RNA–Protein interactions for RNA: ENST00000543184.5

PRAME-214, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,758 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-214ENST00000543184 C7orf25Q9BPX7 421 aa15.64■□□□□ 0.09
PRAME-214ENST00000543184 AP1M1Q9BXS5 423 aa15.64■□□□□ 0.09
PRAME-214ENST00000543184 ADAMTS1Q9UHI8 967 aa15.64■□□□□ 0.09
PRAME-214ENST00000543184 GJA3Q9Y6H8 435 aa15.64■□□□□ 0.09
PRAME-214ENST00000543184 COL4A5P29400 1685 aa15.64■□□□□ 0.09
PRAME-214ENST00000543184 RAD51CO43502 376 aa15.64■□□□□ 0.09
PRAME-214ENST00000543184 ECM1Q16610 540 aa15.64■□□□□ 0.09
PRAME-214ENST00000543184 NAA35Q5VZE5 725 aa15.64■□□□□ 0.09
PRAME-214ENST00000543184 CENPPQ6IPU0 288 aa15.64■□□□□ 0.09
PRAME-214ENST00000543184 DZIP1Q86YF9 867 aaKnown RBP15.64■□□□□ 0.09
PRAME-214ENST00000543184 COA7Q96BR5 231 aa15.64■□□□□ 0.09
PRAME-214ENST00000543184 NOX5Q96PH1 765 aa15.64■□□□□ 0.09
PRAME-214ENST00000543184 PNMA5Q96PV4 448 aa15.64■□□□□ 0.09
PRAME-214ENST00000543184 PIGSQ96S52 555 aa15.64■□□□□ 0.09
PRAME-214ENST00000543184 NPHP3-ACAD11A0A0J9YXS1 232 aa15.64■□□□□ 0.09
PRAME-214ENST00000543184 A0A1W2PQJ5 194 aa15.64■□□□□ 0.09
PRAME-214ENST00000543184 E7EVH7 732 aa15.64■□□□□ 0.09
PRAME-214ENST00000543184 TMOD1P28289 359 aa15.64■□□□□ 0.09
PRAME-214ENST00000543184 SPRED3Q2MJR0 410 aa15.64■□□□□ 0.09
PRAME-214ENST00000543184 PDXDC1Q6P996 788 aa15.64■□□□□ 0.09
PRAME-214ENST00000543184 EMBQ6PCB8 327 aa15.64■□□□□ 0.09
PRAME-214ENST00000543184 SV2BQ7L1I2 683 aa15.64■□□□□ 0.09
PRAME-214ENST00000543184 IQCKQ8N0W5 287 aa15.64■□□□□ 0.09
PRAME-214ENST00000543184 JPH2Q9BR39 696 aaPredicted RBP15.64■□□□□ 0.09
PRAME-214ENST00000543184 FRMPD2Q68DX3 1309 aaPredicted RBP15.63■□□□□ 0.09
PRAME-214ENST00000543184 MYH1P12882 1939 aa15.63■□□□□ 0.09
PRAME-214ENST00000543184 A0A087X0T9 212 aa15.63■□□□□ 0.09
PRAME-214ENST00000543184 FAM228BP0C875 321 aa15.63■□□□□ 0.09
PRAME-214ENST00000543184 NR1D1P20393 614 aa15.63■□□□□ 0.09
PRAME-214ENST00000543184 RBM5P52756 815 aaKnown RBP eCLIP15.63■□□□□ 0.09
PRAME-214ENST00000543184 CACNB3P54284 484 aa15.63■□□□□ 0.09
PRAME-214ENST00000543184 EIF6P56537 245 aaKnown RBP15.63■□□□□ 0.09
PRAME-214ENST00000543184 RAPGEF1Q13905 1077 aa15.63■□□□□ 0.09
PRAME-214ENST00000543184 GRM4Q14833 912 aa15.63■□□□□ 0.09
PRAME-214ENST00000543184 MAN2A1Q16706 1144 aa15.63■□□□□ 0.09
PRAME-214ENST00000543184 CFAP221Q4G0U5 840 aa15.63■□□□□ 0.09
PRAME-214ENST00000543184 RBM26Q5T8P6 1007 aaKnown RBP15.63■□□□□ 0.09
PRAME-214ENST00000543184 CNNM4Q6P4Q7 775 aa15.63■□□□□ 0.09
PRAME-214ENST00000543184 CLEC10AQ8IUN9 316 aa15.63■□□□□ 0.09
PRAME-214ENST00000543184 RTKN2Q8IZC4 609 aa15.63■□□□□ 0.09
PRAME-214ENST00000543184 FAM133AQ8N9E0 248 aa15.63■□□□□ 0.09
PRAME-214ENST00000543184 EYA3Q99504 573 aa15.63■□□□□ 0.09
PRAME-214ENST00000543184 LSM14BQ9BX40 385 aaKnown RBP15.63■□□□□ 0.09
PRAME-214ENST00000543184 PLAAQ9Y263 795 aa15.63■□□□□ 0.09
PRAME-214ENST00000543184 TRAF5O00463 557 aa15.63■□□□□ 0.09
PRAME-214ENST00000543184 FLT3P36888 993 aa15.63■□□□□ 0.09
PRAME-214ENST00000543184 NONOQ15233 471 aaKnown RBP eCLIP15.63■□□□□ 0.09
PRAME-214ENST00000543184 ASTE1Q2TB18 679 aaPredicted RBP15.63■□□□□ 0.09
PRAME-214ENST00000543184 ZNF473Q8WTR7 871 aaKnown RBP15.63■□□□□ 0.09
PRAME-214ENST00000543184 NOL4O94818 638 aa15.62■□□□□ 0.09
PRAME-214ENST00000543184 ACTN1P12814 892 aa15.62■□□□□ 0.09
PRAME-214ENST00000543184 KIAA0753Q2KHM9 967 aa15.62■□□□□ 0.09
PRAME-214ENST00000543184 ALS2CLQ60I27 953 aa15.62■□□□□ 0.09
PRAME-214ENST00000543184 IFT20Q8IY31 132 aa15.62■□□□□ 0.09
PRAME-214ENST00000543184 DDX12PQ92771 950 aa15.62■□□□□ 0.09
PRAME-214ENST00000543184 CALML4Q96GE6 196 aa15.62■□□□□ 0.09
PRAME-214ENST00000543184 KIAA0754O94854 1291 aa15.62■□□□□ 0.09
PRAME-214ENST00000543184 LDHBP07195 334 aaKnown RBP15.62■□□□□ 0.09
PRAME-214ENST00000543184 CDK17Q00537 523 aa15.62■□□□□ 0.09
PRAME-214ENST00000543184 CCDC40Q4G0X9 1142 aa15.62■□□□□ 0.09
PRAME-214ENST00000543184 NEK8Q86SG6 692 aa15.62■□□□□ 0.09
PRAME-214ENST00000543184 ZNF444Q8N0Y2 327 aaPredicted RBP15.62■□□□□ 0.09
PRAME-214ENST00000543184 CDK5RAP3Q96JB5 506 aa15.62■□□□□ 0.09
PRAME-214ENST00000543184 CCT8L2Q96SF2 557 aa15.62■□□□□ 0.09
PRAME-214ENST00000543184 COA1Q9GZY4 146 aa15.62■□□□□ 0.09
PRAME-214ENST00000543184 NEUROG2Q9H2A3 272 aa15.62■□□□□ 0.09
PRAME-214ENST00000543184 SLURP2P0DP57 97 aa15.61■□□□□ 0.09
PRAME-214ENST00000543184 HNRNPH3P31942 346 aaKnown RBP15.61■□□□□ 0.09
PRAME-214ENST00000543184 SKOR1P84550 965 aa15.61■□□□□ 0.09
PRAME-214ENST00000543184 FIGNQ5HY92 759 aa15.61■□□□□ 0.09
PRAME-214ENST00000543184 FAM83BQ5T0W9 1011 aa15.61■□□□□ 0.09
PRAME-214ENST00000543184 GBP6Q6ZN66 633 aa15.61■□□□□ 0.09
PRAME-214ENST00000543184 LRRC55Q6ZSA7 311 aa15.61■□□□□ 0.09
PRAME-214ENST00000543184 JDP2Q8WYK2 163 aa15.61■□□□□ 0.09
PRAME-214ENST00000543184 CAVIN3Q969G5 261 aa15.61■□□□□ 0.09
PRAME-214ENST00000543184 ZHX3Q9H4I2 956 aa15.61■□□□□ 0.09
PRAME-214ENST00000543184 GDF3Q9NR23 364 aa15.61■□□□□ 0.09
PRAME-214ENST00000543184 ARPP21Q9UBL0 812 aaPredicted RBP15.61■□□□□ 0.09
PRAME-214ENST00000543184 DCDC2CA8MYV0 355 aa15.61■□□□□ 0.09
PRAME-214ENST00000543184 KCNK3O14649 394 aa15.61■□□□□ 0.09
PRAME-214ENST00000543184 FNTAP49354 379 aa15.61■□□□□ 0.09
PRAME-214ENST00000543184 ACTN3Q08043 901 aaPredicted RBP15.61■□□□□ 0.09
PRAME-214ENST00000543184 C12orf60Q5U649 245 aa15.61■□□□□ 0.09
PRAME-214ENST00000543184 SUGP1Q8IWZ8 645 aaKnown RBP15.61■□□□□ 0.09
PRAME-214ENST00000543184 LARP4BQ92615 738 aaKnown RBP15.61■□□□□ 0.09
PRAME-214ENST00000543184 ATP8A2Q9NTI2 1148 aa15.61■□□□□ 0.09
PRAME-214ENST00000543184 MEFVO15553 781 aaPredicted RBP15.6■□□□□ 0.09
PRAME-214ENST00000543184 IL1R1P14778 569 aa15.6■□□□□ 0.09
PRAME-214ENST00000543184 PRLRP16471 622 aa15.6■□□□□ 0.09
PRAME-214ENST00000543184 ZNF572Q7Z3I7 529 aaPredicted RBP15.6■□□□□ 0.09
PRAME-214ENST00000543184 NIM1KQ8IY84 436 aa15.6■□□□□ 0.09
PRAME-214ENST00000543184 SH3GLB2Q9NR46 395 aa15.6■□□□□ 0.09
PRAME-214ENST00000543184 EPB41P11171 864 aaKnown RBP15.6■□□□□ 0.09
PRAME-214ENST00000543184 ERVK-9P63128 1117 aa15.6■□□□□ 0.09
PRAME-214ENST00000543184 CXCL9Q07325 125 aa15.6■□□□□ 0.09
PRAME-214ENST00000543184 PTGISQ16647 500 aa15.6■□□□□ 0.09
PRAME-214ENST00000543184 UBE2SQ16763 222 aa15.6■□□□□ 0.09
PRAME-214ENST00000543184 QPCTQ16769 361 aa15.6■□□□□ 0.09
PRAME-214ENST00000543184 NLRP14Q86W24 1093 aa15.6■□□□□ 0.09
PRAME-214ENST00000543184 SNX29Q8TEQ0 813 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms