RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 KRT19P08727 400 aa17.58■□□□□ 0.4
VARS2-212ENST00000542001 RCAN1P53805 252 aa17.58■□□□□ 0.4
VARS2-212ENST00000542001 WDR44Q5JSH3 913 aa17.58■□□□□ 0.4
VARS2-212ENST00000542001 KAZNQ674X7 775 aa17.58■□□□□ 0.4
VARS2-212ENST00000542001 USP37Q86T82 979 aa17.58■□□□□ 0.4
VARS2-212ENST00000542001 MTA3Q9BTC8 594 aa17.58■□□□□ 0.4
VARS2-212ENST00000542001 MAGEF1Q9HAY2 307 aa17.58■□□□□ 0.4
VARS2-212ENST00000542001 ANKFY1Q9P2R3 1169 aa17.58■□□□□ 0.4
VARS2-212ENST00000542001 ZBTB12Q9Y330 459 aaPredicted RBP17.58■□□□□ 0.4
VARS2-212ENST00000542001 TACC3Q9Y6A5 838 aa17.58■□□□□ 0.4
VARS2-212ENST00000542001 STAT2P52630 851 aa17.58■□□□□ 0.4
VARS2-212ENST00000542001 MAGOHBQ96A72 148 aaKnown RBP17.58■□□□□ 0.4
VARS2-212ENST00000542001 OSBPL9Q96SU4 736 aa17.58■□□□□ 0.4
VARS2-212ENST00000542001 L2HGDHQ9H9P8 463 aa17.58■□□□□ 0.4
VARS2-212ENST00000542001 CAPN11Q9UMQ6 739 aa17.58■□□□□ 0.4
VARS2-212ENST00000542001 GCLMP48507 274 aa17.57■□□□□ 0.4
VARS2-212ENST00000542001 CC2D2BQ6DHV5 1058 aa17.57■□□□□ 0.4
VARS2-212ENST00000542001 KRT27Q7Z3Y8 459 aa17.57■□□□□ 0.4
VARS2-212ENST00000542001 UBL4BQ8N7F7 174 aa17.57■□□□□ 0.4
VARS2-212ENST00000542001 COG1Q8WTW3 980 aa17.57■□□□□ 0.4
VARS2-212ENST00000542001 PAGR1Q9BTK6 254 aa17.57■□□□□ 0.4
VARS2-212ENST00000542001 CCSER1Q9C0I3 900 aa17.57■□□□□ 0.4
VARS2-212ENST00000542001 COA1Q9GZY4 146 aa17.57■□□□□ 0.4
VARS2-212ENST00000542001 MED4Q9NPJ6 270 aa17.57■□□□□ 0.4
VARS2-212ENST00000542001 CAPN7Q9Y6W3 813 aa17.57■□□□□ 0.4
VARS2-212ENST00000542001 SLIT1O75093 1534 aa17.57■□□□□ 0.4
VARS2-212ENST00000542001 LRRC63Q05C16 580 aa17.57■□□□□ 0.4
VARS2-212ENST00000542001 ARHGEF16Q5VV41 709 aa17.57■□□□□ 0.4
VARS2-212ENST00000542001 ZNF365Q70YC5 407 aa17.57■□□□□ 0.4
VARS2-212ENST00000542001 POMGNT1Q8WZA1 660 aa17.57■□□□□ 0.4
VARS2-212ENST00000542001 IL17RAQ96F46 866 aa17.57■□□□□ 0.4
VARS2-212ENST00000542001 DYDC2Q96IM9 177 aa17.57■□□□□ 0.4
VARS2-212ENST00000542001 CYTH3O43739 400 aa17.57■□□□□ 0.4
VARS2-212ENST00000542001 SLC9A1P19634 815 aa17.57■□□□□ 0.4
VARS2-212ENST00000542001 MYL7Q01449 175 aa17.57■□□□□ 0.4
VARS2-212ENST00000542001 NNTQ13423 1086 aa17.57■□□□□ 0.4
VARS2-212ENST00000542001 NIM1KQ8IY84 436 aa17.57■□□□□ 0.4
VARS2-212ENST00000542001 NUDT12Q9BQG2 462 aa17.57■□□□□ 0.4
VARS2-212ENST00000542001 TEKT3Q9BXF9 490 aa17.57■□□□□ 0.4
VARS2-212ENST00000542001 SH2D4AQ9H788 454 aa17.57■□□□□ 0.4
VARS2-212ENST00000542001 SWAP70Q9UH65 585 aa17.57■□□□□ 0.4
VARS2-212ENST00000542001 IFT88Q13099 833 aa17.56■□□□□ 0.4
VARS2-212ENST00000542001 STK32BQ9NY57 414 aa17.56■□□□□ 0.4
VARS2-212ENST00000542001 LRRIQ4A6NIV6 560 aa17.56■□□□□ 0.4
VARS2-212ENST00000542001 HNRNPDLO14979 420 aaKnown RBP17.56■□□□□ 0.4
VARS2-212ENST00000542001 SERPING1P05155 500 aa17.56■□□□□ 0.4
VARS2-212ENST00000542001 ZNF18P17022 549 aa17.56■□□□□ 0.4
VARS2-212ENST00000542001 DHX9Q08211 1270 aaKnown RBP17.56■□□□□ 0.4
VARS2-212ENST00000542001 EZH2Q15910 746 aaKnown RBP17.56■□□□□ 0.4
VARS2-212ENST00000542001 GLYCTKQ8IVS8 523 aa17.56■□□□□ 0.4
VARS2-212ENST00000542001 GOLGA5Q8TBA6 731 aa17.56■□□□□ 0.4
VARS2-212ENST00000542001 ZNF408Q9H9D4 720 aa17.56■□□□□ 0.4
VARS2-212ENST00000542001 PICK1Q9NRD5 415 aa17.56■□□□□ 0.4
VARS2-212ENST00000542001 POLLQ9UGP5 575 aa17.56■□□□□ 0.4
VARS2-212ENST00000542001 GRM1Q13255 1194 aa17.56■□□□□ 0.4
VARS2-212ENST00000542001 GIMAP8Q8ND71 665 aaPredicted RBP17.56■□□□□ 0.4
VARS2-212ENST00000542001 GLIS3Q8NEA6 775 aa17.56■□□□□ 0.4
VARS2-212ENST00000542001 IFT74Q96LB3 600 aa17.56■□□□□ 0.4
VARS2-212ENST00000542001 PPP1R16BQ96T49 567 aa17.56■□□□□ 0.4
VARS2-212ENST00000542001 TRPC5Q9UL62 973 aaPredicted RBP17.56■□□□□ 0.4
VARS2-212ENST00000542001 MRPL11Q9Y3B7 192 aaKnown RBP17.56■□□□□ 0.4
VARS2-212ENST00000542001 RGPD8O14715 1765 aaPredicted RBP17.55■□□□□ 0.4
VARS2-212ENST00000542001 TBC1D8O95759 1140 aa17.55■□□□□ 0.4
VARS2-212ENST00000542001 MYL1P05976 194 aa17.55■□□□□ 0.4
VARS2-212ENST00000542001 GCFC2P16383 781 aaKnown RBP17.55■□□□□ 0.4
VARS2-212ENST00000542001 AFF2P51816 1311 aa17.55■□□□□ 0.4
VARS2-212ENST00000542001 PEX3P56589 373 aa17.55■□□□□ 0.4
VARS2-212ENST00000542001 GJB7Q6PEY0 223 aa17.55■□□□□ 0.4
VARS2-212ENST00000542001 DCUN1D2Q6PH85 259 aa17.55■□□□□ 0.4
VARS2-212ENST00000542001 SPATA4Q8NEY3 305 aa17.55■□□□□ 0.4
VARS2-212ENST00000542001 PARVGQ9HBI0 331 aa17.55■□□□□ 0.4
VARS2-212ENST00000542001 TRIM66O15016 1216 aa17.55■□□□□ 0.4
VARS2-212ENST00000542001 RHOBTB3O94955 611 aa17.55■□□□□ 0.4
VARS2-212ENST00000542001 FGGP02679 453 aa17.55■□□□□ 0.4
VARS2-212ENST00000542001 ATF7P17544 494 aaPredicted RBP17.55■□□□□ 0.4
VARS2-212ENST00000542001 PSMC2P35998 433 aaKnown RBP17.55■□□□□ 0.4
VARS2-212ENST00000542001 SBK1Q52WX2 424 aa17.55■□□□□ 0.4
VARS2-212ENST00000542001 ZC2HC1CQ53FD0 456 aaPredicted RBP17.55■□□□□ 0.4
VARS2-212ENST00000542001 JMJD4Q9H9V9 463 aa17.55■□□□□ 0.4
VARS2-212ENST00000542001 METTL14Q9HCE5 456 aaKnown RBP17.55■□□□□ 0.4
VARS2-212ENST00000542001 STIM2Q9P246 746 aa17.55■□□□□ 0.4
VARS2-212ENST00000542001 TSKSQ9UJT2 592 aa17.55■□□□□ 0.4
VARS2-212ENST00000542001 FHOD1Q9Y613 1164 aa17.55■□□□□ 0.4
VARS2-212ENST00000542001 NR3C1P04150 777 aa17.55■□□□□ 0.4
VARS2-212ENST00000542001 ZNF543Q08ER8 600 aa17.55■□□□□ 0.4
VARS2-212ENST00000542001 GUF1Q8N442 669 aaKnown RBP17.55■□□□□ 0.4
VARS2-212ENST00000542001 FOSP01100 380 aaPredicted RBP17.54■□□□□ 0.4
VARS2-212ENST00000542001 SRGNP10124 158 aa17.54■□□□□ 0.4
VARS2-212ENST00000542001 USP14P54578 494 aa17.54■□□□□ 0.4
VARS2-212ENST00000542001 PDXDC2PQ6P474 469 aa17.54■□□□□ 0.4
VARS2-212ENST00000542001 ANAPC4Q9UJX5 808 aa17.54■□□□□ 0.4
VARS2-212ENST00000542001 TMOD1P28289 359 aa17.54■□□□□ 0.4
VARS2-212ENST00000542001 ZNF341Q9BYN7 854 aa17.54■□□□□ 0.4
VARS2-212ENST00000542001 DNAJC12Q9UKB3 198 aa17.54■□□□□ 0.4
VARS2-212ENST00000542001 IKBKGQ9Y6K9 419 aa17.54■□□□□ 0.4
VARS2-212ENST00000542001 C3P01024 1663 aa17.54■□□□□ 0.4
VARS2-212ENST00000542001 ABCB11O95342 1321 aa17.54■□□□□ 0.4
VARS2-212ENST00000542001 CDC42EP5Q6NZY7 148 aa17.54■□□□□ 0.4
VARS2-212ENST00000542001 DDX42Q86XP3 938 aaKnown RBP eCLIP17.54■□□□□ 0.4
VARS2-212ENST00000542001 EXOC4Q96A65 974 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms