RNA–Protein interactions for RNA: ENST00000542362.1

POLE-218, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 4

Gene POLE, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-218	ENST00000542362	DCDC2C	A8MYV0	355 aa		10.35	□□□□□ -0.75
POLE-218	ENST00000542362	BTBD18	B2RXH4	712 aa		10.35	□□□□□ -0.75
POLE-218	ENST00000542362	NOP56	O00567	594 aa	Known RBP	10.35	□□□□□ -0.75
POLE-218	ENST00000542362	MSH4	O15457	936 aa		10.35	□□□□□ -0.75
POLE-218	ENST00000542362	STAM2	O75886	525 aa		10.35	□□□□□ -0.75
POLE-218	ENST00000542362	FOS	P01100	380 aa	Predicted RBP	10.35	□□□□□ -0.75
POLE-218	ENST00000542362	CYP3A4	P08684	503 aa		10.35	□□□□□ -0.75
POLE-218	ENST00000542362	RAG1	P15918	1043 aa		10.35	□□□□□ -0.75
POLE-218	ENST00000542362	GNA11	P29992	359 aa		10.35	□□□□□ -0.75
POLE-218	ENST00000542362	NEDD9	Q14511	834 aa		10.35	□□□□□ -0.75
POLE-218	ENST00000542362	RABEP1	Q15276	862 aa		10.35	□□□□□ -0.75
POLE-218	ENST00000542362	SHH	Q15465	462 aa		10.35	□□□□□ -0.75
POLE-218	ENST00000542362	CPLX2	Q6PUV4	134 aa	Known RBP	10.35	□□□□□ -0.75
POLE-218	ENST00000542362	C16orf59	Q7L2K0	433 aa		10.35	□□□□□ -0.75
POLE-218	ENST00000542362	TRMT1L	Q7Z2T5	733 aa	Known RBP	10.35	□□□□□ -0.75
POLE-218	ENST00000542362	CCDC60	Q8IWA6	550 aa	Predicted RBP	10.35	□□□□□ -0.75
POLE-218	ENST00000542362	CCDC12	Q8WUD4	166 aa	Predicted RBP	10.35	□□□□□ -0.75
POLE-218	ENST00000542362	TMX3	Q96JJ7	454 aa		10.35	□□□□□ -0.75
POLE-218	ENST00000542362	TOX2	Q96NM4	488 aa		10.35	□□□□□ -0.75
POLE-218	ENST00000542362	HIPK3	Q9H422	1215 aa		10.35	□□□□□ -0.75
POLE-218	ENST00000542362	EHMT1	Q9H9B1	1298 aa		10.35	□□□□□ -0.75
POLE-218	ENST00000542362	GTF2IRD1	Q9UHL9	959 aa		10.35	□□□□□ -0.75
POLE-218	ENST00000542362	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	10.34	□□□□□ -0.75
POLE-218	ENST00000542362	CUL9	Q8IWT3	2517 aa		10.34	□□□□□ -0.75
POLE-218	ENST00000542362		H3BRB1	525 aa		10.34	□□□□□ -0.75
POLE-218	ENST00000542362	TREH	O43280	583 aa		10.34	□□□□□ -0.75
POLE-218	ENST00000542362	CHMP2A	O43633	222 aa		10.34	□□□□□ -0.75
POLE-218	ENST00000542362	CABYR	O75952	493 aa		10.34	□□□□□ -0.75
POLE-218	ENST00000542362	CDKL5	O76039	1030 aa		10.34	□□□□□ -0.75
POLE-218	ENST00000542362	TIMP1	P01033	207 aa		10.34	□□□□□ -0.75
POLE-218	ENST00000542362	SMIM10L2A	P0DMW4	78 aa		10.34	□□□□□ -0.75
POLE-218	ENST00000542362	SMIM10L2B	P0DMW5	78 aa		10.34	□□□□□ -0.75
POLE-218	ENST00000542362	TGFB3	P10600	412 aa		10.34	□□□□□ -0.75
POLE-218	ENST00000542362	ACTR2	P61160	394 aa		10.34	□□□□□ -0.75
POLE-218	ENST00000542362	NBR1	Q14596	966 aa		10.34	□□□□□ -0.75
POLE-218	ENST00000542362	GPNMB	Q14956	572 aa		10.34	□□□□□ -0.75
POLE-218	ENST00000542362	PTGIS	Q16647	500 aa		10.34	□□□□□ -0.75
POLE-218	ENST00000542362	UGCG	Q16739	394 aa		10.34	□□□□□ -0.75
POLE-218	ENST00000542362	LETM2	Q2VYF4	491 aa		10.34	□□□□□ -0.75
POLE-218	ENST00000542362	FAM109B	Q6ICB4	259 aa	Predicted RBP	10.34	□□□□□ -0.75
POLE-218	ENST00000542362	XRRA1	Q6P2D8	792 aa		10.34	□□□□□ -0.75
POLE-218	ENST00000542362	KCNV1	Q6PIU1	500 aa		10.34	□□□□□ -0.75
POLE-218	ENST00000542362	RUFY4	Q6ZNE9	571 aa		10.34	□□□□□ -0.75
POLE-218	ENST00000542362	POTED	Q86YR6	584 aa		10.34	□□□□□ -0.75
POLE-218	ENST00000542362	SENP7	Q9BQF6	1050 aa		10.34	□□□□□ -0.75
POLE-218	ENST00000542362	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	10.34	□□□□□ -0.75	2e-6	■■■□□ 18.1
POLE-218	ENST00000542362	TUT1	Q9H6E5	874 aa	Known RBP	10.34	□□□□□ -0.75
POLE-218	ENST00000542362	JPH1	Q9HDC5	661 aa	Predicted RBP	10.34	□□□□□ -0.75
POLE-218	ENST00000542362	FOXD4L1	Q9NU39	408 aa		10.34	□□□□□ -0.75
POLE-218	ENST00000542362	SETD4	Q9NVD3	440 aa		10.34	□□□□□ -0.75
POLE-218	ENST00000542362	SLC9A2	Q9UBY0	812 aa		10.34	□□□□□ -0.75
POLE-218	ENST00000542362	PRKAG2	Q9UGJ0	569 aa		10.34	□□□□□ -0.75
POLE-218	ENST00000542362	REV3L	O60673	3130 aa		10.34	□□□□□ -0.75
POLE-218	ENST00000542362	NFASC	O94856	1347 aa		10.33	□□□□□ -0.76
POLE-218	ENST00000542362	MROH7	Q68CQ1	1323 aa		10.33	□□□□□ -0.76
POLE-218	ENST00000542362	TMEM150B	A6NC51	233 aa		10.33	□□□□□ -0.76
POLE-218	ENST00000542362	IPO5	O00410	1097 aa	Known RBP	10.33	□□□□□ -0.76
POLE-218	ENST00000542362	TLR3	O15455	904 aa	Known RBP	10.33	□□□□□ -0.76
POLE-218	ENST00000542362	MMP1	P03956	469 aa		10.33	□□□□□ -0.76
POLE-218	ENST00000542362	ATP4A	P20648	1035 aa		10.33	□□□□□ -0.76
POLE-218	ENST00000542362	CIITA	P33076	1130 aa		10.33	□□□□□ -0.76
POLE-218	ENST00000542362	KRT2	P35908	639 aa		10.33	□□□□□ -0.76
POLE-218	ENST00000542362	IGBP1	P78318	339 aa		10.33	□□□□□ -0.76
POLE-218	ENST00000542362	NONO	Q15233	471 aa	Known RBP eCLIP	10.33	□□□□□ -0.76
POLE-218	ENST00000542362	TRIM71	Q2Q1W2	868 aa	Known RBP	10.33	□□□□□ -0.76
POLE-218	ENST00000542362	BRDT	Q58F21	947 aa	Predicted RBP	10.33	□□□□□ -0.76
POLE-218	ENST00000542362	NFRKB	Q6P4R8	1299 aa		10.33	□□□□□ -0.76
POLE-218	ENST00000542362	TRAF7	Q6Q0C0	670 aa		10.33	□□□□□ -0.76
POLE-218	ENST00000542362	DEFB128	Q7Z7B8	93 aa		10.33	□□□□□ -0.76
POLE-218	ENST00000542362	DIS3L2	Q8IYB7	885 aa	Known RBP	10.33	□□□□□ -0.76
POLE-218	ENST00000542362	LBHD1	Q9BQE6	289 aa	Predicted RBP	10.33	□□□□□ -0.76
POLE-218	ENST00000542362	ZNF577	Q9BSK1	485 aa		10.33	□□□□□ -0.76
POLE-218	ENST00000542362	UNC45A	Q9H3U1	944 aa		10.33	□□□□□ -0.76
POLE-218	ENST00000542362	GRXCR1	A8MXD5	290 aa		10.32	□□□□□ -0.76
POLE-218	ENST00000542362	PPFIA4	O75335	1185 aa		10.32	□□□□□ -0.76
POLE-218	ENST00000542362	CTSH	P09668	335 aa		10.32	□□□□□ -0.76
POLE-218	ENST00000542362	ATP2B1	P20020	1258 aa		10.32	□□□□□ -0.76
POLE-218	ENST00000542362	FPGS	Q05932	587 aa		10.32	□□□□□ -0.76
POLE-218	ENST00000542362	MBTPS1	Q14703	1052 aa		10.32	□□□□□ -0.76
POLE-218	ENST00000542362	PLCB4	Q15147	1175 aa		10.32	□□□□□ -0.76
POLE-218	ENST00000542362	MFSD5	Q6N075	450 aa		10.32	□□□□□ -0.76
POLE-218	ENST00000542362	TMCO2	Q7Z6W1	182 aa	Predicted RBP	10.32	□□□□□ -0.76
POLE-218	ENST00000542362	TDH	Q8IZJ6	230 aa		10.32	□□□□□ -0.76
POLE-218	ENST00000542362	C7orf31	Q8N865	590 aa		10.32	□□□□□ -0.76
POLE-218	ENST00000542362	ETNPPL	Q8TBG4	499 aa		10.32	□□□□□ -0.76
POLE-218	ENST00000542362	BICD2	Q8TD16	824 aa		10.32	□□□□□ -0.76
POLE-218	ENST00000542362	LMBR1	Q8WVP7	490 aa		10.32	□□□□□ -0.76
POLE-218	ENST00000542362	SEPT1	Q8WYJ6	367 aa		10.32	□□□□□ -0.76
POLE-218	ENST00000542362	SH2D3A	Q9BRG2	576 aa		10.32	□□□□□ -0.76
POLE-218	ENST00000542362	GLT8D2	Q9H1C3	349 aa		10.32	□□□□□ -0.76
POLE-218	ENST00000542362	UPF2	Q9HAU5	1272 aa	Known RBP	10.32	□□□□□ -0.76
POLE-218	ENST00000542362	CXXC1	Q9P0U4	656 aa	Predicted RBP	10.32	□□□□□ -0.76
POLE-218	ENST00000542362	UNC80	Q8N2C7	3258 aa		10.32	□□□□□ -0.76
POLE-218	ENST00000542362	TRIP11	Q15643	1979 aa		10.32	□□□□□ -0.76
POLE-218	ENST00000542362	EMSY	Q7Z589	1322 aa		10.32	□□□□□ -0.76
POLE-218	ENST00000542362	COL4A6	Q14031	1691 aa		10.31	□□□□□ -0.76
POLE-218	ENST00000542362	CCDC194	A0A1B0GVG4	234 aa		10.31	□□□□□ -0.76
POLE-218	ENST00000542362		A0A1W2PPC1	479 aa		10.31	□□□□□ -0.76
POLE-218	ENST00000542362	EML1	O00423	815 aa		10.31	□□□□□ -0.76
POLE-218	ENST00000542362	ST18	O60284	1047 aa		10.31	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms