RNA–Protein interactions for RNA: ENST00000542452.1

C2CD3-217, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 956 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-217ENST00000542452 JPH1Q9HDC5 661 aaPredicted RBP13.13□□□□□ -0.31
C2CD3-217ENST00000542452 KAT6AQ92794 2004 aa13.12□□□□□ -0.31
C2CD3-217ENST00000542452 H3BRB1 525 aa13.12□□□□□ -0.31
C2CD3-217ENST00000542452 DDX39AO00148 427 aaKnown RBP13.12□□□□□ -0.31
C2CD3-217ENST00000542452 MAFGO15525 162 aa13.12□□□□□ -0.31
C2CD3-217ENST00000542452 DHX15O43143 795 aaKnown RBP13.12□□□□□ -0.31
C2CD3-217ENST00000542452 CDKL5O76039 1030 aa13.12□□□□□ -0.31
C2CD3-217ENST00000542452 SUPT20HL2P0C7V6 817 aa13.12□□□□□ -0.31
C2CD3-217ENST00000542452 SMIM10L2AP0DMW4 78 aa13.12□□□□□ -0.31
C2CD3-217ENST00000542452 SMIM10L2BP0DMW5 78 aa13.12□□□□□ -0.31
C2CD3-217ENST00000542452 CIITAP33076 1130 aa13.12□□□□□ -0.31
C2CD3-217ENST00000542452 RBL2Q08999 1139 aa13.12□□□□□ -0.31
C2CD3-217ENST00000542452 GPNMBQ14956 572 aa13.12□□□□□ -0.31
C2CD3-217ENST00000542452 RASIP1Q5U651 963 aa13.12□□□□□ -0.31
C2CD3-217ENST00000542452 FAM109BQ6ICB4 259 aaPredicted RBP13.12□□□□□ -0.31
C2CD3-217ENST00000542452 TMEM199Q8N511 208 aa13.12□□□□□ -0.31
C2CD3-217ENST00000542452 C7orf31Q8N865 590 aa13.12□□□□□ -0.31
C2CD3-217ENST00000542452 GIMAP8Q8ND71 665 aaPredicted RBP13.12□□□□□ -0.31
C2CD3-217ENST00000542452 BICD2Q8TD16 824 aa13.12□□□□□ -0.31
C2CD3-217ENST00000542452 OXER1Q8TDS5 423 aa13.12□□□□□ -0.31
C2CD3-217ENST00000542452 TUT1Q9H6E5 874 aaKnown RBP13.12□□□□□ -0.31
C2CD3-217ENST00000542452 IL23AQ9NPF7 189 aa13.12□□□□□ -0.31
C2CD3-217ENST00000542452 ORC3Q9UBD5 711 aaPredicted RBP13.12□□□□□ -0.31
C2CD3-217ENST00000542452 SLC9A2Q9UBY0 812 aa13.12□□□□□ -0.31
C2CD3-217ENST00000542452 EMSYQ7Z589 1322 aa13.12□□□□□ -0.31
C2CD3-217ENST00000542452 FAM205CA6NFA0 338 aa13.11□□□□□ -0.31
C2CD3-217ENST00000542452 PITPNM1O00562 1244 aa13.11□□□□□ -0.31
C2CD3-217ENST00000542452 LGR5O75473 907 aa13.11□□□□□ -0.31
C2CD3-217ENST00000542452 TDP2O95551 362 aa13.11□□□□□ -0.31
C2CD3-217ENST00000542452 ZNF76P36508 570 aa13.11□□□□□ -0.31
C2CD3-217ENST00000542452 ACTR2P61160 394 aa13.11□□□□□ -0.31
C2CD3-217ENST00000542452 ADAM17P78536 824 aa13.11□□□□□ -0.31
C2CD3-217ENST00000542452 EARS2Q5JPH6 523 aaKnown RBP13.11□□□□□ -0.31
C2CD3-217ENST00000542452 ZNF365Q70YC5 407 aa13.11□□□□□ -0.31
C2CD3-217ENST00000542452 CCDC83Q8IWF9 413 aa13.11□□□□□ -0.31
C2CD3-217ENST00000542452 TBCKQ8TEA7 893 aa13.11□□□□□ -0.31
C2CD3-217ENST00000542452 SEPT1Q8WYJ6 367 aa13.11□□□□□ -0.31
C2CD3-217ENST00000542452 RNPC3Q96LT9 517 aaKnown RBP13.11□□□□□ -0.31
C2CD3-217ENST00000542452 RNPEPQ9H4A4 650 aa13.11□□□□□ -0.31
C2CD3-217ENST00000542452 CXXC1Q9P0U4 656 aaPredicted RBP13.11□□□□□ -0.31
C2CD3-217ENST00000542452 NOD1Q9Y239 953 aa13.11□□□□□ -0.31
C2CD3-217ENST00000542452 C17orf102A2RUQ5 167 aa13.1□□□□□ -0.31
C2CD3-217ENST00000542452 TREHO43280 583 aa13.1□□□□□ -0.31
C2CD3-217ENST00000542452 CD2BP2O95400 341 aaKnown RBP13.1□□□□□ -0.31
C2CD3-217ENST00000542452 IQCF3P0C7M6 154 aa13.1□□□□□ -0.31
C2CD3-217ENST00000542452 MARK3P27448 753 aa13.1□□□□□ -0.31
C2CD3-217ENST00000542452 FOSBP53539 338 aa13.1□□□□□ -0.31
C2CD3-217ENST00000542452 SETQ01105 290 aaPredicted RBP13.1□□□□□ -0.31
C2CD3-217ENST00000542452 PTK7Q13308 1070 aa13.1□□□□□ -0.31
C2CD3-217ENST00000542452 MBTPS1Q14703 1052 aa13.1□□□□□ -0.31
C2CD3-217ENST00000542452 TCTN1Q2MV58 587 aa13.1□□□□□ -0.31
C2CD3-217ENST00000542452 PRR16Q569H4 304 aa13.1□□□□□ -0.31
C2CD3-217ENST00000542452 MCTP2Q6DN12 878 aa13.1□□□□□ -0.31
C2CD3-217ENST00000542452 PSRC1Q6PGN9 363 aaPredicted RBP13.1□□□□□ -0.31
C2CD3-217ENST00000542452 Q7L0L9 218 aa13.1□□□□□ -0.31
C2CD3-217ENST00000542452 SERINC5Q86VE9 423 aa13.1□□□□□ -0.31
C2CD3-217ENST00000542452 FAM177A1Q8N128 213 aaPredicted RBP13.1□□□□□ -0.31
C2CD3-217ENST00000542452 CAGE1Q8TC20 777 aa13.1□□□□□ -0.31
C2CD3-217ENST00000542452 LMBR1Q8WVP7 490 aa13.1□□□□□ -0.31
C2CD3-217ENST00000542452 TNFRSF25Q93038 417 aa13.1□□□□□ -0.31
C2CD3-217ENST00000542452 GJA10Q969M2 543 aa13.1□□□□□ -0.31
C2CD3-217ENST00000542452 SDF4Q9BRK5 362 aa13.1□□□□□ -0.31
C2CD3-217ENST00000542452 SETD4Q9NVD3 440 aa13.1□□□□□ -0.31
C2CD3-217ENST00000542452 MYH9P35579 1960 aaKnown RBP13.1□□□□□ -0.31
C2CD3-217ENST00000542452 MICAL3Q7RTP6 2002 aa13.1□□□□□ -0.31
C2CD3-217ENST00000542452 IGKV6D-21A0A0A0MT36 114 aa13.09□□□□□ -0.31
C2CD3-217ENST00000542452 MSH4O15457 936 aa13.09□□□□□ -0.31
C2CD3-217ENST00000542452 ATG7O95352 703 aa13.09□□□□□ -0.31
C2CD3-217ENST00000542452 CKBP12277 381 aa13.09□□□□□ -0.31
C2CD3-217ENST00000542452 INF2Q27J81 1249 aa13.09□□□□□ -0.31
C2CD3-217ENST00000542452 RUFY4Q6ZNE9 571 aa13.09□□□□□ -0.31
C2CD3-217ENST00000542452 LRRC8DQ7L1W4 858 aa13.09□□□□□ -0.31
C2CD3-217ENST00000542452 DEFB128Q7Z7B8 93 aa13.09□□□□□ -0.31
C2CD3-217ENST00000542452 CCDC60Q8IWA6 550 aaPredicted RBP13.09□□□□□ -0.31
C2CD3-217ENST00000542452 AFAP1L1Q8TED9 768 aa13.09□□□□□ -0.31
C2CD3-217ENST00000542452 ZBTB10Q96DT7 871 aa13.09□□□□□ -0.31
C2CD3-217ENST00000542452 MBOAT7Q96N66 472 aa13.09□□□□□ -0.31
C2CD3-217ENST00000542452 ZNF577Q9BSK1 485 aa13.09□□□□□ -0.31
C2CD3-217ENST00000542452 OSBPL7Q9BZF2 842 aa13.09□□□□□ -0.31
C2CD3-217ENST00000542452 ZNF215Q9UL58 517 aaPredicted RBP13.09□□□□□ -0.31
C2CD3-217ENST00000542452 LIMCH1Q9UPQ0 1083 aa13.09□□□□□ -0.31
C2CD3-217ENST00000542452 LOXHD1Q8IVV2 1947 aa13.09□□□□□ -0.31
C2CD3-217ENST00000542452 GRXCR1A8MXD5 290 aa13.08□□□□□ -0.32
C2CD3-217ENST00000542452 IPO5O00410 1097 aaKnown RBP13.08□□□□□ -0.32
C2CD3-217ENST00000542452 SLC37A4O43826 429 aa13.08□□□□□ -0.32
C2CD3-217ENST00000542452 NBNO60934 754 aa13.08□□□□□ -0.32
C2CD3-217ENST00000542452 SELPP16109 830 aa13.08□□□□□ -0.32
C2CD3-217ENST00000542452 NR5A1Q13285 461 aa13.08□□□□□ -0.32
C2CD3-217ENST00000542452 BFSP2Q13515 415 aa13.08□□□□□ -0.32
C2CD3-217ENST00000542452 PLCB4Q15147 1175 aa13.08□□□□□ -0.32
C2CD3-217ENST00000542452 ZNF618Q5T7W0 954 aa13.08□□□□□ -0.32
C2CD3-217ENST00000542452 GALNT17Q6IS24 598 aa13.08□□□□□ -0.32
C2CD3-217ENST00000542452 ABHD15Q6UXT9 468 aa13.08□□□□□ -0.32
C2CD3-217ENST00000542452 HERVK_113Q902F9 699 aa13.08□□□□□ -0.32
C2CD3-217ENST00000542452 ATP6V0A1Q93050 837 aa13.08□□□□□ -0.32
C2CD3-217ENST00000542452 TBC1D32Q96NH3 1257 aa13.08□□□□□ -0.32
C2CD3-217ENST00000542452 LAMA2P24043 3122 aaKnown RBP13.07□□□□□ -0.32
C2CD3-217ENST00000542452 CYP3A7-CYP3A51PA0A087WV96 503 aa13.07□□□□□ -0.32
C2CD3-217ENST00000542452 WNT7AO00755 349 aa13.07□□□□□ -0.32
C2CD3-217ENST00000542452 ATP4AP20648 1035 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms