RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 GSTA2P09210 222 aa16.14■□□□□ 0.17
SMARCA4-207ENST00000541122 KCNA6P17658 529 aa16.14■□□□□ 0.17
SMARCA4-207ENST00000541122 LRRC41Q15345 812 aa16.14■□□□□ 0.17
SMARCA4-207ENST00000541122 GPATCH4Q5T3I0 446 aaKnown RBP16.14■□□□□ 0.17
SMARCA4-207ENST00000541122 RSBN1LQ6PCB5 846 aaPredicted RBP16.14■□□□□ 0.17
SMARCA4-207ENST00000541122 FBXO11Q86XK2 927 aa16.14■□□□□ 0.17
SMARCA4-207ENST00000541122 KDM6BO15054 1643 aa16.14■□□□□ 0.17
SMARCA4-207ENST00000541122 HAUS5O94927 633 aa16.14■□□□□ 0.17
SMARCA4-207ENST00000541122 KRT1P04264 644 aa16.14■□□□□ 0.17
SMARCA4-207ENST00000541122 POLR2MP0CAP2 368 aa16.14■□□□□ 0.17
SMARCA4-207ENST00000541122 TTBK2Q6IQ55 1244 aa16.14■□□□□ 0.17
SMARCA4-207ENST00000541122 GSPT2Q8IYD1 628 aaKnown RBP16.14■□□□□ 0.17
SMARCA4-207ENST00000541122 ACCSQ96QU6 501 aa16.14■□□□□ 0.17
SMARCA4-207ENST00000541122 ZNF277Q9NRM2 450 aaPredicted RBP16.14■□□□□ 0.17
SMARCA4-207ENST00000541122 CHD1O14646 1710 aa16.13■□□□□ 0.17
SMARCA4-207ENST00000541122 SCYL2Q6P3W7 929 aa16.13■□□□□ 0.17
SMARCA4-207ENST00000541122 CRLF3Q8IUI8 442 aa16.13■□□□□ 0.17
SMARCA4-207ENST00000541122 FGD4Q96M96 766 aa16.13■□□□□ 0.17
SMARCA4-207ENST00000541122 EPC1Q9H2F5 836 aa16.13■□□□□ 0.17
SMARCA4-207ENST00000541122 ADORA1P30542 326 aa16.13■□□□□ 0.17
SMARCA4-207ENST00000541122 UNC13DQ70J99 1090 aa16.13■□□□□ 0.17
SMARCA4-207ENST00000541122 TEX9Q8N6V9 391 aa16.13■□□□□ 0.17
SMARCA4-207ENST00000541122 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.13■□□□□ 0.172e-7■■■□□ 14.8
SMARCA4-207ENST00000541122 PHF23Q9BUL5 403 aaPredicted RBP16.13■□□□□ 0.17
SMARCA4-207ENST00000541122 ACSL3O95573 720 aa16.13■□□□□ 0.17
SMARCA4-207ENST00000541122 PHKG2P15735 406 aa16.13■□□□□ 0.17
SMARCA4-207ENST00000541122 PHKA1P46020 1223 aa16.13■□□□□ 0.17
SMARCA4-207ENST00000541122 TSGA10IPQ3SY00 556 aa16.13■□□□□ 0.17
SMARCA4-207ENST00000541122 KRT39Q6A163 491 aa16.13■□□□□ 0.17
SMARCA4-207ENST00000541122 PDIK1LQ8N165 341 aa16.13■□□□□ 0.17
SMARCA4-207ENST00000541122 CABLES1Q8TDN4 633 aa16.13■□□□□ 0.17
SMARCA4-207ENST00000541122 ZNF473Q8WTR7 871 aaKnown RBP16.13■□□□□ 0.17
SMARCA4-207ENST00000541122 CCDC127Q96BQ5 260 aa16.13■□□□□ 0.17
SMARCA4-207ENST00000541122 OSBPL1AQ9BXW6 950 aa16.13■□□□□ 0.17
SMARCA4-207ENST00000541122 LCMT1Q9UIC8 334 aa16.13■□□□□ 0.17
SMARCA4-207ENST00000541122 YEATS2Q9ULM3 1422 aa16.13■□□□□ 0.17
SMARCA4-207ENST00000541122 TRIM66O15016 1216 aa16.13■□□□□ 0.17
SMARCA4-207ENST00000541122 AP2B1P63010 937 aa16.13■□□□□ 0.17
SMARCA4-207ENST00000541122 PIP4K2CQ8TBX8 421 aa16.13■□□□□ 0.17
SMARCA4-207ENST00000541122 CCDC138Q96M89 665 aa16.13■□□□□ 0.17
SMARCA4-207ENST00000541122 UIMC1Q96RL1 719 aa16.13■□□□□ 0.17
SMARCA4-207ENST00000541122 SASH1O94885 1247 aa16.12■□□□□ 0.17
SMARCA4-207ENST00000541122 PIK3CAP42336 1068 aa16.12■□□□□ 0.17
SMARCA4-207ENST00000541122 XKR9Q5GH70 373 aa16.12■□□□□ 0.17
SMARCA4-207ENST00000541122 ZC3H15Q8WU90 426 aaKnown RBP16.12■□□□□ 0.17
SMARCA4-207ENST00000541122 UPF3AQ9H1J1 476 aaKnown RBP16.12■□□□□ 0.17
SMARCA4-207ENST00000541122 USP40Q9NVE5 1235 aa16.12■□□□□ 0.17
SMARCA4-207ENST00000541122 SNX24Q9Y343 169 aa16.12■□□□□ 0.17
SMARCA4-207ENST00000541122 ORC6Q9Y5N6 252 aa16.12■□□□□ 0.17
SMARCA4-207ENST00000541122 ECE1P42892 770 aa16.12■□□□□ 0.17
SMARCA4-207ENST00000541122 ALCAMQ13740 583 aa16.12■□□□□ 0.17
SMARCA4-207ENST00000541122 MAML1Q92585 1016 aa16.12■□□□□ 0.17
SMARCA4-207ENST00000541122 ETNK1Q9HBU6 452 aa16.12■□□□□ 0.17
SMARCA4-207ENST00000541122 ITIH6Q6UXX5 1313 aa16.12■□□□□ 0.17
SMARCA4-207ENST00000541122 DLATP10515 647 aaKnown RBP16.12■□□□□ 0.17
SMARCA4-207ENST00000541122 EEF1DP29692 281 aaKnown RBP16.12■□□□□ 0.17
SMARCA4-207ENST00000541122 CHRNA3P32297 505 aa16.12■□□□□ 0.17
SMARCA4-207ENST00000541122 CDR2Q01850 454 aa16.12■□□□□ 0.17
SMARCA4-207ENST00000541122 BIRC2Q13490 618 aa16.12■□□□□ 0.17
SMARCA4-207ENST00000541122 ART3Q13508 389 aa16.12■□□□□ 0.17
SMARCA4-207ENST00000541122 EPM2AIP1Q7L775 607 aaPredicted RBP16.12■□□□□ 0.17
SMARCA4-207ENST00000541122 WDR75Q8IWA0 830 aaKnown RBP16.12■□□□□ 0.17
SMARCA4-207ENST00000541122 ZBTB8OSQ8IWT0 167 aa16.12■□□□□ 0.17
SMARCA4-207ENST00000541122 TBCKQ8TEA7 893 aa16.12■□□□□ 0.17
SMARCA4-207ENST00000541122 ZSWIM5Q9P217 1185 aa16.12■□□□□ 0.17
SMARCA4-207ENST00000541122 FRMPD2Q68DX3 1309 aaPredicted RBP16.12■□□□□ 0.17
SMARCA4-207ENST00000541122 RASA4BC9J798 803 aa16.12■□□□□ 0.17
SMARCA4-207ENST00000541122 H0Y3Z8 333 aa16.12■□□□□ 0.17
SMARCA4-207ENST00000541122 RASA4O43374 803 aa16.12■□□□□ 0.17
SMARCA4-207ENST00000541122 GOLGA8HP0CJ92 632 aa16.12■□□□□ 0.17
SMARCA4-207ENST00000541122 BCAMP50895 628 aa16.12■□□□□ 0.17
SMARCA4-207ENST00000541122 PPP2R5CQ13362 524 aa16.12■□□□□ 0.17
SMARCA4-207ENST00000541122 NYAP1Q6ZVC0 841 aa16.12■□□□□ 0.17
SMARCA4-207ENST00000541122 SPATA4Q8NEY3 305 aa16.12■□□□□ 0.17
SMARCA4-207ENST00000541122 MORC4Q8TE76 937 aa16.12■□□□□ 0.17
SMARCA4-207ENST00000541122 TRIM15Q9C019 465 aa16.12■□□□□ 0.17
SMARCA4-207ENST00000541122 GDAQ9Y2T3 454 aa16.12■□□□□ 0.17
SMARCA4-207ENST00000541122 NOP56O00567 594 aaKnown RBP16.11■□□□□ 0.17
SMARCA4-207ENST00000541122 PFDN6O15212 129 aa16.11■□□□□ 0.17
SMARCA4-207ENST00000541122 KRT37O76014 449 aa16.11■□□□□ 0.17
SMARCA4-207ENST00000541122 RAD23BP54727 409 aa16.11■□□□□ 0.17
SMARCA4-207ENST00000541122 RPS8P62241 208 aaKnown RBP16.11■□□□□ 0.17
SMARCA4-207ENST00000541122 PYROXD1Q8WU10 500 aa16.11■□□□□ 0.17
SMARCA4-207ENST00000541122 HESX1Q9UBX0 185 aa16.11■□□□□ 0.17
SMARCA4-207ENST00000541122 IPO11Q9UI26 975 aaKnown RBP16.11■□□□□ 0.17
SMARCA4-207ENST00000541122 PVALEFA0A1B0GWK0 134 aa16.11■□□□□ 0.17
SMARCA4-207ENST00000541122 STXBP3O00186 592 aa16.11■□□□□ 0.17
SMARCA4-207ENST00000541122 HDLBPQ00341 1268 aaKnown RBP16.11■□□□□ 0.17
SMARCA4-207ENST00000541122 PTPN12Q05209 780 aaKnown RBP16.11■□□□□ 0.17
SMARCA4-207ENST00000541122 PABPC4Q13310 644 aaKnown RBP eCLIP16.11■□□□□ 0.17
SMARCA4-207ENST00000541122 CUL4BQ13620 913 aa16.11■□□□□ 0.17
SMARCA4-207ENST00000541122 GNPTABQ3T906 1256 aa16.11■□□□□ 0.17
SMARCA4-207ENST00000541122 APLFQ8IW19 511 aaPredicted RBP16.11■□□□□ 0.17
SMARCA4-207ENST00000541122 MRPL40Q9NQ50 206 aaKnown RBP16.11■□□□□ 0.17
SMARCA4-207ENST00000541122 NOC2LQ9Y3T9 749 aaKnown RBP16.11■□□□□ 0.17
SMARCA4-207ENST00000541122 LRRC53A6NM62 1247 aa16.11■□□□□ 0.17
SMARCA4-207ENST00000541122 PDHA1P08559 390 aa16.11■□□□□ 0.17
SMARCA4-207ENST00000541122 PYGBP11216 843 aa16.11■□□□□ 0.17
SMARCA4-207ENST00000541122 NFRKBQ6P4R8 1299 aa16.11■□□□□ 0.17
SMARCA4-207ENST00000541122 RASGRP2Q7LDG7 609 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms