RNA–Protein interactions for RNA: ENST00000543153.1

RFC5-209, Transcript of replication factor C subunit 5, humanhuman

TSL 5

Gene RFC5, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-209ENST00000543153 CTSHP09668 335 aa12.19□□□□□ -0.46
RFC5-209ENST00000543153 RGS2P41220 211 aa12.19□□□□□ -0.46
RFC5-209ENST00000543153 USP14P54578 494 aa12.19□□□□□ -0.46
RFC5-209ENST00000543153 CCNA1P78396 465 aa12.19□□□□□ -0.46
RFC5-209ENST00000543153 IKBKEQ14164 716 aa12.19□□□□□ -0.46
RFC5-209ENST00000543153 ABCB5Q2M3G0 1257 aa12.19□□□□□ -0.46
RFC5-209ENST00000543153 PLEKHH3Q7Z736 793 aa12.19□□□□□ -0.46
RFC5-209ENST00000543153 CEP44Q9C0F1 390 aa12.19□□□□□ -0.46
RFC5-209ENST00000543153 C11orf49Q9H6J7 331 aa12.19□□□□□ -0.46
RFC5-209ENST00000543153 STAP2Q9UGK3 403 aa12.19□□□□□ -0.46
RFC5-209ENST00000543153 GJD2Q9UKL4 321 aa12.19□□□□□ -0.46
RFC5-209ENST00000543153 NOP58Q9Y2X3 529 aaKnown RBP12.19□□□□□ -0.46
RFC5-209ENST00000543153 A0A1W2PPC1 479 aa12.18□□□□□ -0.46
RFC5-209ENST00000543153 H3BRJ5 948 aa12.18□□□□□ -0.46
RFC5-209ENST00000543153 RECKO95980 971 aa12.18□□□□□ -0.46
RFC5-209ENST00000543153 RLBP1P12271 317 aa12.18□□□□□ -0.46
RFC5-209ENST00000543153 SYN1P17600 705 aa12.18□□□□□ -0.46
RFC5-209ENST00000543153 ST13P50502 369 aaKnown RBP12.18□□□□□ -0.46
RFC5-209ENST00000543153 CERKLQ49MI3 558 aaPredicted RBP12.18□□□□□ -0.46
RFC5-209ENST00000543153 HSP90AB4PQ58FF6 505 aa12.18□□□□□ -0.46
RFC5-209ENST00000543153 CEP85Q6P2H3 762 aa12.18□□□□□ -0.46
RFC5-209ENST00000543153 GPR142Q7Z601 462 aa12.18□□□□□ -0.46
RFC5-209ENST00000543153 METTL16Q86W50 562 aaKnown RBP12.18□□□□□ -0.46
RFC5-209ENST00000543153 DNAJC2Q99543 621 aaKnown RBP12.18□□□□□ -0.46
RFC5-209ENST00000543153 APBA2Q99767 749 aa12.18□□□□□ -0.46
RFC5-209ENST00000543153 PORCNQ9H237 461 aa12.18□□□□□ -0.46
RFC5-209ENST00000543153 IL1RAPL2Q9NP60 686 aa12.18□□□□□ -0.46
RFC5-209ENST00000543153 SIPA1L1O43166 1804 aa12.17□□□□□ -0.46
RFC5-209ENST00000543153 SCAMP3O14828 347 aaKnown RBP12.17□□□□□ -0.46
RFC5-209ENST00000543153 EIF4EBP3O60516 100 aaPredicted RBP12.17□□□□□ -0.46
RFC5-209ENST00000543153 ARL4DP49703 201 aa12.17□□□□□ -0.46
RFC5-209ENST00000543153 PCDH1Q08174 1060 aa12.17□□□□□ -0.46
RFC5-209ENST00000543153 TTF1Q15361 905 aaPredicted RBP12.17□□□□□ -0.46
RFC5-209ENST00000543153 VN1R5Q7Z5H4 357 aa12.17□□□□□ -0.46
RFC5-209ENST00000543153 CRNKL1Q9BZJ0 848 aaKnown RBP12.17□□□□□ -0.46
RFC5-209ENST00000543153 ANTXR1Q9H6X2 564 aa12.17□□□□□ -0.46
RFC5-209ENST00000543153 RBPJLQ9UBG7 517 aa12.17□□□□□ -0.46
RFC5-209ENST00000543153 MKL2Q9ULH7 1088 aa12.17□□□□□ -0.46
RFC5-209ENST00000543153 SPDYE3A6NKU9 549 aa12.16□□□□□ -0.46
RFC5-209ENST00000543153 IFIT2P09913 472 aaKnown RBP12.16□□□□□ -0.46
RFC5-209ENST00000543153 NID1P14543 1247 aa12.16□□□□□ -0.46
RFC5-209ENST00000543153 VCAM1P19320 739 aa12.16□□□□□ -0.46
RFC5-209ENST00000543153 EPHA1P21709 976 aa12.16□□□□□ -0.46
RFC5-209ENST00000543153 CNGA1P29973 690 aa12.16□□□□□ -0.46
RFC5-209ENST00000543153 CDC25BP30305 580 aa12.16□□□□□ -0.46
RFC5-209ENST00000543153 CACNB2Q08289 660 aaPredicted RBP12.16□□□□□ -0.46
RFC5-209ENST00000543153 CCL14Q16627 93 aa12.16□□□□□ -0.46
RFC5-209ENST00000543153 SLC9C2Q5TAH2 1124 aa12.16□□□□□ -0.46
RFC5-209ENST00000543153 MFSD14CQ5VZR4 134 aa12.16□□□□□ -0.46
RFC5-209ENST00000543153 DMRTC2Q8IXT2 367 aaPredicted RBP12.16□□□□□ -0.46
RFC5-209ENST00000543153 CLASRPQ8N2M8 674 aaKnown RBP12.16□□□□□ -0.46
RFC5-209ENST00000543153 PANK1Q8TE04 598 aa12.16□□□□□ -0.46
RFC5-209ENST00000543153 TANGO6Q9C0B7 1094 aa12.16□□□□□ -0.46
RFC5-209ENST00000543153 MCM9Q9NXL9 1143 aa12.16□□□□□ -0.46
RFC5-209ENST00000543153 RABGAP1Q9Y3P9 1069 aa12.16□□□□□ -0.46
RFC5-209ENST00000543153 HMMRO75330 724 aa12.15□□□□□ -0.46
RFC5-209ENST00000543153 CCND3P30281 292 aaPredicted RBP12.15□□□□□ -0.46
RFC5-209ENST00000543153 PPP2R3AQ06190 1150 aa12.15□□□□□ -0.46
RFC5-209ENST00000543153 MAP3K21Q5TCX8 1036 aa12.15□□□□□ -0.46
RFC5-209ENST00000543153 MEI1Q5TIA1 1274 aa12.15□□□□□ -0.46
RFC5-209ENST00000543153 TATDN1Q6P1N9 297 aa12.15□□□□□ -0.46
RFC5-209ENST00000543153 TMED8Q6PL24 325 aaPredicted RBP12.15□□□□□ -0.46
RFC5-209ENST00000543153 ADAMTSL4Q6UY14 1074 aa12.15□□□□□ -0.46
RFC5-209ENST00000543153 MAP4K3Q8IVH8 894 aa12.15□□□□□ -0.46
RFC5-209ENST00000543153 WNT8BQ93098 351 aa12.15□□□□□ -0.46
RFC5-209ENST00000543153 KIAA1683Q9H0B3 1180 aa12.15□□□□□ -0.46
RFC5-209ENST00000543153 PRO3102Q9H379 93 aa12.15□□□□□ -0.46
RFC5-209ENST00000543153 RPAP3Q9H6T3 665 aaPredicted RBP12.15□□□□□ -0.46
RFC5-209ENST00000543153 GPN3Q9UHW5 284 aaPredicted RBP12.15□□□□□ -0.46
RFC5-209ENST00000543153 OGDHLQ9ULD0 1010 aa12.15□□□□□ -0.46
RFC5-209ENST00000543153 RANBP2P49792 3224 aaKnown RBP12.15□□□□□ -0.47
RFC5-209ENST00000543153 LINC01387J3KSC0 135 aa12.14□□□□□ -0.47
RFC5-209ENST00000543153 GOLIM4O00461 696 aa12.14□□□□□ -0.47
RFC5-209ENST00000543153 GNB5O14775 395 aa12.14□□□□□ -0.47
RFC5-209ENST00000543153 PDE6AP16499 860 aa12.14□□□□□ -0.47
RFC5-209ENST00000543153 PLCD1P51178 756 aa12.14□□□□□ -0.47
RFC5-209ENST00000543153 CCDC85BQ15834 202 aaPredicted RBP12.14□□□□□ -0.47
RFC5-209ENST00000543153 AMOTL1Q8IY63 956 aa12.14□□□□□ -0.47
RFC5-209ENST00000543153 BEND7Q8N7W2 519 aaPredicted RBP12.14□□□□□ -0.47
RFC5-209ENST00000543153 ACER1Q8TDN7 264 aa12.14□□□□□ -0.47
RFC5-209ENST00000543153 KIF1BPQ96EK5 621 aa12.14□□□□□ -0.47
RFC5-209ENST00000543153 EDC3Q96F86 508 aaKnown RBP12.14□□□□□ -0.47
RFC5-209ENST00000543153 C12orf42Q96LP6 360 aa12.14□□□□□ -0.47
RFC5-209ENST00000543153 SRA1Q9HD15 236 aaKnown RBP12.14□□□□□ -0.47
RFC5-209ENST00000543153 METTL5Q9NRN9 209 aaKnown RBP12.14□□□□□ -0.47
RFC5-209ENST00000543153 FOCADQ5VW36 1801 aa12.14□□□□□ -0.47
RFC5-209ENST00000543153 ZNF532Q9HCE3 1301 aa12.13□□□□□ -0.47
RFC5-209ENST00000543153 SLC15A5A6NIM6 579 aa12.13□□□□□ -0.47
RFC5-209ENST00000543153 SOX1O00570 391 aaPredicted RBP12.13□□□□□ -0.47
RFC5-209ENST00000543153 B3GALT4O96024 378 aa12.13□□□□□ -0.47
RFC5-209ENST00000543153 ESRRAP11474 423 aaPredicted RBP12.13□□□□□ -0.47
RFC5-209ENST00000543153 HOXB4P17483 251 aaPredicted RBP12.13□□□□□ -0.47
RFC5-209ENST00000543153 SHMT1P34896 483 aa12.13□□□□□ -0.47
RFC5-209ENST00000543153 MAGEA10P43363 369 aaPredicted RBP12.13□□□□□ -0.47
RFC5-209ENST00000543153 PLS1Q14651 629 aa12.13□□□□□ -0.47
RFC5-209ENST00000543153 SEPT2Q15019 361 aa12.13□□□□□ -0.47
RFC5-209ENST00000543153 CATSPERGQ6ZRH7 1159 aa12.13□□□□□ -0.47
RFC5-209ENST00000543153 DPP9Q86TI2 863 aa12.13□□□□□ -0.47
RFC5-209ENST00000543153 DTWD1Q8N5C7 304 aa12.13□□□□□ -0.47
RFC5-209ENST00000543153 SDR42E1Q8WUS8 393 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms