RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 TTYH3Q9C0H2 523 aa16.56■□□□□ 0.24
VARS2-211ENST00000541562 ACP6Q9NPH0 428 aa16.56■□□□□ 0.24
VARS2-211ENST00000541562 IRS2Q9Y4H2 1338 aa16.56■□□□□ 0.24
VARS2-211ENST00000541562 BCORQ6W2J9 1755 aa16.55■□□□□ 0.24
VARS2-211ENST00000541562 CEP104O60308 925 aa16.55■□□□□ 0.24
VARS2-211ENST00000541562 GFPT2O94808 682 aa16.55■□□□□ 0.24
VARS2-211ENST00000541562 SCFD1Q8WVM8 642 aa16.55■□□□□ 0.24
VARS2-211ENST00000541562 SIK3Q9Y2K2 1263 aa16.55■□□□□ 0.24
VARS2-211ENST00000541562 EML1O00423 815 aa16.55■□□□□ 0.24
VARS2-211ENST00000541562 APBA3O96018 575 aa16.55■□□□□ 0.24
VARS2-211ENST00000541562 RRP1BQ14684 758 aaKnown RBP16.55■□□□□ 0.24
VARS2-211ENST00000541562 RC3H1Q5TC82 1133 aaKnown RBP16.55■□□□□ 0.24
VARS2-211ENST00000541562 MYCT1Q8N699 235 aa16.55■□□□□ 0.24
VARS2-211ENST00000541562 TSEN2Q8NCE0 465 aaKnown RBP16.55■□□□□ 0.24
VARS2-211ENST00000541562 REEP2Q9BRK0 252 aa16.55■□□□□ 0.24
VARS2-211ENST00000541562 AJAP1Q9UKB5 411 aaPredicted RBP16.55■□□□□ 0.24
VARS2-211ENST00000541562 SSTR3P32745 418 aaPredicted RBP16.54■□□□□ 0.24
VARS2-211ENST00000541562 ARHGAP4P98171 946 aa16.54■□□□□ 0.24
VARS2-211ENST00000541562 NBPF9Q3BBW0 867 aa16.54■□□□□ 0.24
VARS2-211ENST00000541562 C8orf74Q6P047 294 aa16.54■□□□□ 0.24
VARS2-211ENST00000541562 AK8Q96MA6 479 aa16.54■□□□□ 0.24
VARS2-211ENST00000541562 PURBQ96QR8 312 aaKnown RBP16.54■□□□□ 0.24
VARS2-211ENST00000541562 CSRNP1Q96S65 589 aa16.54■□□□□ 0.24
VARS2-211ENST00000541562 RUSC1Q9BVN2 902 aa16.54■□□□□ 0.24
VARS2-211ENST00000541562 GLIS2Q9BZE0 524 aaPredicted RBP16.54■□□□□ 0.24
VARS2-211ENST00000541562 COL16A1Q07092 1604 aaPredicted RBP16.54■□□□□ 0.24
VARS2-211ENST00000541562 ATP2C2O75185 946 aa16.54■□□□□ 0.24
VARS2-211ENST00000541562 PAFAH1B1P43034 410 aa16.54■□□□□ 0.24
VARS2-211ENST00000541562 ZNF746Q6NUN9 644 aaPredicted RBP16.54■□□□□ 0.24
VARS2-211ENST00000541562 LRRC55Q6ZSA7 311 aa16.54■□□□□ 0.24
VARS2-211ENST00000541562 COL23A1Q86Y22 540 aaPredicted RBP16.54■□□□□ 0.24
VARS2-211ENST00000541562 ARL8AQ96BM9 186 aa16.54■□□□□ 0.24
VARS2-211ENST00000541562 DNAJC19Q96DA6 116 aa16.54■□□□□ 0.24
VARS2-211ENST00000541562 POLRMTO00411 1230 aaKnown RBP16.54■□□□□ 0.24
VARS2-211ENST00000541562 C21orf2O43822 256 aa16.54■□□□□ 0.24
VARS2-211ENST00000541562 FKBP3Q00688 224 aaKnown RBP16.54■□□□□ 0.24
VARS2-211ENST00000541562 MAP9Q49MG5 647 aa16.54■□□□□ 0.24
VARS2-211ENST00000541562 CREG2Q8IUH2 290 aa16.54■□□□□ 0.24
VARS2-211ENST00000541562 RUFY1Q96T51 708 aa16.54■□□□□ 0.24
VARS2-211ENST00000541562 CALCOCO1Q9P1Z2 691 aa16.54■□□□□ 0.24
VARS2-211ENST00000541562 A0A1B0GUL6 1792 aa16.54■□□□□ 0.24
VARS2-211ENST00000541562 DNAH12Q6ZR08 3092 aa16.53■□□□□ 0.24
VARS2-211ENST00000541562 GOLGA6BA6NDN3 693 aa16.53■□□□□ 0.24
VARS2-211ENST00000541562 EIF3CLB5ME19 914 aaKnown RBP16.53■□□□□ 0.24
VARS2-211ENST00000541562 MAP2K7O14733 419 aa16.53■□□□□ 0.24
VARS2-211ENST00000541562 GLI1P08151 1106 aa16.53■□□□□ 0.24
VARS2-211ENST00000541562 ARSHQ5FYA8 562 aa16.53■□□□□ 0.24
VARS2-211ENST00000541562 SLF2Q8IX21 1173 aa16.53■□□□□ 0.24
VARS2-211ENST00000541562 PROM2Q8N271 834 aa16.53■□□□□ 0.24
VARS2-211ENST00000541562 BANK1Q8NDB2 785 aa16.53■□□□□ 0.24
VARS2-211ENST00000541562 U2AF1L4Q8WU68 220 aaKnown RBP16.53■□□□□ 0.24
VARS2-211ENST00000541562 PRMT6Q96LA8 375 aaPredicted RBP16.53■□□□□ 0.24
VARS2-211ENST00000541562 EIF3CQ99613 913 aaKnown RBP16.53■□□□□ 0.24
VARS2-211ENST00000541562 LZTS2Q9BRK4 669 aa16.53■□□□□ 0.24
VARS2-211ENST00000541562 DOCK2Q92608 1830 aa16.53■□□□□ 0.24
VARS2-211ENST00000541562 A0A1W2PQC6 194 aa16.53■□□□□ 0.24
VARS2-211ENST00000541562 PSMD14O00487 310 aa16.53■□□□□ 0.24
VARS2-211ENST00000541562 BBOX1O75936 387 aa16.53■□□□□ 0.24
VARS2-211ENST00000541562 IL1R1P14778 569 aa16.53■□□□□ 0.24
VARS2-211ENST00000541562 CYP11B2P19099 503 aa16.53■□□□□ 0.24
VARS2-211ENST00000541562 ZNF211Q13398 564 aaPredicted RBP16.53■□□□□ 0.24
VARS2-211ENST00000541562 SH3BP5LQ7L8J4 393 aa16.53■□□□□ 0.24
VARS2-211ENST00000541562 MAATS1Q7Z4T9 603 aa16.53■□□□□ 0.24
VARS2-211ENST00000541562 CCDC65Q8IXS2 484 aa16.53■□□□□ 0.24
VARS2-211ENST00000541562 ALS2CR12Q96Q35 445 aa16.53■□□□□ 0.24
VARS2-211ENST00000541562 DPH5Q9H2P9 285 aa16.53■□□□□ 0.24
VARS2-211ENST00000541562 SH2D4AQ9H788 454 aa16.53■□□□□ 0.24
VARS2-211ENST00000541562 SNX12Q9UMY4 172 aa16.53■□□□□ 0.24
VARS2-211ENST00000541562 A0A1W2PRG0 241 aa16.53■□□□□ 0.24
VARS2-211ENST00000541562 HSPA1LP34931 641 aa16.53■□□□□ 0.24
VARS2-211ENST00000541562 ASPRV1Q53RT3 343 aa16.53■□□□□ 0.24
VARS2-211ENST00000541562 PPP1R18Q6NYC8 613 aa16.53■□□□□ 0.24
VARS2-211ENST00000541562 HDAC9Q9UKV0 1011 aa16.53■□□□□ 0.24
VARS2-211ENST00000541562 HPCAL4Q9UM19 191 aa16.53■□□□□ 0.24
VARS2-211ENST00000541562 PLAGL2Q9UPG8 496 aa16.53■□□□□ 0.24
VARS2-211ENST00000541562 NDUFB10O96000 172 aa16.52■□□□□ 0.24
VARS2-211ENST00000541562 PRPHP41219 470 aa16.52■□□□□ 0.24
VARS2-211ENST00000541562 PTK2Q05397 1052 aa16.52■□□□□ 0.24
VARS2-211ENST00000541562 SLC9C1Q4G0N8 1177 aa16.52■□□□□ 0.24
VARS2-211ENST00000541562 DAGLBQ8NCG7 672 aa16.52■□□□□ 0.24
VARS2-211ENST00000541562 MSANTD4Q8NCY6 345 aa16.52■□□□□ 0.24
VARS2-211ENST00000541562 RIC8AQ9NPQ8 531 aa16.52■□□□□ 0.24
VARS2-211ENST00000541562 COL14A1Q05707 1796 aaKnown RBP16.52■□□□□ 0.24
VARS2-211ENST00000541562 SYF2O95926 243 aaKnown RBP16.52■□□□□ 0.24
VARS2-211ENST00000541562 PRAMEF18Q5VWM3 479 aa16.52■□□□□ 0.24
VARS2-211ENST00000541562 TIAM2Q8IVF5 1701 aa16.52■□□□□ 0.23
VARS2-211ENST00000541562 GOLGA8IPA6NC78 632 aa16.52■□□□□ 0.23
VARS2-211ENST00000541562 GOLGA8JA6NMD2 632 aa16.52■□□□□ 0.23
VARS2-211ENST00000541562 HEXIM1O94992 359 aaKnown RBP16.52■□□□□ 0.23
VARS2-211ENST00000541562 CCT5P48643 541 aa16.52■□□□□ 0.23
VARS2-211ENST00000541562 PDCLQ13371 301 aa16.52■□□□□ 0.23
VARS2-211ENST00000541562 ABCB5Q2M3G0 1257 aa16.52■□□□□ 0.23
VARS2-211ENST00000541562 GALNT17Q6IS24 598 aa16.52■□□□□ 0.23
VARS2-211ENST00000541562 PDXDC1Q6P996 788 aa16.52■□□□□ 0.23
VARS2-211ENST00000541562 CCDC43Q96MW1 224 aaKnown RBP16.52■□□□□ 0.23
VARS2-211ENST00000541562 NUP58Q9BVL2 599 aa16.52■□□□□ 0.23
VARS2-211ENST00000541562 DDX47Q9H0S4 455 aaKnown RBP16.52■□□□□ 0.23
VARS2-211ENST00000541562 NOL4O94818 638 aa16.51■□□□□ 0.23
VARS2-211ENST00000541562 KIAA1755Q5JYT7 1200 aa16.51■□□□□ 0.23
VARS2-211ENST00000541562 FAM182AQ5T1J6 154 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms