RNA–Protein interactions for RNA: ENST00000542996.6

CALU-206, Transcript of calumenin, humanhuman

TSL 1 (best) BASIC

Gene CALU, Length 4,225 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALU-206ENST00000542996 C7orf43Q8WVR3 580 aa11.76□□□□□ -0.53
CALU-206ENST00000542996 CNOT8Q9UFF9 292 aaKnown RBP11.76□□□□□ -0.53
CALU-206ENST00000542996 USP21Q9UK80 565 aa11.76□□□□□ -0.53
CALU-206ENST00000542996 KIAA1024Q9UPX6 916 aa11.76□□□□□ -0.53
CALU-206ENST00000542996 ZNF652Q9Y2D9 606 aa11.76□□□□□ -0.53
CALU-206ENST00000542996 TCRBV7S2A1N4TA0A589 114 aa11.76□□□□□ -0.53
CALU-206ENST00000542996 SHOX2O60902 331 aaPredicted RBP11.76□□□□□ -0.53
CALU-206ENST00000542996 NONOQ15233 471 aaKnown RBP eCLIP11.76□□□□□ -0.53
CALU-206ENST00000542996 MSL1Q68DK7 614 aa11.76□□□□□ -0.53
CALU-206ENST00000542996 PDXDC1Q6P996 788 aa11.76□□□□□ -0.53
CALU-206ENST00000542996 REXO1Q8N1G1 1221 aaKnown RBP11.76□□□□□ -0.53
CALU-206ENST00000542996 CASKIN2Q8WXE0 1202 aa11.76□□□□□ -0.53
CALU-206ENST00000542996 KAT5Q92993 513 aa11.76□□□□□ -0.53
CALU-206ENST00000542996 GJD4Q96KN9 370 aaPredicted RBP11.76□□□□□ -0.53
CALU-206ENST00000542996 ADAMTS1Q9UHI8 967 aa11.76□□□□□ -0.53
CALU-206ENST00000542996 USP20Q9Y2K6 914 aa11.76□□□□□ -0.53
CALU-206ENST00000542996 LEMD3Q9Y2U8 911 aa11.76□□□□□ -0.53
CALU-206ENST00000542996 SAR1BQ9Y6B6 198 aa11.76□□□□□ -0.53
CALU-206ENST00000542996 PEX10O60683 326 aa11.76□□□□□ -0.53
CALU-206ENST00000542996 MARCKSL1P49006 195 aa11.76□□□□□ -0.53
CALU-206ENST00000542996 DNA2P51530 1060 aa11.76□□□□□ -0.53
CALU-206ENST00000542996 ERVK-9P63128 1117 aa11.76□□□□□ -0.53
CALU-206ENST00000542996 ZSCAN26Q16670 478 aa11.76□□□□□ -0.53
CALU-206ENST00000542996 UNC13DQ70J99 1090 aa11.76□□□□□ -0.53
CALU-206ENST00000542996 IL31RAQ8NI17 732 aa11.76□□□□□ -0.53
CALU-206ENST00000542996 RIC8AQ9NPQ8 531 aa11.76□□□□□ -0.53
CALU-206ENST00000542996 LAMA1P25391 3075 aa11.75□□□□□ -0.53
CALU-206ENST00000542996 FIGNQ5HY92 759 aa11.75□□□□□ -0.53
CALU-206ENST00000542996 FAM83BQ5T0W9 1011 aa11.75□□□□□ -0.53
CALU-206ENST00000542996 DAB2IPQ5VWQ8 1189 aa11.75□□□□□ -0.53
CALU-206ENST00000542996 LLGL2Q6P1M3 1020 aa11.75□□□□□ -0.53
CALU-206ENST00000542996 DHTKD1Q96HY7 919 aaPredicted RBP11.75□□□□□ -0.53
CALU-206ENST00000542996 REEP2Q9BRK0 252 aa11.75□□□□□ -0.53
CALU-206ENST00000542996 TTF2Q9UNY4 1162 aaKnown RBP11.75□□□□□ -0.53
CALU-206ENST00000542996 PJA2O43164 708 aa11.75□□□□□ -0.53
CALU-206ENST00000542996 VAV2P52735 878 aa11.75□□□□□ -0.53
CALU-206ENST00000542996 JAM2P57087 298 aa11.75□□□□□ -0.53
CALU-206ENST00000542996 AKAP17AQ02040 695 aaKnown RBP11.75□□□□□ -0.53
CALU-206ENST00000542996 CALCRLQ16602 461 aa11.75□□□□□ -0.53
CALU-206ENST00000542996 TRAPPC3LQ5T215 181 aa11.75□□□□□ -0.53
CALU-206ENST00000542996 PIGOQ8TEQ8 1089 aa11.75□□□□□ -0.53
CALU-206ENST00000542996 PRMT6Q96LA8 375 aaPredicted RBP11.75□□□□□ -0.53
CALU-206ENST00000542996 MATR3P43243 847 aaKnown RBP eCLIP11.75□□□□□ -0.53
CALU-206ENST00000542996 DNM2P50570 870 aa11.75□□□□□ -0.53
CALU-206ENST00000542996 MAPK7Q13164 816 aa11.75□□□□□ -0.53
CALU-206ENST00000542996 TBC1D10BQ4KMP7 808 aaPredicted RBP11.75□□□□□ -0.53
CALU-206ENST00000542996 KCNV1Q6PIU1 500 aa11.75□□□□□ -0.53
CALU-206ENST00000542996 B3GNT9Q6UX72 402 aa11.75□□□□□ -0.53
CALU-206ENST00000542996 CDCA7Q9BWT1 371 aaPredicted RBP11.75□□□□□ -0.53
CALU-206ENST00000542996 ANKRD2Q9GZV1 360 aa11.75□□□□□ -0.53
CALU-206ENST00000542996 A0A1W2PQJ5 194 aa11.75□□□□□ -0.53
CALU-206ENST00000542996 MSH4O15457 936 aa11.75□□□□□ -0.53
CALU-206ENST00000542996 PALMO75781 387 aa11.75□□□□□ -0.53
CALU-206ENST00000542996 CHRNA5P30532 468 aa11.75□□□□□ -0.53
CALU-206ENST00000542996 CYP4A11Q02928 519 aa11.75□□□□□ -0.53
CALU-206ENST00000542996 ARID5AQ03989 594 aa11.75□□□□□ -0.53
CALU-206ENST00000542996 SEPT12Q8IYM1 358 aa11.75□□□□□ -0.53
CALU-206ENST00000542996 FAM133AQ8N9E0 248 aa11.75□□□□□ -0.53
CALU-206ENST00000542996 WDR66Q8TBY9 1149 aa11.75□□□□□ -0.53
CALU-206ENST00000542996 ATP8B4Q8TF62 1192 aa11.75□□□□□ -0.53
CALU-206ENST00000542996 ZIM3Q96PE6 472 aa11.75□□□□□ -0.53
CALU-206ENST00000542996 FBXO28Q9NVF7 368 aa11.75□□□□□ -0.53
CALU-206ENST00000542996 STXBP5LQ9Y2K9 1186 aa11.75□□□□□ -0.53
CALU-206ENST00000542996 PCDHA3Q9Y5H8 950 aa11.75□□□□□ -0.53
CALU-206ENST00000542996 CNTNAP1P78357 1384 aa11.74□□□□□ -0.53
CALU-206ENST00000542996 ESYT2A0FGR8 921 aa11.74□□□□□ -0.53
CALU-206ENST00000542996 DDX3XO00571 662 aaKnown RBP eCLIP11.74□□□□□ -0.536e-20■■■■□ 21.3
CALU-206ENST00000542996 TNNI2P48788 182 aa11.74□□□□□ -0.53
CALU-206ENST00000542996 ENOX2Q16206 610 aaKnown RBP11.74□□□□□ -0.53
CALU-206ENST00000542996 ARHGEF26Q96DR7 871 aa11.74□□□□□ -0.53
CALU-206ENST00000542996 HAUS4Q9H6D7 363 aa11.74□□□□□ -0.53
CALU-206ENST00000542996 KIF5CO60282 957 aa11.74□□□□□ -0.53
CALU-206ENST00000542996 TRIM21P19474 475 aaKnown RBP11.74□□□□□ -0.53
CALU-206ENST00000542996 LMAN1P49257 510 aa11.74□□□□□ -0.53
CALU-206ENST00000542996 CDK17Q00537 523 aa11.74□□□□□ -0.53
CALU-206ENST00000542996 MUM1L1Q5H9M0 696 aa11.74□□□□□ -0.53
CALU-206ENST00000542996 PPP4R3AQ6IN85 833 aa11.74□□□□□ -0.53
CALU-206ENST00000542996 TATDN1Q6P1N9 297 aa11.74□□□□□ -0.53
CALU-206ENST00000542996 KIAA0825Q8IV33 1275 aa11.74□□□□□ -0.53
CALU-206ENST00000542996 RGPD3A6NKT7 1758 aaPredicted RBP11.74□□□□□ -0.53
CALU-206ENST00000542996 RGPD4Q7Z3J3 1758 aa11.74□□□□□ -0.53
CALU-206ENST00000542996 ASTN2O75129 1339 aaPredicted RBP11.74□□□□□ -0.53
CALU-206ENST00000542996 PON1P27169 355 aa11.74□□□□□ -0.53
CALU-206ENST00000542996 STIM1Q13586 685 aa11.74□□□□□ -0.53
CALU-206ENST00000542996 BRD3Q15059 726 aa11.74□□□□□ -0.53
CALU-206ENST00000542996 ZNF444Q8N0Y2 327 aaPredicted RBP11.74□□□□□ -0.53
CALU-206ENST00000542996 SMARCC1Q92922 1105 aaPredicted RBP11.74□□□□□ -0.53
CALU-206ENST00000542996 ARID2Q68CP9 1835 aa11.73□□□□□ -0.53
CALU-206ENST00000542996 TNS1Q9HBL0 1735 aaKnown RBP11.73□□□□□ -0.53
CALU-206ENST00000542996 O00370 1275 aa11.73□□□□□ -0.53
CALU-206ENST00000542996 PLSCR1O15162 318 aa11.73□□□□□ -0.53
CALU-206ENST00000542996 DACT2Q5SW24 774 aa11.73□□□□□ -0.53
CALU-206ENST00000542996 KCTD16Q68DU8 428 aa11.73□□□□□ -0.53
CALU-206ENST00000542996 SRLQ86TD4 932 aa11.73□□□□□ -0.53
CALU-206ENST00000542996 GUF1Q8N442 669 aaKnown RBP11.73□□□□□ -0.53
CALU-206ENST00000542996 SLC30A5Q8TAD4 765 aa11.73□□□□□ -0.53
CALU-206ENST00000542996 SNX29Q8TEQ0 813 aa11.73□□□□□ -0.53
CALU-206ENST00000542996 SLC35C1Q96A29 364 aa11.73□□□□□ -0.53
CALU-206ENST00000542996 CCDC51Q96ER9 411 aa11.73□□□□□ -0.53
CALU-206ENST00000542996 CTAGE1Q96RT6 745 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms