RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 GJB5O95377 273 aa16.6■□□□□ 0.25
MSRB3-209ENST00000540804 PARNO95453 639 aaKnown RBP16.6■□□□□ 0.25
MSRB3-209ENST00000540804 ADD1P35611 737 aaKnown RBP16.6■□□□□ 0.25
MSRB3-209ENST00000540804 NAPAP54920 295 aa16.6■□□□□ 0.25
MSRB3-209ENST00000540804 ADAM17P78536 824 aa16.6■□□□□ 0.25
MSRB3-209ENST00000540804 APOBRQ0VD83 1088 aa16.6■□□□□ 0.25
MSRB3-209ENST00000540804 GRB10Q13322 594 aa16.6■□□□□ 0.25
MSRB3-209ENST00000540804 MTMR1Q13613 665 aa16.6■□□□□ 0.25
MSRB3-209ENST00000540804 TSGA10IPQ3SY00 556 aa16.6■□□□□ 0.25
MSRB3-209ENST00000540804 RUFY4Q6ZNE9 571 aa16.6■□□□□ 0.25
MSRB3-209ENST00000540804 JADE2Q9NQC1 790 aa16.6■□□□□ 0.25
MSRB3-209ENST00000540804 THEGQ9P2T0 379 aa16.6■□□□□ 0.25
MSRB3-209ENST00000540804 DOCK5Q9H7D0 1870 aa16.6■□□□□ 0.25
MSRB3-209ENST00000540804 TRIP12Q14669 1992 aaPredicted RBP16.6■□□□□ 0.25
MSRB3-209ENST00000540804 STXBP3O00186 592 aa16.59■□□□□ 0.25
MSRB3-209ENST00000540804 PPFIA3O75145 1194 aa16.59■□□□□ 0.25
MSRB3-209ENST00000540804 ARP10275 920 aa16.59■□□□□ 0.25
MSRB3-209ENST00000540804 TFF2Q03403 129 aa16.59■□□□□ 0.25
MSRB3-209ENST00000540804 MKRN4PQ13434 485 aaPredicted RBP16.59■□□□□ 0.25
MSRB3-209ENST00000540804 PLEKHG4Q58EX7 1191 aa16.59■□□□□ 0.25
MSRB3-209ENST00000540804 GDPD5Q8WTR4 605 aa16.59■□□□□ 0.25
MSRB3-209ENST00000540804 ASB2Q96Q27 587 aa16.59■□□□□ 0.25
MSRB3-209ENST00000540804 UIMC1Q96RL1 719 aa16.59■□□□□ 0.25
MSRB3-209ENST00000540804 RBM28Q9NW13 759 aaKnown RBP16.59■□□□□ 0.25
MSRB3-209ENST00000540804 ZNF215Q9UL58 517 aaPredicted RBP16.59■□□□□ 0.25
MSRB3-209ENST00000540804 LPXNO60711 386 aa16.58■□□□□ 0.24
MSRB3-209ENST00000540804 SKIV2LQ15477 1246 aaKnown RBP16.58■□□□□ 0.24
MSRB3-209ENST00000540804 Q6ZUG5 572 aa16.58■□□□□ 0.24
MSRB3-209ENST00000540804 MYOCDQ8IZQ8 938 aa16.58■□□□□ 0.24
MSRB3-209ENST00000540804 SEPT1Q8WYJ6 367 aa16.58■□□□□ 0.24
MSRB3-209ENST00000540804 JAKMIP1Q96N16 626 aaKnown RBP16.58■□□□□ 0.24
MSRB3-209ENST00000540804 PCYT2Q99447 389 aa16.58■□□□□ 0.24
MSRB3-209ENST00000540804 RAD9AQ99638 391 aa16.58■□□□□ 0.24
MSRB3-209ENST00000540804 MXRA8Q9BRK3 442 aa16.58■□□□□ 0.24
MSRB3-209ENST00000540804 RIC8AQ9NPQ8 531 aa16.58■□□□□ 0.24
MSRB3-209ENST00000540804 SNX14Q9Y5W7 946 aa16.58■□□□□ 0.24
MSRB3-209ENST00000540804 LINC01553A4QN01 128 aa16.57■□□□□ 0.24
MSRB3-209ENST00000540804 SMCO2A6NFE2 343 aa16.57■□□□□ 0.24
MSRB3-209ENST00000540804 ADCY7P51828 1080 aa16.57■□□□□ 0.24
MSRB3-209ENST00000540804 IGBP1P78318 339 aa16.57■□□□□ 0.24
MSRB3-209ENST00000540804 GIMAP8Q8ND71 665 aaPredicted RBP16.57■□□□□ 0.24
MSRB3-209ENST00000540804 ATXN2LQ8WWM7 1075 aaKnown RBP16.57■□□□□ 0.24
MSRB3-209ENST00000540804 BRF1Q92994 677 aa16.57■□□□□ 0.24
MSRB3-209ENST00000540804 CCDC136Q96JN2 1154 aa16.57■□□□□ 0.24
MSRB3-209ENST00000540804 KCNH7Q9NS40 1196 aa16.57■□□□□ 0.24
MSRB3-209ENST00000540804 EMSYQ7Z589 1322 aa16.56■□□□□ 0.24
MSRB3-209ENST00000540804 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.56■□□□□ 0.24
MSRB3-209ENST00000540804 GTPBP6O43824 516 aaPredicted RBP16.56■□□□□ 0.24
MSRB3-209ENST00000540804 UPP2O95045 317 aa16.56■□□□□ 0.24
MSRB3-209ENST00000540804 CHRNA1P02708 482 aa16.56■□□□□ 0.24
MSRB3-209ENST00000540804 GNAT1P11488 350 aa16.56■□□□□ 0.24
MSRB3-209ENST00000540804 POU3F3P20264 500 aaPredicted RBP16.56■□□□□ 0.24
MSRB3-209ENST00000540804 MRPS5P82675 430 aaKnown RBP16.56■□□□□ 0.24
MSRB3-209ENST00000540804 PPFIA1Q13136 1202 aa16.56■□□□□ 0.24
MSRB3-209ENST00000540804 ITGB3BPQ13352 177 aaPredicted RBP16.56■□□□□ 0.24
MSRB3-209ENST00000540804 KRT32Q14532 448 aa16.56■□□□□ 0.24
MSRB3-209ENST00000540804 GRIK4Q16099 956 aa16.56■□□□□ 0.24
MSRB3-209ENST00000540804 MARCH8Q5T0T0 291 aa16.56■□□□□ 0.24
MSRB3-209ENST00000540804 JAKMIP3Q5VZ66 844 aa16.56■□□□□ 0.24
MSRB3-209ENST00000540804 SYMPKQ92797 1274 aaKnown RBP16.56■□□□□ 0.24
MSRB3-209ENST00000540804 GLG1Q92896 1179 aa16.56■□□□□ 0.24
MSRB3-209ENST00000540804 KCNB2Q92953 911 aa16.56■□□□□ 0.24
MSRB3-209ENST00000540804 CDHR1Q96JP9 859 aa16.56■□□□□ 0.24
MSRB3-209ENST00000540804 C17orf80Q9BSJ5 609 aa16.56■□□□□ 0.24
MSRB3-209ENST00000540804 ANO3Q9BYT9 981 aa16.56■□□□□ 0.24
MSRB3-209ENST00000540804 SUGCTQ9HAC7 445 aa16.56■□□□□ 0.24
MSRB3-209ENST00000540804 BARHL2Q9NY43 387 aa16.56■□□□□ 0.24
MSRB3-209ENST00000540804 NRCAMQ92823 1304 aa16.55■□□□□ 0.24
MSRB3-209ENST00000540804 AMHP03971 560 aa16.55■□□□□ 0.24
MSRB3-209ENST00000540804 HSPA4P34932 840 aa16.55■□□□□ 0.24
MSRB3-209ENST00000540804 CLK2P49760 499 aaKnown RBP16.55■□□□□ 0.24
MSRB3-209ENST00000540804 METAP2P50579 478 aaKnown RBP eCLIP16.55■□□□□ 0.24
MSRB3-209ENST00000540804 KCNQ1P51787 676 aa16.55■□□□□ 0.24
MSRB3-209ENST00000540804 FGD1P98174 961 aa16.55■□□□□ 0.24
MSRB3-209ENST00000540804 FAM26DQ5JW98 314 aa16.55■□□□□ 0.24
MSRB3-209ENST00000540804 TRAPPC12Q8WVT3 735 aa16.55■□□□□ 0.24
MSRB3-209ENST00000540804 DNAJB3Q8WWF6 145 aa16.55■□□□□ 0.24
MSRB3-209ENST00000540804 SEPT8Q92599 483 aa16.55■□□□□ 0.24
MSRB3-209ENST00000540804 NECAB3Q96P71 396 aaPredicted RBP16.55■□□□□ 0.24
MSRB3-209ENST00000540804 AGO4Q9HCK5 861 aaKnown RBP16.55■□□□□ 0.24
MSRB3-209ENST00000540804 JPH1Q9HDC5 661 aaPredicted RBP16.55■□□□□ 0.24
MSRB3-209ENST00000540804 ERAP1Q9NZ08 941 aa16.55■□□□□ 0.24
MSRB3-209ENST00000540804 SLC9A2Q9UBY0 812 aa16.55■□□□□ 0.24
MSRB3-209ENST00000540804 DDX39AO00148 427 aaKnown RBP16.54■□□□□ 0.24
MSRB3-209ENST00000540804 EFCAB14O75071 495 aa16.54■□□□□ 0.24
MSRB3-209ENST00000540804 GHRP10912 638 aa16.54■□□□□ 0.24
MSRB3-209ENST00000540804 ERVK-21P61565 698 aa16.54■□□□□ 0.24
MSRB3-209ENST00000540804 MGAT3Q09327 533 aa16.54■□□□□ 0.24
MSRB3-209ENST00000540804 PPP1R18Q6NYC8 613 aa16.54■□□□□ 0.24
MSRB3-209ENST00000540804 ADAMTS19Q8TE59 1207 aa16.54■□□□□ 0.24
MSRB3-209ENST00000540804 PHKBQ93100 1093 aa16.54■□□□□ 0.24
MSRB3-209ENST00000540804 TGS1Q96RS0 853 aaKnown RBP16.54■□□□□ 0.24
MSRB3-209ENST00000540804 SMARCAD1Q9H4L7 1026 aa16.54■□□□□ 0.24
MSRB3-209ENST00000540804 EHMT1Q9H9B1 1298 aa16.54■□□□□ 0.24
MSRB3-209ENST00000540804 TRANK1O15050 2925 aa16.53■□□□□ 0.24
MSRB3-209ENST00000540804 CAND2O75155 1236 aa16.53■□□□□ 0.24
MSRB3-209ENST00000540804 HMGB1P09429 215 aaKnown RBP16.53■□□□□ 0.24
MSRB3-209ENST00000540804 INSRRP14616 1297 aa16.53■□□□□ 0.24
MSRB3-209ENST00000540804 RPS6KB1P23443 525 aa16.53■□□□□ 0.24
MSRB3-209ENST00000540804 ACTR2P61160 394 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms