RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 DYDC2Q96IM9 177 aa16.44■□□□□ 0.22
ATL3-203ENST00000538786 ZFP91Q96JP5 570 aaPredicted RBP16.44■□□□□ 0.22
ATL3-203ENST00000538786 REEP2Q9BRK0 252 aa16.44■□□□□ 0.22
ATL3-203ENST00000538786 NOC4LQ9BVI4 516 aaKnown RBP16.44■□□□□ 0.22
ATL3-203ENST00000538786 ADARB2Q9NS39 739 aaKnown RBP16.44■□□□□ 0.22
ATL3-203ENST00000538786 ADAMTS5Q9UNA0 930 aa16.44■□□□□ 0.22
ATL3-203ENST00000538786 PPP2R2CQ9Y2T4 447 aa16.44■□□□□ 0.22
ATL3-203ENST00000538786 UBIAD1Q9Y5Z9 338 aa16.44■□□□□ 0.22
ATL3-203ENST00000538786 GTF2F1P35269 517 aaKnown RBP eCLIP16.43■□□□□ 0.22
ATL3-203ENST00000538786 RPS6P62753 249 aaKnown RBP16.43■□□□□ 0.22
ATL3-203ENST00000538786 EPHA7Q15375 998 aa16.43■□□□□ 0.22
ATL3-203ENST00000538786 SLC30A10Q6XR72 485 aa16.43■□□□□ 0.22
ATL3-203ENST00000538786 TPH2Q8IWU9 490 aa16.43■□□□□ 0.22
ATL3-203ENST00000538786 IL31RAQ8NI17 732 aa16.43■□□□□ 0.22
ATL3-203ENST00000538786 UNC45AQ9H3U1 944 aa16.43■□□□□ 0.22
ATL3-203ENST00000538786 KCNH7Q9NS40 1196 aa16.43■□□□□ 0.22
ATL3-203ENST00000538786 ABHD10Q9NUJ1 306 aa16.43■□□□□ 0.22
ATL3-203ENST00000538786 TBC1D7Q9P0N9 293 aa16.43■□□□□ 0.22
ATL3-203ENST00000538786 DSG3P32926 999 aa16.43■□□□□ 0.22
ATL3-203ENST00000538786 TBC1D8BQ0IIM8 1120 aa16.43■□□□□ 0.22
ATL3-203ENST00000538786 COG2Q14746 738 aa16.43■□□□□ 0.22
ATL3-203ENST00000538786 RNF207Q6ZRF8 634 aa16.43■□□□□ 0.22
ATL3-203ENST00000538786 REXO1L1PQ8IX06 675 aa16.43■□□□□ 0.22
ATL3-203ENST00000538786 REPS2Q8NFH8 660 aa16.43■□□□□ 0.22
ATL3-203ENST00000538786 SCFD1Q8WVM8 642 aa16.43■□□□□ 0.22
ATL3-203ENST00000538786 WNK4Q96J92 1243 aa16.43■□□□□ 0.22
ATL3-203ENST00000538786 FGFBP2Q9BYJ0 223 aa16.43■□□□□ 0.22
ATL3-203ENST00000538786 ZHX3Q9H4I2 956 aa16.43■□□□□ 0.22
ATL3-203ENST00000538786 TMOD4Q9NZQ9 345 aa16.43■□□□□ 0.22
ATL3-203ENST00000538786 AFG3L2Q9Y4W6 797 aa16.43■□□□□ 0.22
ATL3-203ENST00000538786 GOLGA6L9A6NEM1 432 aa16.42■□□□□ 0.22
ATL3-203ENST00000538786 RIOK3O14730 519 aaKnown RBP16.42■□□□□ 0.22
ATL3-203ENST00000538786 USP2O75604 605 aaPredicted RBP16.42■□□□□ 0.22
ATL3-203ENST00000538786 FKBP3Q00688 224 aaKnown RBP16.42■□□□□ 0.22
ATL3-203ENST00000538786 TKFCQ3LXA3 575 aa16.42■□□□□ 0.22
ATL3-203ENST00000538786 TOGARAM2Q6ZUX3 1019 aa16.42■□□□□ 0.22
ATL3-203ENST00000538786 RETREG2Q8NC44 543 aa16.42■□□□□ 0.22
ATL3-203ENST00000538786 NEK9Q8TD19 979 aa16.42■□□□□ 0.22
ATL3-203ENST00000538786 ZNF592Q92610 1267 aa16.42■□□□□ 0.22
ATL3-203ENST00000538786 TAAR1Q96RJ0 339 aa16.42■□□□□ 0.22
ATL3-203ENST00000538786 JADE2Q9NQC1 790 aa16.42■□□□□ 0.22
ATL3-203ENST00000538786 RNF146Q9NTX7 359 aa16.42■□□□□ 0.22
ATL3-203ENST00000538786 RNF181Q9P0P0 153 aa16.42■□□□□ 0.22
ATL3-203ENST00000538786 SOWAHDA6NJG2 315 aa16.41■□□□□ 0.22
ATL3-203ENST00000538786 RNF225M0QZC1 329 aaPredicted RBP16.41■□□□□ 0.22
ATL3-203ENST00000538786 ATP2A1O14983 1001 aa16.41■□□□□ 0.22
ATL3-203ENST00000538786 KRT9P35527 623 aa16.41■□□□□ 0.22
ATL3-203ENST00000538786 MRPS9P82933 396 aaKnown RBP16.41■□□□□ 0.22
ATL3-203ENST00000538786 PGM5Q15124 567 aa16.41■□□□□ 0.22
ATL3-203ENST00000538786 SH3D19Q5HYK7 790 aa16.41■□□□□ 0.22
ATL3-203ENST00000538786 FKBP15Q5T1M5 1219 aa16.41■□□□□ 0.22
ATL3-203ENST00000538786 RINT1Q6NUQ1 792 aa16.41■□□□□ 0.22
ATL3-203ENST00000538786 CATSPERGQ6ZRH7 1159 aa16.41■□□□□ 0.22
ATL3-203ENST00000538786 TMTC1Q8IUR5 882 aa16.41■□□□□ 0.22
ATL3-203ENST00000538786 KIF18AQ8NI77 898 aa16.41■□□□□ 0.22
ATL3-203ENST00000538786 RBM46Q8TBY0 533 aaKnown RBP16.41■□□□□ 0.22
ATL3-203ENST00000538786 PIGOQ8TEQ8 1089 aa16.41■□□□□ 0.22
ATL3-203ENST00000538786 CEP63Q96MT8 703 aa16.41■□□□□ 0.22
ATL3-203ENST00000538786 NACC1Q96RE7 527 aa16.41■□□□□ 0.22
ATL3-203ENST00000538786 ERGIC2Q96RQ1 377 aa16.41■□□□□ 0.22
ATL3-203ENST00000538786 NUP58Q9BVL2 599 aa16.41■□□□□ 0.22
ATL3-203ENST00000538786 RUSC1Q9BVN2 902 aa16.41■□□□□ 0.22
ATL3-203ENST00000538786 KCTD10Q9H3F6 313 aa16.41■□□□□ 0.22
ATL3-203ENST00000538786 AGO4Q9HCK5 861 aaKnown RBP16.41■□□□□ 0.22
ATL3-203ENST00000538786 CAPN11Q9UMQ6 739 aa16.41■□□□□ 0.22
ATL3-203ENST00000538786 RIPK3Q9Y572 518 aa16.41■□□□□ 0.22
ATL3-203ENST00000538786 TBCAO75347 108 aaKnown RBP16.41■□□□□ 0.22
ATL3-203ENST00000538786 MTMR1Q13613 665 aa16.41■□□□□ 0.22
ATL3-203ENST00000538786 MAN2A1Q16706 1144 aa16.41■□□□□ 0.22
ATL3-203ENST00000538786 VWA3BQ502W6 1294 aa16.41■□□□□ 0.22
ATL3-203ENST00000538786 SNRNP48Q6IEG0 339 aaKnown RBP16.41■□□□□ 0.22
ATL3-203ENST00000538786 NSMFQ6X4W1 530 aa16.41■□□□□ 0.22
ATL3-203ENST00000538786 PPP4R3CPQ6ZMV5 832 aa16.41■□□□□ 0.22
ATL3-203ENST00000538786 SFR1Q86XK3 245 aa16.41■□□□□ 0.22
ATL3-203ENST00000538786 DCPSQ96C86 337 aaKnown RBP16.41■□□□□ 0.22
ATL3-203ENST00000538786 RMDN3Q96TC7 470 aa16.41■□□□□ 0.22
ATL3-203ENST00000538786 PDCD2LQ9BRP1 358 aa16.41■□□□□ 0.22
ATL3-203ENST00000538786 PXMP2Q9NR77 195 aa16.41■□□□□ 0.22
ATL3-203ENST00000538786 LUC7L2Q9Y383 392 aaKnown RBP16.41■□□□□ 0.22
ATL3-203ENST00000538786 COL4A3BPQ9Y5P4 624 aa16.41■□□□□ 0.22
ATL3-203ENST00000538786 MYPNQ86TC9 1320 aa16.41■□□□□ 0.22
ATL3-203ENST00000538786 TTC26A0AVF1 554 aa16.4■□□□□ 0.22
ATL3-203ENST00000538786 TRAF5O00463 557 aa16.4■□□□□ 0.22
ATL3-203ENST00000538786 DYNC1I1O14576 645 aa16.4■□□□□ 0.22
ATL3-203ENST00000538786 DHX15O43143 795 aaKnown RBP16.4■□□□□ 0.22
ATL3-203ENST00000538786 GAP43P17677 238 aa16.4■□□□□ 0.22
ATL3-203ENST00000538786 EIF2AK2P19525 551 aaKnown RBP16.4■□□□□ 0.22
ATL3-203ENST00000538786 PRKG1Q13976 671 aa16.4■□□□□ 0.22
ATL3-203ENST00000538786 SYCP1Q15431 976 aa16.4■□□□□ 0.22
ATL3-203ENST00000538786 EDRF1Q3B7T1 1238 aa16.4■□□□□ 0.22
ATL3-203ENST00000538786 XRRA1Q6P2D8 792 aa16.4■□□□□ 0.22
ATL3-203ENST00000538786 RAD9BQ6WBX8 426 aa16.4■□□□□ 0.22
ATL3-203ENST00000538786 EPM2AIP1Q7L775 607 aaPredicted RBP16.4■□□□□ 0.22
ATL3-203ENST00000538786 NELFCDQ8IXH7 590 aa16.4■□□□□ 0.22
ATL3-203ENST00000538786 IQCDQ96DY2 449 aa16.4■□□□□ 0.22
ATL3-203ENST00000538786 SYT17Q9BSW7 474 aa16.4■□□□□ 0.22
ATL3-203ENST00000538786 NDST4Q9H3R1 872 aa16.4■□□□□ 0.22
ATL3-203ENST00000538786 KCND2Q9NZV8 630 aa16.4■□□□□ 0.22
ATL3-203ENST00000538786 ZNF214Q9UL59 606 aaPredicted RBP16.4■□□□□ 0.22
ATL3-203ENST00000538786 GNA14O95837 355 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms