RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 E7EWF7 191 aa17.78■□□□□ 0.44
RTN3-211ENST00000542238 H3BQ06 376 aaPredicted RBP17.78■□□□□ 0.44
RTN3-211ENST00000542238 SEMA3FQ13275 785 aa17.78■□□□□ 0.44
RTN3-211ENST00000542238 TCEAL5Q5H9L2 206 aa17.78■□□□□ 0.44
RTN3-211ENST00000542238 PCNX4Q63HM2 1172 aa17.78■□□□□ 0.44
RTN3-211ENST00000542238 CTCFLQ8NI51 663 aaPredicted RBP17.78■□□□□ 0.44
RTN3-211ENST00000542238 EXOC6Q8TAG9 804 aa17.78■□□□□ 0.44
RTN3-211ENST00000542238 LMBR1Q8WVP7 490 aa17.78■□□□□ 0.44
RTN3-211ENST00000542238 PABPC5Q96DU9 382 aaKnown RBP17.78■□□□□ 0.44
RTN3-211ENST00000542238 RRP36Q96EU6 259 aaKnown RBP17.78■□□□□ 0.44
RTN3-211ENST00000542238 OSBPL7Q9BZF2 842 aa17.78■□□□□ 0.44
RTN3-211ENST00000542238 SEC63Q9UGP8 760 aaKnown RBP17.78■□□□□ 0.44
RTN3-211ENST00000542238 PRR33A8MZF0 331 aa17.77■□□□□ 0.44
RTN3-211ENST00000542238 NCK2O43639 380 aa17.77■□□□□ 0.44
RTN3-211ENST00000542238 KIF5BP33176 963 aa17.77■□□□□ 0.44
RTN3-211ENST00000542238 ADAM17P78536 824 aa17.77■□□□□ 0.44
RTN3-211ENST00000542238 PTH1RQ03431 593 aa17.77■□□□□ 0.44
RTN3-211ENST00000542238 TTC22Q5TAA0 569 aa17.77■□□□□ 0.44
RTN3-211ENST00000542238 TAF2Q6P1X5 1199 aa17.77■□□□□ 0.44
RTN3-211ENST00000542238 USP17L6PQ6QN14 398 aa17.77■□□□□ 0.44
RTN3-211ENST00000542238 RSPH3Q86UC2 560 aa17.77■□□□□ 0.44
RTN3-211ENST00000542238 RWDD3Q9Y3V2 267 aa17.77■□□□□ 0.44
RTN3-211ENST00000542238 MYO7AQ13402 2215 aa17.77■□□□□ 0.44
RTN3-211ENST00000542238 MUC6Q6W4X9 2439 aa17.77■□□□□ 0.43
RTN3-211ENST00000542238 PIK3CDO00329 1044 aa17.76■□□□□ 0.43
RTN3-211ENST00000542238 RB1P06400 928 aa17.76■□□□□ 0.43
RTN3-211ENST00000542238 CTNNB1P35222 781 aa17.76■□□□□ 0.43
RTN3-211ENST00000542238 CSPP1Q1MSJ5 1256 aa17.76■□□□□ 0.43
RTN3-211ENST00000542238 CDHR1Q96JP9 859 aa17.76■□□□□ 0.43
RTN3-211ENST00000542238 MAP3K14Q99558 947 aa17.76■□□□□ 0.43
RTN3-211ENST00000542238 C11orf84Q9BUA3 381 aaPredicted RBP17.76■□□□□ 0.43
RTN3-211ENST00000542238 SPZ1Q9BXG8 430 aa17.76■□□□□ 0.43
RTN3-211ENST00000542238 CLDND1Q9NY35 253 aa17.76■□□□□ 0.43
RTN3-211ENST00000542238 CHRNA1P02708 482 aa17.75■□□□□ 0.43
RTN3-211ENST00000542238 GSPT1P15170 499 aaKnown RBP17.75■□□□□ 0.43
RTN3-211ENST00000542238 SMARCA1P28370 1054 aa17.75■□□□□ 0.43
RTN3-211ENST00000542238 TCF7P36402 384 aaPredicted RBP17.75■□□□□ 0.43
RTN3-211ENST00000542238 RPAINQ86UA6 219 aa17.75■□□□□ 0.43
RTN3-211ENST00000542238 IGDCC4Q8TDY8 1250 aa17.75■□□□□ 0.43
RTN3-211ENST00000542238 UIMC1Q96RL1 719 aa17.75■□□□□ 0.43
RTN3-211ENST00000542238 LZTS2Q9BRK4 669 aa17.75■□□□□ 0.43
RTN3-211ENST00000542238 LMAN2LQ9H0V9 348 aa17.75■□□□□ 0.43
RTN3-211ENST00000542238 PRKAG3Q9UGI9 489 aa17.75■□□□□ 0.43
RTN3-211ENST00000542238 C5orf67F2Z3F1 127 aa17.74■□□□□ 0.43
RTN3-211ENST00000542238 MEIS2O14770 477 aa17.74■□□□□ 0.43
RTN3-211ENST00000542238 DDAH1O94760 285 aa17.74■□□□□ 0.43
RTN3-211ENST00000542238 GHRP10912 638 aa17.74■□□□□ 0.43
RTN3-211ENST00000542238 CHMLP26374 656 aa17.74■□□□□ 0.43
RTN3-211ENST00000542238 BMPR1AP36894 532 aa17.74■□□□□ 0.43
RTN3-211ENST00000542238 GNAQP50148 359 aa17.74■□□□□ 0.43
RTN3-211ENST00000542238 PPFIA1Q13136 1202 aa17.74■□□□□ 0.43
RTN3-211ENST00000542238 COL19A1Q14993 1142 aa17.74■□□□□ 0.43
RTN3-211ENST00000542238 CASC1Q6TDU7 716 aa17.74■□□□□ 0.43
RTN3-211ENST00000542238 ZNF654Q8IZM8 581 aa17.74■□□□□ 0.43
RTN3-211ENST00000542238 SEPT1Q8WYJ6 367 aa17.74■□□□□ 0.43
RTN3-211ENST00000542238 GPRASP2Q96D09 838 aa17.74■□□□□ 0.43
RTN3-211ENST00000542238 ERAP1Q9NZ08 941 aa17.74■□□□□ 0.43
RTN3-211ENST00000542238 TELO2Q9Y4R8 837 aa17.74■□□□□ 0.43
RTN3-211ENST00000542238 ADGRA3Q8IWK6 1321 aa17.73■□□□□ 0.43
RTN3-211ENST00000542238 ATG2AQ2TAZ0 1938 aa17.73■□□□□ 0.43
RTN3-211ENST00000542238 TTC3P53804 2025 aa17.73■□□□□ 0.43
RTN3-211ENST00000542238 DCXO43602 365 aa17.73■□□□□ 0.43
RTN3-211ENST00000542238 ANTXR2P58335 489 aa17.73■□□□□ 0.43
RTN3-211ENST00000542238 RUFY4Q6ZNE9 571 aa17.73■□□□□ 0.43
RTN3-211ENST00000542238 GLG1Q92896 1179 aa17.73■□□□□ 0.43
RTN3-211ENST00000542238 PSTPIP2Q9H939 334 aa17.73■□□□□ 0.43
RTN3-211ENST00000542238 EHMT1Q9H9B1 1298 aa17.73■□□□□ 0.43
RTN3-211ENST00000542238 TUBE1Q9UJT0 475 aa17.73■□□□□ 0.43
RTN3-211ENST00000542238 SUPT16HQ9Y5B9 1047 aaKnown RBP17.73■□□□□ 0.43
RTN3-211ENST00000542238 TAF6LQ9Y6J9 622 aa17.73■□□□□ 0.43
RTN3-211ENST00000542238 PIEZO1Q92508 2521 aa17.73■□□□□ 0.43
RTN3-211ENST00000542238 ENPP3O14638 875 aa17.72■□□□□ 0.43
RTN3-211ENST00000542238 RPLP2P05387 115 aaKnown RBP17.72■□□□□ 0.43
RTN3-211ENST00000542238 PDE4AP27815 886 aa17.72■□□□□ 0.43
RTN3-211ENST00000542238 BTG3Q14201 252 aaPredicted RBP17.72■□□□□ 0.43
RTN3-211ENST00000542238 LPIN1Q14693 890 aa17.72■□□□□ 0.43
RTN3-211ENST00000542238 GRIK4Q16099 956 aa17.72■□□□□ 0.43
RTN3-211ENST00000542238 NFXL1Q6ZNB6 911 aa17.72■□□□□ 0.43
RTN3-211ENST00000542238 MB21D2Q8IYB1 491 aaPredicted RBP17.72■□□□□ 0.43
RTN3-211ENST00000542238 TMTC2Q8N394 836 aa17.72■□□□□ 0.43
RTN3-211ENST00000542238 MTA3Q9BTC8 594 aa17.72■□□□□ 0.43
RTN3-211ENST00000542238 MYL10Q9BUA6 226 aa17.72■□□□□ 0.43
RTN3-211ENST00000542238 UPF3BQ9BZI7 483 aaKnown RBP17.72■□□□□ 0.43
RTN3-211ENST00000542238 SMARCAD1Q9H4L7 1026 aa17.72■□□□□ 0.43
RTN3-211ENST00000542238 LY9Q9HBG7 655 aa17.72■□□□□ 0.43
RTN3-211ENST00000542238 GRM6O15303 877 aa17.71■□□□□ 0.43
RTN3-211ENST00000542238 SGSM2O43147 1006 aa17.71■□□□□ 0.43
RTN3-211ENST00000542238 ATP9AO75110 1047 aa17.71■□□□□ 0.43
RTN3-211ENST00000542238 KCNA2P16389 499 aa17.71■□□□□ 0.43
RTN3-211ENST00000542238 MARK3P27448 753 aa17.71■□□□□ 0.43
RTN3-211ENST00000542238 ZP2Q05996 745 aa17.71■□□□□ 0.43
RTN3-211ENST00000542238 MGAT3Q09327 533 aa17.71■□□□□ 0.43
RTN3-211ENST00000542238 MTMR1Q13613 665 aa17.71■□□□□ 0.43
RTN3-211ENST00000542238 TSHZ1Q6ZSZ6 1077 aa17.71■□□□□ 0.43
RTN3-211ENST00000542238 ADHFE1Q8IWW8 467 aa17.71■□□□□ 0.43
RTN3-211ENST00000542238 DNAJB3Q8WWF6 145 aa17.71■□□□□ 0.43
RTN3-211ENST00000542238 MAP4K1Q92918 833 aa17.71■□□□□ 0.43
RTN3-211ENST00000542238 CLP1Q92989 425 aaKnown RBP17.71■□□□□ 0.43
RTN3-211ENST00000542238 GSTTP1A0A1W2PQM5 241 aa17.7■□□□□ 0.42
RTN3-211ENST00000542238 MBLAC1A4D2B0 266 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms