RNA–Protein interactions for RNA: ENST00000542661.1

DDX11-221, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-221ENST00000542661 ACTR2P61160 394 aa16.06■□□□□ 0.16
DDX11-221ENST00000542661 KRT76Q01546 638 aa16.06■□□□□ 0.16
DDX11-221ENST00000542661 ZNF746Q6NUN9 644 aaPredicted RBP16.06■□□□□ 0.16
DDX11-221ENST00000542661 SMARCAD1Q9H4L7 1026 aa16.06■□□□□ 0.16
DDX11-221ENST00000542661 AZI2Q9H6S1 392 aa16.06■□□□□ 0.16
DDX11-221ENST00000542661 PRDM5Q9NQX1 630 aaPredicted RBP16.06■□□□□ 0.16
DDX11-221ENST00000542661 PDLIM7Q9NR12 457 aa16.06■□□□□ 0.16
DDX11-221ENST00000542661 ZMYND8Q9ULU4 1186 aaPredicted RBP16.06■□□□□ 0.16
DDX11-221ENST00000542661 GSTTP1A0A1W2PQM5 241 aa16.05■□□□□ 0.16
DDX11-221ENST00000542661 K7ELQ4 463 aaPredicted RBP16.05■□□□□ 0.16
DDX11-221ENST00000542661 CCNT1O60563 726 aaKnown RBP16.05■□□□□ 0.16
DDX11-221ENST00000542661 TDP2O95551 362 aa16.05■□□□□ 0.16
DDX11-221ENST00000542661 UTP14CQ5TAP6 766 aaKnown RBP16.05■□□□□ 0.16
DDX11-221ENST00000542661 SMAP1Q8IYB5 467 aaPredicted RBP16.05■□□□□ 0.16
DDX11-221ENST00000542661 GLG1Q92896 1179 aa16.05■□□□□ 0.16
DDX11-221ENST00000542661 SLC5A5Q92911 643 aa16.05■□□□□ 0.16
DDX11-221ENST00000542661 INTS4Q96HW7 963 aaKnown RBP16.05■□□□□ 0.16
DDX11-221ENST00000542661 LBHD1Q9BQE6 289 aaPredicted RBP16.05■□□□□ 0.16
DDX11-221ENST00000542661 ERAP1Q9NZ08 941 aa16.05■□□□□ 0.16
DDX11-221ENST00000542661 RANBP2P49792 3224 aaKnown RBP16.04■□□□□ 0.16
DDX11-221ENST00000542661 EMSYQ7Z589 1322 aa16.04■□□□□ 0.16
DDX11-221ENST00000542661 H3BQV1 296 aa16.04■□□□□ 0.16
DDX11-221ENST00000542661 TBX3O15119 743 aa16.04■□□□□ 0.16
DDX11-221ENST00000542661 GAS7O60861 476 aa16.04■□□□□ 0.16
DDX11-221ENST00000542661 LGR5O75473 907 aa16.04■□□□□ 0.16
DDX11-221ENST00000542661 ATG7O95352 703 aa16.04■□□□□ 0.16
DDX11-221ENST00000542661 SYN1P17600 705 aa16.04■□□□□ 0.16
DDX11-221ENST00000542661 SLC26A2P50443 739 aa16.04■□□□□ 0.16
DDX11-221ENST00000542661 EARS2Q5JPH6 523 aaKnown RBP16.04■□□□□ 0.16
DDX11-221ENST00000542661 LRCH2Q5VUJ6 765 aa16.04■□□□□ 0.16
DDX11-221ENST00000542661 NOSTRINQ8IVI9 506 aa16.04■□□□□ 0.16
DDX11-221ENST00000542661 HSCBQ8IWL3 235 aa16.04■□□□□ 0.16
DDX11-221ENST00000542661 TNPO1Q92973 898 aaKnown RBP16.04■□□□□ 0.16
DDX11-221ENST00000542661 FAM20AQ96MK3 541 aa16.04■□□□□ 0.16
DDX11-221ENST00000542661 TRPV6Q9H1D0 765 aa16.04■□□□□ 0.16
DDX11-221ENST00000542661 GTF2IRD1Q9UHL9 959 aa16.04■□□□□ 0.16
DDX11-221ENST00000542661 TBX21Q9UL17 535 aa16.04■□□□□ 0.16
DDX11-221ENST00000542661 NOD1Q9Y239 953 aa16.04■□□□□ 0.16
DDX11-221ENST00000542661 TRIM43BA6NCK2 446 aa16.03■□□□□ 0.16
DDX11-221ENST00000542661 FAM205CA6NFA0 338 aa16.03■□□□□ 0.16
DDX11-221ENST00000542661 DDX39AO00148 427 aaKnown RBP16.03■□□□□ 0.16
DDX11-221ENST00000542661 MARCH6O60337 910 aa16.03■□□□□ 0.16
DDX11-221ENST00000542661 B4GALT4O60513 344 aa16.03■□□□□ 0.16
DDX11-221ENST00000542661 CCNE2O96020 404 aa16.03■□□□□ 0.16
DDX11-221ENST00000542661 GNAT1P11488 350 aa16.03■□□□□ 0.16
DDX11-221ENST00000542661 RAG1P15918 1043 aa16.03■□□□□ 0.16
DDX11-221ENST00000542661 PDCP20941 246 aa16.03■□□□□ 0.16
DDX11-221ENST00000542661 U2AF2P26368 475 aaKnown RBP eCLIP16.03■□□□□ 0.16
DDX11-221ENST00000542661 FAM160B1Q5W0V3 765 aa16.03■□□□□ 0.16
DDX11-221ENST00000542661 MIS18BP1Q6P0N0 1132 aa16.03■□□□□ 0.16
DDX11-221ENST00000542661 ABHD15Q6UXT9 468 aa16.03■□□□□ 0.16
DDX11-221ENST00000542661 PLPPR4Q7Z2D5 763 aa16.03■□□□□ 0.16
DDX11-221ENST00000542661 SH3RF1Q7Z6J0 888 aa16.03■□□□□ 0.16
DDX11-221ENST00000542661 ETNPPLQ8TBG4 499 aa16.03■□□□□ 0.16
DDX11-221ENST00000542661 TRIM43Q96BQ3 446 aaPredicted RBP16.03■□□□□ 0.16
DDX11-221ENST00000542661 TEKT3Q9BXF9 490 aa16.03■□□□□ 0.16
DDX11-221ENST00000542661 TRMT13Q9NUP7 481 aaKnown RBP16.03■□□□□ 0.16
DDX11-221ENST00000542661 HDAC6Q9UBN7 1215 aa16.03■□□□□ 0.16
DDX11-221ENST00000542661 TELO2Q9Y4R8 837 aa16.03■□□□□ 0.16
DDX11-221ENST00000542661 WDR64B1ANS9 1081 aa16.02■□□□□ 0.16
DDX11-221ENST00000542661 SLC37A4O43826 429 aa16.02■□□□□ 0.16
DDX11-221ENST00000542661 PSMD10O75832 226 aa16.02■□□□□ 0.16
DDX11-221ENST00000542661 BAG4O95429 457 aaKnown RBP16.02■□□□□ 0.16
DDX11-221ENST00000542661 TIMP1P01033 207 aa16.02■□□□□ 0.16
DDX11-221ENST00000542661 PSAPP07602 524 aa16.02■□□□□ 0.16
DDX11-221ENST00000542661 SMIM10L2AP0DMW4 78 aa16.02■□□□□ 0.16
DDX11-221ENST00000542661 SMIM10L2BP0DMW5 78 aa16.02■□□□□ 0.16
DDX11-221ENST00000542661 SFNP31947 248 aa16.02■□□□□ 0.16
DDX11-221ENST00000542661 TRAPPC10P48553 1259 aa16.02■□□□□ 0.16
DDX11-221ENST00000542661 STAT5BP51692 787 aa16.02■□□□□ 0.16
DDX11-221ENST00000542661 JAK3P52333 1124 aa16.02■□□□□ 0.16
DDX11-221ENST00000542661 ORC2Q13416 577 aaPredicted RBP16.02■□□□□ 0.16
DDX11-221ENST00000542661 PTGISQ16647 500 aa16.02■□□□□ 0.16
DDX11-221ENST00000542661 LARP1BQ659C4 914 aaKnown RBP16.02■□□□□ 0.16
DDX11-221ENST00000542661 TRIM50Q86XT4 487 aa16.02■□□□□ 0.16
DDX11-221ENST00000542661 SLFN12Q8IYM2 578 aa16.02■□□□□ 0.16
DDX11-221ENST00000542661 RDM1Q8NG50 284 aa16.02■□□□□ 0.16
DDX11-221ENST00000542661 UIMC1Q96RL1 719 aa16.02■□□□□ 0.16
DDX11-221ENST00000542661 KCNMB3Q9NPA1 279 aa16.02■□□□□ 0.16
DDX11-221ENST00000542661 NOL7Q9UMY1 257 aaKnown RBP16.02■□□□□ 0.16
DDX11-221ENST00000542661 SAMM50Q9Y512 469 aa16.02■□□□□ 0.16
DDX11-221ENST00000542661 PCDHA10Q9Y5I2 948 aa16.02■□□□□ 0.16
DDX11-221ENST00000542661 NRCAMQ92823 1304 aa16.01■□□□□ 0.15
DDX11-221ENST00000542661 IGKV6D-21A0A0A0MT36 114 aa16.01■□□□□ 0.15
DDX11-221ENST00000542661 BACH1O14867 736 aa16.01■□□□□ 0.15
DDX11-221ENST00000542661 MCTP1Q6DN14 999 aa16.01■□□□□ 0.15
DDX11-221ENST00000542661 GDF6Q6KF10 455 aaPredicted RBP16.01■□□□□ 0.15
DDX11-221ENST00000542661 CCDC155Q8N6L0 562 aa16.01■□□□□ 0.15
DDX11-221ENST00000542661 AFAP1L1Q8TED9 768 aa16.01■□□□□ 0.15
DDX11-221ENST00000542661 HIPK3Q9H422 1215 aa16.01■□□□□ 0.15
DDX11-221ENST00000542661 C17orf102A2RUQ5 167 aa16■□□□□ 0.15
DDX11-221ENST00000542661 NEMFO60524 1076 aa16■□□□□ 0.15
DDX11-221ENST00000542661 HOXC8P31273 242 aa16■□□□□ 0.15
DDX11-221ENST00000542661 MAGEA10P43363 369 aaPredicted RBP16■□□□□ 0.15
DDX11-221ENST00000542661 BFSP2Q13515 415 aa16■□□□□ 0.15
DDX11-221ENST00000542661 PPP1R13LQ8WUF5 828 aa16■□□□□ 0.15
DDX11-221ENST00000542661 PCYT2Q99447 389 aa16■□□□□ 0.15
DDX11-221ENST00000542661 GDF15Q99988 308 aa16■□□□□ 0.15
DDX11-221ENST00000542661 NOC4LQ9BVI4 516 aaKnown RBP16■□□□□ 0.15
DDX11-221ENST00000542661 RNPEPQ9H4A4 650 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms