RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 GRAMD1AQ96CP6 724 aa6.68□□□□□ -1.34
SNHG1-211ENST00000539921 TLCD1Q96CP7 247 aa6.68□□□□□ -1.34
SNHG1-211ENST00000539921 PGM2Q96G03 612 aa6.68□□□□□ -1.34
SNHG1-211ENST00000539921 SNF8Q96H20 258 aa6.68□□□□□ -1.34
SNHG1-211ENST00000539921 NEK1Q96PY6 1258 aa6.68□□□□□ -1.34
SNHG1-211ENST00000539921 FAM167BQ9BTA0 163 aa6.68□□□□□ -1.34
SNHG1-211ENST00000539921 TMEM121BQ9BXQ6 578 aaPredicted RBP6.68□□□□□ -1.34
SNHG1-211ENST00000539921 AGXT2Q9BYV1 514 aa6.68□□□□□ -1.34
SNHG1-211ENST00000539921 NACAP1Q9BZK3 213 aa6.68□□□□□ -1.34
SNHG1-211ENST00000539921 STMN4Q9H169 189 aaPredicted RBP6.68□□□□□ -1.34
SNHG1-211ENST00000539921 ESF1Q9H501 851 aaKnown RBP6.68□□□□□ -1.34
SNHG1-211ENST00000539921 THAP9Q9H5L6 903 aa6.68□□□□□ -1.34
SNHG1-211ENST00000539921 RXFP1Q9HBX9 757 aa6.68□□□□□ -1.34
SNHG1-211ENST00000539921 AIPL1Q9NZN9 384 aa6.68□□□□□ -1.34
SNHG1-211ENST00000539921 STK17AQ9UEE5 414 aa6.68□□□□□ -1.34
SNHG1-211ENST00000539921 SNX12Q9UMY4 172 aa6.68□□□□□ -1.34
SNHG1-211ENST00000539921 RABL2BQ9UNT1 228 aa6.68□□□□□ -1.34
SNHG1-211ENST00000539921 SATB2Q9UPW6 733 aa6.68□□□□□ -1.34
SNHG1-211ENST00000539921 HYOU1Q9Y4L1 999 aa6.68□□□□□ -1.34
SNHG1-211ENST00000539921 SPO11Q9Y5K1 396 aa6.68□□□□□ -1.34
SNHG1-211ENST00000539921 PNPLA7Q6ZV29 1317 aa6.68□□□□□ -1.34
SNHG1-211ENST00000539921 MINK1Q8N4C8 1332 aaPredicted RBP6.68□□□□□ -1.34
SNHG1-211ENST00000539921 DEPDC5O75140 1603 aa6.68□□□□□ -1.34
SNHG1-211ENST00000539921 A0A088AWK7 358 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 IGF2BP3O00425 579 aaKnown RBP eCLIP6.67□□□□□ -1.34
SNHG1-211ENST00000539921 SPTLC2O15270 562 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 AP1G1O43747 822 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 PEX11AO75192 247 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 TBCAO75347 108 aaKnown RBP6.67□□□□□ -1.34
SNHG1-211ENST00000539921 SERPINB7O75635 380 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 NDUFA10O95299 355 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 EYA4O95677 639 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 ZFYP08048 801 aaPredicted RBP6.67□□□□□ -1.34
SNHG1-211ENST00000539921 S100A5P33763 92 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 CYLC1P35663 651 aaPredicted RBP6.67□□□□□ -1.34
SNHG1-211ENST00000539921 PAFAH1B1P43034 410 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 SERPINB4P48594 390 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 PLCD1P51178 756 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 GUCY2FP51841 1108 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 ADKP55263 362 aaKnown RBP6.67□□□□□ -1.34
SNHG1-211ENST00000539921 ADARP55265 1226 aaKnown RBP6.67□□□□□ -1.34
SNHG1-211ENST00000539921 CTAG1AP78358 180 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 ITGA7Q13683 1181 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 TOB2Q14106 344 aaPredicted RBP6.67□□□□□ -1.34
SNHG1-211ENST00000539921 EIF4A2Q14240 407 aaKnown RBP6.67□□□□□ -1.34
SNHG1-211ENST00000539921 COL19A1Q14993 1142 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 MEA1Q16626 185 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 QPCTQ16769 361 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 MUM1Q2TAK8 710 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 RASIP1Q5U651 963 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 RNF220Q5VTB9 566 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 CDKAL1Q5VV42 579 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 FOXB2Q5VYV0 432 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 HAUS3Q68CZ6 603 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 RNF43Q68DV7 783 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 C8orf74Q6P047 294 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 FAM173BQ6P4H8 233 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 BORAQ6PGQ7 559 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 MARK2Q7KZI7 788 aaKnown RBP6.67□□□□□ -1.34
SNHG1-211ENST00000539921 APTXQ7Z2E3 356 aaKnown RBP6.67□□□□□ -1.34
SNHG1-211ENST00000539921 DDX42Q86XP3 938 aaKnown RBP eCLIP6.67□□□□□ -1.347e-6■■■□□ 16.5
SNHG1-211ENST00000539921 NELFCDQ8IXH7 590 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 ST13P4Q8IZP2 240 aaPredicted RBP6.67□□□□□ -1.34
SNHG1-211ENST00000539921 STK11IPQ8N1F8 1099 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 TSPYL6Q8N831 410 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 SPATA4Q8NEY3 305 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 CCDC110Q8TBZ0 833 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 CASP10Q92851 521 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 CCDC43Q96MW1 224 aaKnown RBP6.67□□□□□ -1.34
SNHG1-211ENST00000539921 DNAJC7Q99615 494 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 CCT7Q99832 543 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 HGH1Q9BTY7 390 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 DDX47Q9H0S4 455 aaKnown RBP6.67□□□□□ -1.34
SNHG1-211ENST00000539921 DPH5Q9H2P9 285 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 TLE6Q9H808 572 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 METTL14Q9HCE5 456 aaKnown RBP6.67□□□□□ -1.34
SNHG1-211ENST00000539921 PPANQ9NQ55 473 aaKnown RBP6.67□□□□□ -1.34
SNHG1-211ENST00000539921 ABHD10Q9NUJ1 306 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 PLK2Q9NYY3 685 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 THEGQ9P2T0 379 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 BIN2Q9UBW5 565 aaPredicted RBP6.67□□□□□ -1.34
SNHG1-211ENST00000539921 ADD3Q9UEY8 706 aaKnown RBP6.67□□□□□ -1.34
SNHG1-211ENST00000539921 INTUQ9ULD6 942 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 USP20Q9Y2K6 914 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 STXBP5LQ9Y2K9 1186 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 N6AMT1Q9Y5N5 214 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 SNX9Q9Y5X1 595 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 EPN1Q9Y6I3 576 aaPredicted RBP6.67□□□□□ -1.34
SNHG1-211ENST00000539921 CAPN6Q9Y6Q1 641 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 MST1RQ04912 1400 aa6.67□□□□□ -1.34
SNHG1-211ENST00000539921 SETD1BQ9UPS6 1966 aaKnown RBP6.66□□□□□ -1.34
SNHG1-211ENST00000539921 A0A1W2PQC6 194 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 E9PBE3 544 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 H0YGN5 161 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 SNX3O60493 162 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 DIAPH1O60610 1272 aaKnown RBP6.66□□□□□ -1.34
SNHG1-211ENST00000539921 TACC1O75410 805 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 UNC5CO95185 931 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 ZBED1O96006 694 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 KRT14P02533 472 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms