RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 ERICH2A1L162 156 aa17.24■□□□□ 0.35
USB1-203ENST00000539737 E7EWF7 191 aa17.24■□□□□ 0.35
USB1-203ENST00000539737 ZBTB5O15062 677 aa17.24■□□□□ 0.35
USB1-203ENST00000539737 GHRP10912 638 aa17.24■□□□□ 0.35
USB1-203ENST00000539737 CCND2P30279 289 aa17.24■□□□□ 0.35
USB1-203ENST00000539737 HOXC8P31273 242 aa17.24■□□□□ 0.35
USB1-203ENST00000539737 ARHGAP4P98171 946 aa17.24■□□□□ 0.35
USB1-203ENST00000539737 FBXL18Q96ME1 805 aa17.24■□□□□ 0.35
USB1-203ENST00000539737 IGFLR1Q9H665 355 aa17.24■□□□□ 0.35
USB1-203ENST00000539737 MUTYHQ9UIF7 546 aa17.24■□□□□ 0.35
USB1-203ENST00000539737 POTEB3A0JP26 581 aa17.23■□□□□ 0.35
USB1-203ENST00000539737 SLC27A2O14975 620 aa17.23■□□□□ 0.35
USB1-203ENST00000539737 DCXO43602 365 aa17.23■□□□□ 0.35
USB1-203ENST00000539737 CHRNA1P02708 482 aa17.23■□□□□ 0.35
USB1-203ENST00000539737 IBSPP21815 317 aaPredicted RBP17.23■□□□□ 0.35
USB1-203ENST00000539737 IRS1P35568 1242 aa17.23■□□□□ 0.35
USB1-203ENST00000539737 GHRHRQ02643 423 aa17.23■□□□□ 0.35
USB1-203ENST00000539737 HYAL1Q12794 435 aa17.23■□□□□ 0.35
USB1-203ENST00000539737 TIGD5Q53EQ6 642 aa17.23■□□□□ 0.35
USB1-203ENST00000539737 CREB3L3Q68CJ9 461 aa17.23■□□□□ 0.35
USB1-203ENST00000539737 POTEBQ6S5H4 581 aa17.23■□□□□ 0.35
USB1-203ENST00000539737 HFE2Q6ZVN8 426 aa17.23■□□□□ 0.35
USB1-203ENST00000539737 LMBR1Q8WVP7 490 aa17.23■□□□□ 0.35
USB1-203ENST00000539737 PABPC5Q96DU9 382 aaKnown RBP17.23■□□□□ 0.35
USB1-203ENST00000539737 GPR20Q99678 358 aa17.23■□□□□ 0.35
USB1-203ENST00000539737 MAF1Q9H063 256 aa17.23■□□□□ 0.35
USB1-203ENST00000539737 NSUN3Q9H649 340 aaKnown RBP17.23■□□□□ 0.35
USB1-203ENST00000539737 PKD2L1Q9P0L9 805 aa17.23■□□□□ 0.35
USB1-203ENST00000539737 PCDHGC5Q9Y5F6 944 aa17.23■□□□□ 0.35
USB1-203ENST00000539737 RALGAPA2Q2PPJ7 1873 aa17.22■□□□□ 0.35
USB1-203ENST00000539737 TECTAO75443 2155 aa17.22■□□□□ 0.35
USB1-203ENST00000539737 KIAA1671Q9BY89 1806 aa17.22■□□□□ 0.35
USB1-203ENST00000539737 PALM3A6NDB9 673 aaPredicted RBP17.22■□□□□ 0.35
USB1-203ENST00000539737 GCOM1H8Y6P7 765 aaPredicted RBP17.22■□□□□ 0.35
USB1-203ENST00000539737 NOP56O00567 594 aaKnown RBP17.22■□□□□ 0.35
USB1-203ENST00000539737 TBX10O75333 385 aa17.22■□□□□ 0.35
USB1-203ENST00000539737 POLR2MP0CAP2 368 aa17.22■□□□□ 0.35
USB1-203ENST00000539737 MARK3P27448 753 aa17.22■□□□□ 0.35
USB1-203ENST00000539737 MRE11P49959 708 aa17.22■□□□□ 0.35
USB1-203ENST00000539737 NHLH1Q02575 133 aa17.22■□□□□ 0.35
USB1-203ENST00000539737 SART3Q15020 963 aaKnown RBP17.22■□□□□ 0.35
USB1-203ENST00000539737 NECTIN1Q15223 517 aa17.22■□□□□ 0.35
USB1-203ENST00000539737 PTPROQ16827 1216 aa17.22■□□□□ 0.35
USB1-203ENST00000539737 CSPP1Q1MSJ5 1256 aa17.22■□□□□ 0.35
USB1-203ENST00000539737 ARIH1Q9Y4X5 557 aaPredicted RBP17.22■□□□□ 0.35
USB1-203ENST00000539737 EPB41L2O43491 1005 aaKnown RBP17.21■□□□□ 0.35
USB1-203ENST00000539737 GATMP50440 423 aa17.21■□□□□ 0.35
USB1-203ENST00000539737 GRM4Q14833 912 aa17.21■□□□□ 0.35
USB1-203ENST00000539737 LINC01599Q8WXQ3 324 aa17.21■□□□□ 0.35
USB1-203ENST00000539737 MYL10Q9BUA6 226 aa17.21■□□□□ 0.35
USB1-203ENST00000539737 ALG13Q9NP73 1137 aaKnown RBP17.21■□□□□ 0.35
USB1-203ENST00000539737 DNAJB1P25685 340 aa17.2■□□□□ 0.34
USB1-203ENST00000539737 TRAF1Q13077 416 aa17.2■□□□□ 0.34
USB1-203ENST00000539737 COL9A3Q14050 684 aaPredicted RBP17.2■□□□□ 0.34
USB1-203ENST00000539737 LPIN1Q14693 890 aa17.2■□□□□ 0.34
USB1-203ENST00000539737 USP17L6PQ6QN14 398 aa17.2■□□□□ 0.34
USB1-203ENST00000539737 ADGRD2Q7Z7M1 963 aa17.2■□□□□ 0.34
USB1-203ENST00000539737 MB21D2Q8IYB1 491 aaPredicted RBP17.2■□□□□ 0.34
USB1-203ENST00000539737 FIBCD1Q8N539 461 aa17.2■□□□□ 0.34
USB1-203ENST00000539737 C19orf67A6NJJ6 358 aa17.19■□□□□ 0.34
USB1-203ENST00000539737 SPATA31C2B4DYI2 1134 aa17.19■□□□□ 0.34
USB1-203ENST00000539737 EIF5BO60841 1220 aaKnown RBP17.19■□□□□ 0.34
USB1-203ENST00000539737 ATP9AO75110 1047 aa17.19■□□□□ 0.34
USB1-203ENST00000539737 ALADP13716 330 aa17.19■□□□□ 0.34
USB1-203ENST00000539737 ADAM17P78536 824 aa17.19■□□□□ 0.34
USB1-203ENST00000539737 CAMK1Q14012 370 aa17.19■□□□□ 0.34
USB1-203ENST00000539737 KRT32Q14532 448 aa17.19■□□□□ 0.34
USB1-203ENST00000539737 COL19A1Q14993 1142 aa17.19■□□□□ 0.34
USB1-203ENST00000539737 IL17RAQ96F46 866 aa17.19■□□□□ 0.34
USB1-203ENST00000539737 MTA3Q9BTC8 594 aa17.19■□□□□ 0.34
USB1-203ENST00000539737 RIOX1Q9H6W3 641 aa17.19■□□□□ 0.34
USB1-203ENST00000539737 IFIT3O14879 490 aaKnown RBP17.18■□□□□ 0.34
USB1-203ENST00000539737 MBTPS2O43462 519 aa17.18■□□□□ 0.34
USB1-203ENST00000539737 MCM5P33992 734 aa17.18■□□□□ 0.34
USB1-203ENST00000539737 IGBP1P78318 339 aa17.18■□□□□ 0.34
USB1-203ENST00000539737 RBM10P98175 930 aaKnown RBP17.18■□□□□ 0.34
USB1-203ENST00000539737 MGAT3Q09327 533 aa17.18■□□□□ 0.34
USB1-203ENST00000539737 TMEM62Q0P6H9 643 aa17.18■□□□□ 0.34
USB1-203ENST00000539737 PAN2Q504Q3 1202 aaKnown RBP17.18■□□□□ 0.34
USB1-203ENST00000539737 KCNV1Q6PIU1 500 aa17.18■□□□□ 0.34
USB1-203ENST00000539737 METTL7BQ6UX53 244 aa17.18■□□□□ 0.34
USB1-203ENST00000539737 RAB11FIP4Q86YS3 637 aa17.18■□□□□ 0.34
USB1-203ENST00000539737 ADHFE1Q8IWW8 467 aa17.18■□□□□ 0.34
USB1-203ENST00000539737 CMTR1Q8N1G2 835 aaKnown RBP17.18■□□□□ 0.34
USB1-203ENST00000539737 SAMD11Q96NU1 681 aa17.18■□□□□ 0.34
USB1-203ENST00000539737 INPP4AQ96PE3 977 aaPredicted RBP17.18■□□□□ 0.34
USB1-203ENST00000539737 AGO3Q9H9G7 860 aaKnown RBP17.18■□□□□ 0.34
USB1-203ENST00000539737 RC3H2Q9HBD1 1191 aaKnown RBP17.18■□□□□ 0.34
USB1-203ENST00000539737 ADGRA3Q8IWK6 1321 aa17.18■□□□□ 0.34
USB1-203ENST00000539737 KAT6AQ92794 2004 aa17.18■□□□□ 0.34
USB1-203ENST00000539737 hCG_1642624A0A1W2PR95 340 aa17.17■□□□□ 0.34
USB1-203ENST00000539737 BMPR1AP36894 532 aa17.17■□□□□ 0.34
USB1-203ENST00000539737 WTAPQ15007 396 aa17.17■□□□□ 0.34
USB1-203ENST00000539737 CTC1Q2NKJ3 1217 aa17.17■□□□□ 0.34
USB1-203ENST00000539737 TSGA10IPQ3SY00 556 aa17.17■□□□□ 0.34
USB1-203ENST00000539737 FAM26DQ5JW98 314 aa17.17■□□□□ 0.34
USB1-203ENST00000539737 DNAJB3Q8WWF6 145 aa17.17■□□□□ 0.34
USB1-203ENST00000539737 MRPL42Q9Y6G3 142 aaKnown RBP17.17■□□□□ 0.34
USB1-203ENST00000539737 LOXHD1Q8IVV2 1947 aa17.17■□□□□ 0.34
USB1-203ENST00000539737 FRMPD4Q14CM0 1322 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms