RNA–Protein interactions for RNA: ENST00000539019.1

SSPN-206, Transcript of sarcospan, humanhuman

TSL 1 (best)

Gene SSPN, Length 1,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-206ENST00000539019 MARCH2Q9P0N8 246 aa7.26□□□□□ -1.25
SSPN-206ENST00000539019 TECPR2O15040 1411 aa7.26□□□□□ -1.25
SSPN-206ENST00000539019 GPRASP1Q5JY77 1395 aa7.26□□□□□ -1.25
SSPN-206ENST00000539019 PIK3R4Q99570 1358 aa7.26□□□□□ -1.25
SSPN-206ENST00000539019 PPLO60437 1756 aa7.25□□□□□ -1.25
SSPN-206ENST00000539019 ZBTB7AO95365 584 aa7.25□□□□□ -1.25
SSPN-206ENST00000539019 HOXC12P31275 282 aa7.25□□□□□ -1.25
SSPN-206ENST00000539019 ARID5AQ03989 594 aa7.25□□□□□ -1.25
SSPN-206ENST00000539019 MRM1Q6IN84 353 aaKnown RBP7.25□□□□□ -1.25
SSPN-206ENST00000539019 B3GNT8Q7Z7M8 397 aa7.25□□□□□ -1.25
SSPN-206ENST00000539019 ZNF227Q86WZ6 799 aa7.25□□□□□ -1.25
SSPN-206ENST00000539019 MCF2L2Q86YR7 1114 aa7.25□□□□□ -1.25
SSPN-206ENST00000539019 ADGRG2Q8IZP9 1017 aa7.25□□□□□ -1.25
SSPN-206ENST00000539019 BTG4Q9NY30 223 aa7.25□□□□□ -1.25
SSPN-206ENST00000539019 TMEFF2Q9UIK5 374 aaPredicted RBP7.25□□□□□ -1.25
SSPN-206ENST00000539019 PMF1-BGLAPU3KQ54 211 aa7.25□□□□□ -1.25
SSPN-206ENST00000539019 ALKQ9UM73 1620 aa7.25□□□□□ -1.25
SSPN-206ENST00000539019 NWD1Q149M9 1564 aa7.24□□□□□ -1.25
SSPN-206ENST00000539019 PRRG2O14669 202 aa7.24□□□□□ -1.25
SSPN-206ENST00000539019 KCNA6P17658 529 aa7.24□□□□□ -1.25
SSPN-206ENST00000539019 ECI1P42126 302 aa7.24□□□□□ -1.25
SSPN-206ENST00000539019 HTRA3P83110 453 aa7.24□□□□□ -1.25
SSPN-206ENST00000539019 SF1Q15637 639 aaKnown RBP7.24□□□□□ -1.25
SSPN-206ENST00000539019 VWA3BQ502W6 1294 aa7.24□□□□□ -1.25
SSPN-206ENST00000539019 IQCEQ6IPM2 695 aa7.24□□□□□ -1.25
SSPN-206ENST00000539019 TEX2Q8IWB9 1127 aa7.24□□□□□ -1.25
SSPN-206ENST00000539019 SP8Q8IXZ3 490 aa7.24□□□□□ -1.25
SSPN-206ENST00000539019 LUC7LQ9NQ29 371 aaKnown RBP7.24□□□□□ -1.25
SSPN-206ENST00000539019 EID1Q9Y6B2 187 aa7.24□□□□□ -1.25
SSPN-206ENST00000539019 STRCP1A6NGW2 1772 aa7.24□□□□□ -1.25
SSPN-206ENST00000539019 ABCC11Q96J66 1382 aa7.24□□□□□ -1.25
SSPN-206ENST00000539019 NCANO14594 1321 aa7.24□□□□□ -1.25
SSPN-206ENST00000539019 IQGAP1P46940 1657 aa7.23□□□□□ -1.25
SSPN-206ENST00000539019 LRRC7Q96NW7 1537 aa7.23□□□□□ -1.25
SSPN-206ENST00000539019 A0A1B0GTL3 188 aa7.23□□□□□ -1.25
SSPN-206ENST00000539019 GJB6O95452 261 aa7.23□□□□□ -1.25
SSPN-206ENST00000539019 SNRPB2P08579 225 aaKnown RBP7.23□□□□□ -1.25
SSPN-206ENST00000539019 DNAJA1P31689 397 aaKnown RBP7.23□□□□□ -1.25
SSPN-206ENST00000539019 SLURP1P55000 103 aa7.23□□□□□ -1.25
SSPN-206ENST00000539019 CCDC103Q8IW40 242 aa7.23□□□□□ -1.25
SSPN-206ENST00000539019 KREMEN2Q8NCW0 462 aa7.23□□□□□ -1.25
SSPN-206ENST00000539019 ZNF526Q8TF50 670 aaPredicted RBP7.23□□□□□ -1.25
SSPN-206ENST00000539019 CPA5Q8WXQ8 436 aa7.23□□□□□ -1.25
SSPN-206ENST00000539019 TIMM13Q9Y5L4 95 aaPredicted RBP7.23□□□□□ -1.25
SSPN-206ENST00000539019 LRPPRCP42704 1394 aaKnown RBP7.23□□□□□ -1.25
SSPN-206ENST00000539019 DIP2AQ14689 1571 aa7.23□□□□□ -1.25
SSPN-206ENST00000539019 XRN1Q8IZH2 1706 aaKnown RBP7.22□□□□□ -1.25
SSPN-206ENST00000539019 C22orf46C9J442 243 aa7.22□□□□□ -1.25
SSPN-206ENST00000539019 FOXD2O60548 495 aaPredicted RBP7.22□□□□□ -1.25
SSPN-206ENST00000539019 SCG5P05408 212 aa7.22□□□□□ -1.25
SSPN-206ENST00000539019 KCNC1P48547 511 aa7.22□□□□□ -1.25
SSPN-206ENST00000539019 RBM25P49756 843 aaKnown RBP7.22□□□□□ -1.25
SSPN-206ENST00000539019 CACNB2Q08289 660 aaPredicted RBP7.22□□□□□ -1.25
SSPN-206ENST00000539019 NFIXQ14938 502 aa7.22□□□□□ -1.25
SSPN-206ENST00000539019 PRSS53Q2L4Q9 553 aa7.22□□□□□ -1.25
SSPN-206ENST00000539019 E4F1Q66K89 784 aaPredicted RBP7.22□□□□□ -1.25
SSPN-206ENST00000539019 SAPCD2Q86UD0 394 aa7.22□□□□□ -1.25
SSPN-206ENST00000539019 SMARCC2Q8TAQ2 1214 aa7.22□□□□□ -1.25
SSPN-206ENST00000539019 DIO2Q92813 273 aa7.22□□□□□ -1.25
SSPN-206ENST00000539019 NOX5Q96PH1 765 aa7.22□□□□□ -1.25
SSPN-206ENST00000539019 RTEL1Q9NZ71 1219 aa7.22□□□□□ -1.25
SSPN-206ENST00000539019 PTCH1Q13635 1447 aa7.22□□□□□ -1.25
SSPN-206ENST00000539019 POLR1AO95602 1720 aaPredicted RBP7.22□□□□□ -1.25
SSPN-206ENST00000539019 KIF1BO60333 1816 aa7.22□□□□□ -1.25
SSPN-206ENST00000539019 SGSM2O43147 1006 aa7.21□□□□□ -1.25
SSPN-206ENST00000539019 FPR2P25090 351 aa7.21□□□□□ -1.25
SSPN-206ENST00000539019 RPL11P62913 178 aaKnown RBP7.21□□□□□ -1.25
SSPN-206ENST00000539019 RBM10P98175 930 aaKnown RBP7.21□□□□□ -1.25
SSPN-206ENST00000539019 CEP68Q76N32 757 aa7.21□□□□□ -1.25
SSPN-206ENST00000539019 DCP2Q8IU60 420 aaKnown RBP7.21□□□□□ -1.25
SSPN-206ENST00000539019 CCDC140Q96MF4 163 aa7.21□□□□□ -1.25
SSPN-206ENST00000539019 ST7Q9NRC1 585 aa7.21□□□□□ -1.25
SSPN-206ENST00000539019 PLEKHH1Q9ULM0 1364 aa7.21□□□□□ -1.25
SSPN-206ENST00000539019 YTHDC2Q9H6S0 1430 aaKnown RBP7.21□□□□□ -1.26
SSPN-206ENST00000539019 SH3D21A4FU49 640 aa7.2□□□□□ -1.26
SSPN-206ENST00000539019 MEFVO15553 781 aaPredicted RBP7.2□□□□□ -1.26
SSPN-206ENST00000539019 CPP00450 1065 aa7.2□□□□□ -1.26
SSPN-206ENST00000539019 BCL6P41182 706 aa7.2□□□□□ -1.26
SSPN-206ENST00000539019 BUD31P41223 144 aaPredicted RBP7.2□□□□□ -1.26
SSPN-206ENST00000539019 KCNJ6P48051 423 aa7.2□□□□□ -1.26
SSPN-206ENST00000539019 DLX2Q07687 328 aaPredicted RBP7.2□□□□□ -1.26
SSPN-206ENST00000539019 LIPIQ6XZB0 460 aa7.2□□□□□ -1.26
SSPN-206ENST00000539019 SLC43A3Q8NBI5 491 aa7.2□□□□□ -1.26
SSPN-206ENST00000539019 HNRNPLLQ8WVV9 542 aaKnown RBP7.2□□□□□ -1.26
SSPN-206ENST00000539019 NKTRP30414 1462 aaKnown RBP7.2□□□□□ -1.26
SSPN-206ENST00000539019 RALGAPBQ86X10 1494 aa7.2□□□□□ -1.26
SSPN-206ENST00000539019 TMEM94Q12767 1356 aa7.2□□□□□ -1.26
SSPN-206ENST00000539019 CAPNS1P04632 268 aa7.2□□□□□ -1.26
SSPN-206ENST00000539019 GFRA1P56159 465 aa7.2□□□□□ -1.26
SSPN-206ENST00000539019 DENND5AQ6IQ26 1287 aa7.2□□□□□ -1.26
SSPN-206ENST00000539019 EEPD1Q7L9B9 569 aa7.2□□□□□ -1.26
SSPN-206ENST00000539019 CELF2-AS1Q8N7Q2 184 aa7.2□□□□□ -1.26
SSPN-206ENST00000539019 TMEM145Q8NBT3 493 aa7.2□□□□□ -1.26
SSPN-206ENST00000539019 RCBTB1Q8NDN9 531 aa7.2□□□□□ -1.26
SSPN-206ENST00000539019 DDX11Q96FC9 970 aa7.2□□□□□ -1.26
SSPN-206ENST00000539019 GMLQ99445 158 aa7.2□□□□□ -1.26
SSPN-206ENST00000539019 AP5M1Q9H0R1 490 aa7.2□□□□□ -1.26
SSPN-206ENST00000539019 ADAM7Q9H2U9 754 aa7.2□□□□□ -1.26
SSPN-206ENST00000539019 R3HCC1Q9Y3T6 440 aaKnown RBP7.2□□□□□ -1.26
SSPN-206ENST00000539019 FAM135BQ49AJ0 1406 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms