RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 RSPH10B2B2RC85 870 aa15.02■□□□□ -0
SEMA4D-223ENST00000540475 KIF28PB7ZC32 967 aa15.02■□□□□ -0
SEMA4D-223ENST00000540475 GJB5O95377 273 aa15.02■□□□□ -0
SEMA4D-223ENST00000540475 RSPH10BP0C881 870 aa15.02■□□□□ -0
SEMA4D-223ENST00000540475 TCF7P36402 384 aaPredicted RBP15.02■□□□□ -0
SEMA4D-223ENST00000540475 EVCP57679 992 aa15.02■□□□□ -0
SEMA4D-223ENST00000540475 MTMR1Q13613 665 aa15.02■□□□□ -0
SEMA4D-223ENST00000540475 IKBKEQ14164 716 aa15.02■□□□□ -0
SEMA4D-223ENST00000540475 SEPT1Q8WYJ6 367 aa15.02■□□□□ -0
SEMA4D-223ENST00000540475 MXRA8Q9BRK3 442 aa15.02■□□□□ -0
SEMA4D-223ENST00000540475 EHMT1Q9H9B1 1298 aa15.02■□□□□ -0
SEMA4D-223ENST00000540475 PRRC2BQ5JSZ5 2229 aaKnown RBP15.01□□□□□ -0.01
SEMA4D-223ENST00000540475 NFASCO94856 1347 aa15.01□□□□□ -0.01
SEMA4D-223ENST00000540475 ARHGEF15O94989 841 aa15.01□□□□□ -0.01
SEMA4D-223ENST00000540475 ADD1P35611 737 aaKnown RBP15.01□□□□□ -0.01
SEMA4D-223ENST00000540475 THPOP40225 353 aa15.01□□□□□ -0.01
SEMA4D-223ENST00000540475 KCNJ6P48051 423 aa15.01□□□□□ -0.01
SEMA4D-223ENST00000540475 NAPAP54920 295 aa15.01□□□□□ -0.01
SEMA4D-223ENST00000540475 DEFB103AP81534 67 aa15.01□□□□□ -0.01
SEMA4D-223ENST00000540475 AP3B2Q13367 1082 aa15.01□□□□□ -0.01
SEMA4D-223ENST00000540475 PFKFB3Q16875 520 aaPredicted RBP15.01□□□□□ -0.01
SEMA4D-223ENST00000540475 TRIM50Q86XT4 487 aa15.01□□□□□ -0.01
SEMA4D-223ENST00000540475 LMBR1Q8WVP7 490 aa15.01□□□□□ -0.01
SEMA4D-223ENST00000540475 CRYGNQ8WXF5 182 aa15.01□□□□□ -0.01
SEMA4D-223ENST00000540475 KCNH7Q9NS40 1196 aa15.01□□□□□ -0.01
SEMA4D-223ENST00000540475 SETD4Q9NVD3 440 aa15.01□□□□□ -0.01
SEMA4D-223ENST00000540475 ERAP1Q9NZ08 941 aa15.01□□□□□ -0.01
SEMA4D-223ENST00000540475 COL4A6Q14031 1691 aa15□□□□□ -0.01
SEMA4D-223ENST00000540475 LOXHD1Q8IVV2 1947 aa15□□□□□ -0.01
SEMA4D-223ENST00000540475 CCDC196A0A1B0GTZ2 297 aa15□□□□□ -0.01
SEMA4D-223ENST00000540475 ESYT2A0FGR8 921 aa15□□□□□ -0.01
SEMA4D-223ENST00000540475 MBLAC1A4D2B0 266 aaPredicted RBP15□□□□□ -0.01
SEMA4D-223ENST00000540475 SMCO2A6NFE2 343 aa15□□□□□ -0.01
SEMA4D-223ENST00000540475 GOLGA8AA7E2F4 631 aa15□□□□□ -0.01
SEMA4D-223ENST00000540475 GOLGA8BA8MQT2 603 aa15□□□□□ -0.01
SEMA4D-223ENST00000540475 MEIS1O00470 390 aa15□□□□□ -0.01
SEMA4D-223ENST00000540475 TLL1O43897 1013 aa15□□□□□ -0.01
SEMA4D-223ENST00000540475 SREBF1P36956 1147 aa15□□□□□ -0.01
SEMA4D-223ENST00000540475 CEP55Q53EZ4 464 aa15□□□□□ -0.01
SEMA4D-223ENST00000540475 Q6ZUG5 572 aa15□□□□□ -0.01
SEMA4D-223ENST00000540475 NIPA1Q7RTP0 329 aa15□□□□□ -0.01
SEMA4D-223ENST00000540475 DBF4BQ8NFT6 615 aa15□□□□□ -0.01
SEMA4D-223ENST00000540475 CYP2W1Q8TAV3 490 aa15□□□□□ -0.01
SEMA4D-223ENST00000540475 ATXN2LQ8WWM7 1075 aaKnown RBP15□□□□□ -0.01
SEMA4D-223ENST00000540475 RAD9AQ99638 391 aa15□□□□□ -0.01
SEMA4D-223ENST00000540475 SMARCAD1Q9H4L7 1026 aa15□□□□□ -0.01
SEMA4D-223ENST00000540475 MTCH2Q9Y6C9 303 aa15□□□□□ -0.01
SEMA4D-223ENST00000540475 COL4A4P53420 1690 aaPredicted RBP15□□□□□ -0.01
SEMA4D-223ENST00000540475 MYH9P35579 1960 aaKnown RBP14.99□□□□□ -0.01
SEMA4D-223ENST00000540475 EPOPA6NHQ4 379 aa14.99□□□□□ -0.01
SEMA4D-223ENST00000540475 PRPF3O43395 683 aaKnown RBP14.99□□□□□ -0.01
SEMA4D-223ENST00000540475 REC8O95072 547 aa14.99□□□□□ -0.01
SEMA4D-223ENST00000540475 ATG7O95352 703 aa14.99□□□□□ -0.01
SEMA4D-223ENST00000540475 CYP3A4P08684 503 aa14.99□□□□□ -0.01
SEMA4D-223ENST00000540475 CPA1P15085 419 aa14.99□□□□□ -0.01
SEMA4D-223ENST00000540475 RPS6KB1P23443 525 aa14.99□□□□□ -0.01
SEMA4D-223ENST00000540475 ADCY7P51828 1080 aa14.99□□□□□ -0.01
SEMA4D-223ENST00000540475 HTRA4P83105 476 aaPredicted RBP14.99□□□□□ -0.01
SEMA4D-223ENST00000540475 APOBRQ0VD83 1088 aa14.99□□□□□ -0.01
SEMA4D-223ENST00000540475 NTRK3Q16288 839 aa14.99□□□□□ -0.01
SEMA4D-223ENST00000540475 PKN1Q16512 942 aa14.99□□□□□ -0.01
SEMA4D-223ENST00000540475 MARCH8Q5T0T0 291 aa14.99□□□□□ -0.01
SEMA4D-223ENST00000540475 UTP14CQ5TAP6 766 aaKnown RBP14.99□□□□□ -0.01
SEMA4D-223ENST00000540475 BLOC1S2Q6QNY1 142 aa14.99□□□□□ -0.01
SEMA4D-223ENST00000540475 SYMPKQ92797 1274 aaKnown RBP14.99□□□□□ -0.01
SEMA4D-223ENST00000540475 JAKMIP1Q96N16 626 aaKnown RBP14.99□□□□□ -0.01
SEMA4D-223ENST00000540475 PCYT2Q99447 389 aa14.99□□□□□ -0.01
SEMA4D-223ENST00000540475 ANO3Q9BYT9 981 aa14.99□□□□□ -0.01
SEMA4D-223ENST00000540475 OSBPL7Q9BZF2 842 aa14.99□□□□□ -0.01
SEMA4D-223ENST00000540475 ZMYND12Q9H0C1 365 aa14.99□□□□□ -0.01
SEMA4D-223ENST00000540475 IGKV6D-21A0A0A0MT36 114 aa14.98□□□□□ -0.01
SEMA4D-223ENST00000540475 LCHNA4D1U4 455 aa14.98□□□□□ -0.01
SEMA4D-223ENST00000540475 LPXNO60711 386 aa14.98□□□□□ -0.01
SEMA4D-223ENST00000540475 SCG2P13521 617 aa14.98□□□□□ -0.01
SEMA4D-223ENST00000540475 IGFBP4P22692 258 aa14.98□□□□□ -0.01
SEMA4D-223ENST00000540475 METAP2P50579 478 aaKnown RBP eCLIP14.98□□□□□ -0.01
SEMA4D-223ENST00000540475 MGAT3Q09327 533 aa14.98□□□□□ -0.01
SEMA4D-223ENST00000540475 TJAP1Q5JTD0 557 aa14.98□□□□□ -0.01
SEMA4D-223ENST00000540475 MCTP2Q6DN12 878 aa14.98□□□□□ -0.01
SEMA4D-223ENST00000540475 TAF2Q6P1X5 1199 aa14.98□□□□□ -0.01
SEMA4D-223ENST00000540475 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.98□□□□□ -0.01
SEMA4D-223ENST00000540475 PLPPR4Q7Z2D5 763 aa14.98□□□□□ -0.01
SEMA4D-223ENST00000540475 TMCO2Q7Z6W1 182 aaPredicted RBP14.98□□□□□ -0.01
SEMA4D-223ENST00000540475 SP7Q8TDD2 431 aaPredicted RBP14.98□□□□□ -0.01
SEMA4D-223ENST00000540475 BRF1Q92994 677 aa14.98□□□□□ -0.01
SEMA4D-223ENST00000540475 AGO4Q9HCK5 861 aaKnown RBP14.98□□□□□ -0.01
SEMA4D-223ENST00000540475 JPH1Q9HDC5 661 aaPredicted RBP14.98□□□□□ -0.01
SEMA4D-223ENST00000540475 PRDM6Q9NQX0 595 aa14.98□□□□□ -0.01
SEMA4D-223ENST00000540475 LMCD1Q9NZU5 365 aa14.98□□□□□ -0.01
SEMA4D-223ENST00000540475 SLC9A2Q9UBY0 812 aa14.98□□□□□ -0.01
SEMA4D-223ENST00000540475 TTC28Q96AY4 2481 aa14.98□□□□□ -0.01
SEMA4D-223ENST00000540475 RALGAPA2Q2PPJ7 1873 aa14.97□□□□□ -0.01
SEMA4D-223ENST00000540475 NLRC5Q86WI3 1866 aa14.97□□□□□ -0.01
SEMA4D-223ENST00000540475 RFXAPO00287 272 aa14.97□□□□□ -0.01
SEMA4D-223ENST00000540475 CHRNA1P02708 482 aa14.97□□□□□ -0.01
SEMA4D-223ENST00000540475 RPLP2P05387 115 aaKnown RBP14.97□□□□□ -0.01
SEMA4D-223ENST00000540475 ARP10275 920 aa14.97□□□□□ -0.01
SEMA4D-223ENST00000540475 PSMA5P28066 241 aa14.97□□□□□ -0.01
SEMA4D-223ENST00000540475 ERVK-21P61565 698 aa14.97□□□□□ -0.01
SEMA4D-223ENST00000540475 ARHGAP4P98171 946 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms