RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 CTSHP09668 335 aa14.39□□□□□ -0.11
VAMP1-206ENST00000538970 ADAM17P78536 824 aa14.39□□□□□ -0.11
VAMP1-206ENST00000538970 SP4Q02446 784 aa14.39□□□□□ -0.11
VAMP1-206ENST00000538970 NECTIN1Q15223 517 aa14.39□□□□□ -0.11
VAMP1-206ENST00000538970 UTP14CQ5TAP6 766 aaKnown RBP14.39□□□□□ -0.11
VAMP1-206ENST00000538970 TMTC3Q6ZXV5 915 aa14.39□□□□□ -0.11
VAMP1-206ENST00000538970 RAB11FIP4Q86YS3 637 aa14.39□□□□□ -0.11
VAMP1-206ENST00000538970 LMBR1Q8WVP7 490 aa14.39□□□□□ -0.11
VAMP1-206ENST00000538970 GPRASP2Q96D09 838 aa14.39□□□□□ -0.11
VAMP1-206ENST00000538970 TGS1Q96RS0 853 aaKnown RBP14.39□□□□□ -0.11
VAMP1-206ENST00000538970 PSTPIP2Q9H939 334 aa14.39□□□□□ -0.11
VAMP1-206ENST00000538970 SUGCTQ9HAC7 445 aa14.39□□□□□ -0.11
VAMP1-206ENST00000538970 ANO2Q9NQ90 1003 aa14.39□□□□□ -0.11
VAMP1-206ENST00000538970 LMCD1Q9NZU5 365 aa14.39□□□□□ -0.11
VAMP1-206ENST00000538970 MTUS1Q9ULD2 1270 aa14.39□□□□□ -0.11
VAMP1-206ENST00000538970 SLC12A7Q9Y666 1083 aa14.39□□□□□ -0.11
VAMP1-206ENST00000538970 hCG_1642624A0A1W2PR95 340 aa14.38□□□□□ -0.11
VAMP1-206ENST00000538970 PI4K2BG5E9Z4 385 aa14.38□□□□□ -0.11
VAMP1-206ENST00000538970 ATP9AO75110 1047 aa14.38□□□□□ -0.11
VAMP1-206ENST00000538970 GNAT1P11488 350 aa14.38□□□□□ -0.11
VAMP1-206ENST00000538970 KCNA2P16389 499 aa14.38□□□□□ -0.11
VAMP1-206ENST00000538970 ITGB5P18084 799 aa14.38□□□□□ -0.11
VAMP1-206ENST00000538970 HTRA4P83105 476 aaPredicted RBP14.38□□□□□ -0.11
VAMP1-206ENST00000538970 SGMS1Q86VZ5 419 aa14.38□□□□□ -0.11
VAMP1-206ENST00000538970 MYOCDQ8IZQ8 938 aa14.38□□□□□ -0.11
VAMP1-206ENST00000538970 GIMAP8Q8ND71 665 aaPredicted RBP14.38□□□□□ -0.11
VAMP1-206ENST00000538970 SP7Q8TDD2 431 aaPredicted RBP14.38□□□□□ -0.11
VAMP1-206ENST00000538970 SEPT8Q92599 483 aa14.38□□□□□ -0.11
VAMP1-206ENST00000538970 CDHR1Q96JP9 859 aa14.38□□□□□ -0.11
VAMP1-206ENST00000538970 LRRC2Q9BYS8 371 aa14.38□□□□□ -0.11
VAMP1-206ENST00000538970 OSBPL7Q9BZF2 842 aa14.38□□□□□ -0.11
VAMP1-206ENST00000538970 INSL6Q9Y581 213 aa14.38□□□□□ -0.11
VAMP1-206ENST00000538970 COL4A6Q14031 1691 aa14.38□□□□□ -0.11
VAMP1-206ENST00000538970 DOCK5Q9H7D0 1870 aa14.38□□□□□ -0.11
VAMP1-206ENST00000538970 SIP14410 1827 aa14.37□□□□□ -0.11
VAMP1-206ENST00000538970 TCF7P36402 384 aaPredicted RBP14.37□□□□□ -0.11
VAMP1-206ENST00000538970 ARHGAP4P98171 946 aa14.37□□□□□ -0.11
VAMP1-206ENST00000538970 UBE2SQ16763 222 aa14.37□□□□□ -0.11
VAMP1-206ENST00000538970 MICU3Q86XE3 530 aa14.37□□□□□ -0.11
VAMP1-206ENST00000538970 FANCBQ8NB91 859 aa14.37□□□□□ -0.11
VAMP1-206ENST00000538970 HLA-CQ95604 372 aa14.37□□□□□ -0.11
VAMP1-206ENST00000538970 UBIAD1Q9Y5Z9 338 aa14.37□□□□□ -0.11
VAMP1-206ENST00000538970 WDFY4Q6ZS81 3184 aa14.37□□□□□ -0.11
VAMP1-206ENST00000538970 MICAL3Q7RTP6 2002 aa14.37□□□□□ -0.11
VAMP1-206ENST00000538970 NRCAMQ92823 1304 aa14.37□□□□□ -0.11
VAMP1-206ENST00000538970 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.36□□□□□ -0.11
VAMP1-206ENST00000538970 SPDYE3A6NKU9 549 aa14.36□□□□□ -0.11
VAMP1-206ENST00000538970 MTMR1Q13613 665 aa14.36□□□□□ -0.11
VAMP1-206ENST00000538970 FAM26DQ5JW98 314 aa14.36□□□□□ -0.11
VAMP1-206ENST00000538970 HEATR3Q7Z4Q2 680 aa14.36□□□□□ -0.11
VAMP1-206ENST00000538970 CCDC82Q8N4S0 544 aa14.36□□□□□ -0.11
VAMP1-206ENST00000538970 C17orf80Q9BSJ5 609 aa14.36□□□□□ -0.11
VAMP1-206ENST00000538970 CNTNAP5Q8WYK1 1306 aa14.36□□□□□ -0.11
VAMP1-206ENST00000538970 GSTTP1A0A1W2PQM5 241 aa14.35□□□□□ -0.11
VAMP1-206ENST00000538970 NHLH1Q02575 133 aa14.35□□□□□ -0.11
VAMP1-206ENST00000538970 BMP2KLQ5H9B9 411 aa14.35□□□□□ -0.11
VAMP1-206ENST00000538970 RUFY4Q6ZNE9 571 aa14.35□□□□□ -0.11
VAMP1-206ENST00000538970 RPAINQ86UA6 219 aa14.35□□□□□ -0.11
VAMP1-206ENST00000538970 FBXO22Q8NEZ5 403 aa14.35□□□□□ -0.11
VAMP1-206ENST00000538970 SEPT1Q8WYJ6 367 aa14.35□□□□□ -0.11
VAMP1-206ENST00000538970 APBB2Q92870 758 aa14.35□□□□□ -0.11
VAMP1-206ENST00000538970 TOP1MTQ969P6 601 aa14.35□□□□□ -0.11
VAMP1-206ENST00000538970 IFIH1Q9BYX4 1025 aaKnown RBP14.35□□□□□ -0.11
VAMP1-206ENST00000538970 JADE2Q9NQC1 790 aa14.35□□□□□ -0.11
VAMP1-206ENST00000538970 PKD2L1Q9P0L9 805 aa14.35□□□□□ -0.11
VAMP1-206ENST00000538970 PCDHA6Q9UN73 950 aa14.35□□□□□ -0.11
VAMP1-206ENST00000538970 PCDHA8Q9Y5H6 950 aa14.35□□□□□ -0.11
VAMP1-206ENST00000538970 PRR33A8MZF0 331 aa14.34□□□□□ -0.11
VAMP1-206ENST00000538970 MARK3P27448 753 aa14.34□□□□□ -0.11
VAMP1-206ENST00000538970 MGAT3Q09327 533 aa14.34□□□□□ -0.11
VAMP1-206ENST00000538970 PPFIA1Q13136 1202 aa14.34□□□□□ -0.11
VAMP1-206ENST00000538970 RNF20Q5VTR2 975 aa14.34□□□□□ -0.11
VAMP1-206ENST00000538970 WWC2Q6AWC2 1192 aa14.34□□□□□ -0.11
VAMP1-206ENST00000538970 TYW1BQ6NUM6 668 aa14.34□□□□□ -0.11
VAMP1-206ENST00000538970 TAF2Q6P1X5 1199 aa14.34□□□□□ -0.11
VAMP1-206ENST00000538970 APOA5Q6Q788 366 aa14.34□□□□□ -0.11
VAMP1-206ENST00000538970 SKAP1Q86WV1 359 aa14.34□□□□□ -0.11
VAMP1-206ENST00000538970 YME1L1Q96TA2 773 aa14.34□□□□□ -0.11
VAMP1-206ENST00000538970 ERAP1Q9NZ08 941 aa14.34□□□□□ -0.11
VAMP1-206ENST00000538970 MBLAC1A4D2B0 266 aaPredicted RBP14.33□□□□□ -0.12
VAMP1-206ENST00000538970 MAFGO15525 162 aa14.33□□□□□ -0.12
VAMP1-206ENST00000538970 CHRNA1P02708 482 aa14.33□□□□□ -0.12
VAMP1-206ENST00000538970 EXOSC10Q01780 885 aaKnown RBP14.33□□□□□ -0.12
VAMP1-206ENST00000538970 FUT2Q10981 343 aa14.33□□□□□ -0.12
VAMP1-206ENST00000538970 GRIK4Q16099 956 aa14.33□□□□□ -0.12
VAMP1-206ENST00000538970 PPP1R18Q6NYC8 613 aa14.33□□□□□ -0.12
VAMP1-206ENST00000538970 SYNE3Q6ZMZ3 975 aa14.33□□□□□ -0.12
VAMP1-206ENST00000538970 GLG1Q92896 1179 aa14.33□□□□□ -0.12
VAMP1-206ENST00000538970 TCEANC2Q96MN5 208 aa14.33□□□□□ -0.12
VAMP1-206ENST00000538970 SAMD11Q96NU1 681 aa14.33□□□□□ -0.12
VAMP1-206ENST00000538970 NEK1Q96PY6 1258 aa14.33□□□□□ -0.12
VAMP1-206ENST00000538970 UIMC1Q96RL1 719 aa14.33□□□□□ -0.12
VAMP1-206ENST00000538970 EHMT1Q9H9B1 1298 aa14.33□□□□□ -0.12
VAMP1-206ENST00000538970 JPH1Q9HDC5 661 aaPredicted RBP14.33□□□□□ -0.12
VAMP1-206ENST00000538970 RBM28Q9NW13 759 aaKnown RBP14.33□□□□□ -0.12
VAMP1-206ENST00000538970 TUBE1Q9UJT0 475 aa14.33□□□□□ -0.12
VAMP1-206ENST00000538970 UPP2O95045 317 aa14.32□□□□□ -0.12
VAMP1-206ENST00000538970 GHRP10912 638 aa14.32□□□□□ -0.12
VAMP1-206ENST00000538970 NAPAP54920 295 aa14.32□□□□□ -0.12
VAMP1-206ENST00000538970 EPC2Q52LR7 807 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms