598 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 GPRASP2Q96D09 838 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 TTC14Q96N46 770 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 NEK1Q96PY6 1258 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 DEPDC7Q96QD5 511 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 FAM129BQ96TA1 746 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 APBA2Q99767 749 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 PTPN18Q99952 460 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 ZKSCAN3Q9BRR0 538 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 IL17RBQ9NRM6 502 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 HOMER2Q9NSB8 354 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 CNTN3Q9P232 1028 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 NRBP1Q9UHY1 535 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 TMX2Q9Y320 296 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 MRVI1Q9Y6F6 885 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 TAF6LQ9Y6J9 622 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 BTBD19C9JJ37 291 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 PDHXO00330 501 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 IGF2BP3O00425 579 aaKnown RBP eCLIP5.92□□□□□ -1.46
CLIP1-217ENST00000543205 PSMA5P28066 241 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 MCM5P33992 734 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 DBN1Q16643 649 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 TKFCQ3LXA3 575 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 CCSAPQ6IQ19 270 aaPredicted RBP5.92□□□□□ -1.46
CLIP1-217ENST00000543205 CYB5R4Q7L1T6 521 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 DGKHQ86XP1 1220 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 ETFBKMTQ8IXQ9 262 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 FAM43AQ8N2R8 423 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 LPAR1Q92633 364 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 ZNF837Q96EG3 531 aaPredicted RBP5.92□□□□□ -1.46
CLIP1-217ENST00000543205 SLKQ9H2G2 1235 aaPredicted RBP5.92□□□□□ -1.46
CLIP1-217ENST00000543205 VCPKMTQ9H867 229 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 RNF186Q9NXI6 227 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 SYNPO2Q9UMS6 1093 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 AGTPBP1Q9UPW5 1226 aa5.92□□□□□ -1.46
CLIP1-217ENST00000543205 TNKSO95271 1327 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 CFAP69A5D8W1 941 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 F5H6K3 240 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 IFIT3O14879 490 aaKnown RBP5.91□□□□□ -1.46
CLIP1-217ENST00000543205 CA12O43570 354 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 TRPA1O75762 1119 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 THBS1P07996 1170 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms