RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 RRP1BQ14684 758 aaKnown RBP15.53■□□□□ 0.08
UBE3B-210ENST00000539599 DNAJC21Q5F1R6 531 aaKnown RBP15.53■□□□□ 0.08
UBE3B-210ENST00000539599 SP8Q8IXZ3 490 aa15.53■□□□□ 0.08
UBE3B-210ENST00000539599 TRIM58Q8NG06 486 aa15.53■□□□□ 0.08
UBE3B-210ENST00000539599 TEKT1Q969V4 418 aa15.53■□□□□ 0.08
UBE3B-210ENST00000539599 EMILIN3Q9NT22 766 aa15.53■□□□□ 0.08
UBE3B-210ENST00000539599 RGL1Q9NZL6 768 aa15.53■□□□□ 0.08
UBE3B-210ENST00000539599 AJAP1Q9UKB5 411 aaPredicted RBP15.53■□□□□ 0.08
UBE3B-210ENST00000539599 CLIC2O15247 247 aa15.52■□□□□ 0.08
UBE3B-210ENST00000539599 PALMO75781 387 aa15.52■□□□□ 0.08
UBE3B-210ENST00000539599 IRX5P78411 483 aaPredicted RBP15.52■□□□□ 0.08
UBE3B-210ENST00000539599 CKAP4Q07065 602 aaKnown RBP15.52■□□□□ 0.08
UBE3B-210ENST00000539599 GPS2Q13227 327 aa15.52■□□□□ 0.08
UBE3B-210ENST00000539599 COBLL1Q53SF7 1204 aa15.52■□□□□ 0.08
UBE3B-210ENST00000539599 CRAMP1Q96RY5 1269 aa15.52■□□□□ 0.08
UBE3B-210ENST00000539599 GBP3Q9H0R5 595 aa15.52■□□□□ 0.08
UBE3B-210ENST00000539599 FAM198AQ9UFP1 575 aa15.52■□□□□ 0.08
UBE3B-210ENST00000539599 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.52■□□□□ 0.08
UBE3B-210ENST00000539599 FOCADQ5VW36 1801 aa15.52■□□□□ 0.07
UBE3B-210ENST00000539599 HLA-DOAP06340 250 aa15.52■□□□□ 0.07
UBE3B-210ENST00000539599 HOXD13P35453 343 aa15.52■□□□□ 0.07
UBE3B-210ENST00000539599 CASP4P49662 377 aa15.52■□□□□ 0.07
UBE3B-210ENST00000539599 CDK17Q00537 523 aa15.52■□□□□ 0.07
UBE3B-210ENST00000539599 SFR1Q86XK3 245 aa15.52■□□□□ 0.07
UBE3B-210ENST00000539599 TSEN2Q8NCE0 465 aaKnown RBP15.52■□□□□ 0.07
UBE3B-210ENST00000539599 KCTD10Q9H3F6 313 aa15.52■□□□□ 0.07
UBE3B-210ENST00000539599 ANO9A1A5B4 782 aa15.51■□□□□ 0.07
UBE3B-210ENST00000539599 CHMP2AO43633 222 aa15.51■□□□□ 0.07
UBE3B-210ENST00000539599 NR2F2P24468 414 aa15.51■□□□□ 0.07
UBE3B-210ENST00000539599 CERKLQ49MI3 558 aaPredicted RBP15.51■□□□□ 0.07
UBE3B-210ENST00000539599 DCAF17Q5H9S7 520 aaPredicted RBP15.51■□□□□ 0.07
UBE3B-210ENST00000539599 CCDC84Q86UT8 332 aaPredicted RBP15.51■□□□□ 0.07
UBE3B-210ENST00000539599 CERS3Q8IU89 383 aa15.51■□□□□ 0.07
UBE3B-210ENST00000539599 PIGOQ8TEQ8 1089 aa15.51■□□□□ 0.07
UBE3B-210ENST00000539599 REEP2Q9BRK0 252 aa15.51■□□□□ 0.07
UBE3B-210ENST00000539599 A0A0U1RQG5 324 aaPredicted RBP15.51■□□□□ 0.07
UBE3B-210ENST00000539599 TULP1O00294 542 aaPredicted RBP15.51■□□□□ 0.07
UBE3B-210ENST00000539599 ARHGAP4P98171 946 aa15.51■□□□□ 0.07
UBE3B-210ENST00000539599 CCDC181Q5TID7 509 aa15.51■□□□□ 0.07
UBE3B-210ENST00000539599 SFMBT2Q5VUG0 894 aa15.51■□□□□ 0.07
UBE3B-210ENST00000539599 HAUS3Q68CZ6 603 aa15.51■□□□□ 0.07
UBE3B-210ENST00000539599 ZNF662Q6ZS27 426 aa15.51■□□□□ 0.07
UBE3B-210ENST00000539599 KCNMB3Q9NPA1 279 aa15.51■□□□□ 0.07
UBE3B-210ENST00000539599 hCG_1984214I3L0E3 225 aa15.5■□□□□ 0.07
UBE3B-210ENST00000539599 ADRA2BP18089 450 aa15.5■□□□□ 0.07
UBE3B-210ENST00000539599 SLC12A3P55017 1021 aa15.5■□□□□ 0.07
UBE3B-210ENST00000539599 KCNH2Q12809 1159 aa15.5■□□□□ 0.07
UBE3B-210ENST00000539599 TRIM59Q8IWR1 403 aa15.5■□□□□ 0.07
UBE3B-210ENST00000539599 ZNF713Q8N859 430 aaPredicted RBP15.5■□□□□ 0.07
UBE3B-210ENST00000539599 FAM71BQ8TC56 605 aa15.5■□□□□ 0.07
UBE3B-210ENST00000539599 SCAF8Q9UPN6 1271 aaKnown RBP15.5■□□□□ 0.07
UBE3B-210ENST00000539599 SPATA31C1P0DKV0 1188 aa15.5■□□□□ 0.07
UBE3B-210ENST00000539599 ACTN2P35609 894 aa15.5■□□□□ 0.07
UBE3B-210ENST00000539599 PPP1R2P41236 205 aa15.5■□□□□ 0.07
UBE3B-210ENST00000539599 NT5C2P49902 561 aa15.5■□□□□ 0.07
UBE3B-210ENST00000539599 ICA1Q05084 483 aa15.5■□□□□ 0.07
UBE3B-210ENST00000539599 SPIRE1Q08AE8 756 aa15.5■□□□□ 0.07
UBE3B-210ENST00000539599 GPATCH4Q5T3I0 446 aaKnown RBP15.5■□□□□ 0.07
UBE3B-210ENST00000539599 TCERG1LQ5VWI1 586 aa15.5■□□□□ 0.07
UBE3B-210ENST00000539599 RUSC1Q9BVN2 902 aa15.5■□□□□ 0.07
UBE3B-210ENST00000539599 TSGA10Q9BZW7 698 aa15.5■□□□□ 0.07
UBE3B-210ENST00000539599 DHX36Q9H2U1 1008 aaKnown RBP15.5■□□□□ 0.07
UBE3B-210ENST00000539599 TDRD3Q9H7E2 651 aaKnown RBP15.5■□□□□ 0.07
UBE3B-210ENST00000539599 LTBP1Q14766 1721 aa15.5■□□□□ 0.07
UBE3B-210ENST00000539599 F5H6K3 240 aa15.49■□□□□ 0.07
UBE3B-210ENST00000539599 EML1O00423 815 aa15.49■□□□□ 0.07
UBE3B-210ENST00000539599 LCA5LO95447 670 aa15.49■□□□□ 0.07
UBE3B-210ENST00000539599 KLRC3Q07444 240 aa15.49■□□□□ 0.07
UBE3B-210ENST00000539599 CCDC65Q8IXS2 484 aa15.49■□□□□ 0.07
UBE3B-210ENST00000539599 BMP2KQ9NSY1 1161 aaPredicted RBP15.49■□□□□ 0.07
UBE3B-210ENST00000539599 SWAP70Q9UH65 585 aa15.49■□□□□ 0.07
UBE3B-210ENST00000539599 HYOU1Q9Y4L1 999 aa15.49■□□□□ 0.07
UBE3B-210ENST00000539599 GLI1P08151 1106 aa15.49■□□□□ 0.07
UBE3B-210ENST00000539599 FAM153BP0C7A2 387 aa15.49■□□□□ 0.07
UBE3B-210ENST00000539599 EPS15P42566 896 aa15.49■□□□□ 0.07
UBE3B-210ENST00000539599 ECE1P42892 770 aa15.49■□□□□ 0.07
UBE3B-210ENST00000539599 FAM153CQ494X1 144 aa15.49■□□□□ 0.07
UBE3B-210ENST00000539599 COL23A1Q86Y22 540 aaPredicted RBP15.49■□□□□ 0.07
UBE3B-210ENST00000539599 LENG9Q96B70 501 aa15.49■□□□□ 0.07
UBE3B-210ENST00000539599 ALS2CR12Q96Q35 445 aa15.49■□□□□ 0.07
UBE3B-210ENST00000539599 BHMT2Q9H2M3 363 aa15.49■□□□□ 0.07
UBE3B-210ENST00000539599 FAM153AQ9UHL3 310 aa15.49■□□□□ 0.07
UBE3B-210ENST00000539599 ANKRD31Q8N7Z5 1873 aa15.48■□□□□ 0.07
UBE3B-210ENST00000539599 A0A1W2PRG0 241 aa15.48■□□□□ 0.07
UBE3B-210ENST00000539599 OPLAHO14841 1288 aa15.48■□□□□ 0.07
UBE3B-210ENST00000539599 NDUFB10O96000 172 aa15.48■□□□□ 0.07
UBE3B-210ENST00000539599 ORC2Q13416 577 aaPredicted RBP15.48■□□□□ 0.07
UBE3B-210ENST00000539599 GIT2Q14161 759 aa15.48■□□□□ 0.07
UBE3B-210ENST00000539599 CTTNQ14247 550 aaKnown RBP15.48■□□□□ 0.07
UBE3B-210ENST00000539599 ZYXQ15942 572 aaKnown RBP15.48■□□□□ 0.07
UBE3B-210ENST00000539599 KIAA0753Q2KHM9 967 aa15.48■□□□□ 0.07
UBE3B-210ENST00000539599 SLC9C1Q4G0N8 1177 aa15.48■□□□□ 0.07
UBE3B-210ENST00000539599 KIAA1755Q5JYT7 1200 aa15.48■□□□□ 0.07
UBE3B-210ENST00000539599 LRRC31Q6UY01 552 aa15.48■□□□□ 0.07
UBE3B-210ENST00000539599 TRMT1LQ7Z2T5 733 aaKnown RBP15.48■□□□□ 0.07
UBE3B-210ENST00000539599 ETNPPLQ8TBG4 499 aa15.48■□□□□ 0.07
UBE3B-210ENST00000539599 IFT81Q8WYA0 676 aa15.48■□□□□ 0.07
UBE3B-210ENST00000539599 CEP72Q9P209 647 aa15.48■□□□□ 0.07
UBE3B-210ENST00000539599 AKAP3O75969 853 aa15.48■□□□□ 0.07
UBE3B-210ENST00000539599 FGFR1OPO95684 399 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms