RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 FAM129AQ9BZQ8 928 aa20.35■□□□□ 0.85
SFSWAP-207ENST00000538548 BATF3Q9NR55 127 aa20.35■□□□□ 0.85
SFSWAP-207ENST00000538548 CASZ1Q86V15 1759 aa20.35■□□□□ 0.85
SFSWAP-207ENST00000538548 CCDC188H7C350 402 aa20.35■□□□□ 0.85
SFSWAP-207ENST00000538548 PGRMC1O00264 195 aaKnown RBP20.35■□□□□ 0.85
SFSWAP-207ENST00000538548 CEP104O60308 925 aa20.35■□□□□ 0.85
SFSWAP-207ENST00000538548 BUB1BO60566 1050 aaPredicted RBP20.35■□□□□ 0.85
SFSWAP-207ENST00000538548 HOXA7P31268 230 aaPredicted RBP20.35■□□□□ 0.85
SFSWAP-207ENST00000538548 FLT3P36888 993 aa20.35■□□□□ 0.85
SFSWAP-207ENST00000538548 IRX1P78414 480 aaPredicted RBP20.35■□□□□ 0.85
SFSWAP-207ENST00000538548 ACCSLQ4AC99 568 aa20.35■□□□□ 0.85
SFSWAP-207ENST00000538548 TLCD1Q96CP7 247 aa20.35■□□□□ 0.85
SFSWAP-207ENST00000538548 TBC1D31Q96DN5 1066 aa20.35■□□□□ 0.85
SFSWAP-207ENST00000538548 TSG101Q99816 390 aa20.35■□□□□ 0.85
SFSWAP-207ENST00000538548 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.35■□□□□ 0.85
SFSWAP-207ENST00000538548 PACSIN1Q9BY11 444 aa20.35■□□□□ 0.85
SFSWAP-207ENST00000538548 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.35■□□□□ 0.852e-6■■□□□ 12.6
SFSWAP-207ENST00000538548 SLC12A4Q9UP95 1085 aa20.35■□□□□ 0.85
SFSWAP-207ENST00000538548 CACNA1SQ13698 1873 aa20.35■□□□□ 0.85
SFSWAP-207ENST00000538548 TMED8Q6PL24 325 aaPredicted RBP20.34■□□□□ 0.85
SFSWAP-207ENST00000538548 PROM2Q8N271 834 aa20.34■□□□□ 0.85
SFSWAP-207ENST00000538548 MMTAG2Q9BU76 263 aaKnown RBP20.34■□□□□ 0.85
SFSWAP-207ENST00000538548 ADAMTS1Q9UHI8 967 aa20.34■□□□□ 0.85
SFSWAP-207ENST00000538548 F8VZ95 297 aa20.34■□□□□ 0.85
SFSWAP-207ENST00000538548 EIF3BP55884 814 aaKnown RBP20.34■□□□□ 0.85
SFSWAP-207ENST00000538548 POLR2FP61218 127 aaKnown RBP20.34■□□□□ 0.85
SFSWAP-207ENST00000538548 CCHCR1Q8TD31 782 aa20.34■□□□□ 0.85
SFSWAP-207ENST00000538548 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.34■□□□□ 0.853e-14■■□□□ 12.4
SFSWAP-207ENST00000538548 RIC8AQ9NPQ8 531 aa20.34■□□□□ 0.85
SFSWAP-207ENST00000538548 CTNND1O60716 968 aaKnown RBP20.33■□□□□ 0.85
SFSWAP-207ENST00000538548 ITIH4Q14624 930 aa20.33■□□□□ 0.85
SFSWAP-207ENST00000538548 ZKSCAN8Q15776 578 aaPredicted RBP20.33■□□□□ 0.85
SFSWAP-207ENST00000538548 CEP120Q8N960 986 aa20.33■□□□□ 0.85
SFSWAP-207ENST00000538548 CCDC63Q8NA47 563 aa20.33■□□□□ 0.85
SFSWAP-207ENST00000538548 SEC14L1Q92503 715 aa20.33■□□□□ 0.85
SFSWAP-207ENST00000538548 DDX47Q9H0S4 455 aaKnown RBP20.33■□□□□ 0.85
SFSWAP-207ENST00000538548 MYMKA6NI61 221 aa20.33■□□□□ 0.84
SFSWAP-207ENST00000538548 DAPK3O43293 454 aa20.33■□□□□ 0.84
SFSWAP-207ENST00000538548 KLHL30Q0D2K2 578 aa20.33■□□□□ 0.84
SFSWAP-207ENST00000538548 IFI16Q16666 785 aaKnown RBP20.33■□□□□ 0.84
SFSWAP-207ENST00000538548 ZNF317Q96PQ6 595 aaPredicted RBP20.33■□□□□ 0.84
SFSWAP-207ENST00000538548 LSM14BQ9BX40 385 aaKnown RBP20.33■□□□□ 0.84
SFSWAP-207ENST00000538548 AP1M1Q9BXS5 423 aa20.33■□□□□ 0.84
SFSWAP-207ENST00000538548 SLITRK6Q9H5Y7 841 aa20.33■□□□□ 0.84
SFSWAP-207ENST00000538548 SLC24A3Q9HC58 644 aa20.33■□□□□ 0.84
SFSWAP-207ENST00000538548 BARHL2Q9NY43 387 aa20.33■□□□□ 0.84
SFSWAP-207ENST00000538548 AIPL1Q9NZN9 384 aa20.33■□□□□ 0.84
SFSWAP-207ENST00000538548 COL4A3BPQ9Y5P4 624 aa20.33■□□□□ 0.84
SFSWAP-207ENST00000538548 MYH4Q9Y623 1939 aa20.33■□□□□ 0.84
SFSWAP-207ENST00000538548 NUP98P52948 1817 aa20.32■□□□□ 0.84
SFSWAP-207ENST00000538548 TSPY2A6NKD2 308 aa20.32■□□□□ 0.84
SFSWAP-207ENST00000538548 ASAP2O43150 1006 aa20.32■□□□□ 0.84
SFSWAP-207ENST00000538548 TECP42680 631 aa20.32■□□□□ 0.84
SFSWAP-207ENST00000538548 DHX9Q08211 1270 aaKnown RBP20.32■□□□□ 0.84
SFSWAP-207ENST00000538548 SPDYCQ5MJ68 293 aa20.32■□□□□ 0.84
SFSWAP-207ENST00000538548 C10orf76Q5T2E6 689 aa20.32■□□□□ 0.84
SFSWAP-207ENST00000538548 HEATR3Q7Z4Q2 680 aa20.32■□□□□ 0.84
SFSWAP-207ENST00000538548 KIRREL3Q8IZU9 778 aa20.32■□□□□ 0.84
SFSWAP-207ENST00000538548 NSMCE1Q8WV22 266 aa20.32■□□□□ 0.84
SFSWAP-207ENST00000538548 STK17AQ9UEE5 414 aa20.32■□□□□ 0.84
SFSWAP-207ENST00000538548 NOC2LQ9Y3T9 749 aaKnown RBP20.32■□□□□ 0.84
SFSWAP-207ENST00000538548 A0A1B0GUL6 1792 aa20.32■□□□□ 0.84
SFSWAP-207ENST00000538548 CFAP73A6NFT4 308 aa20.32■□□□□ 0.84
SFSWAP-207ENST00000538548 CCNT1O60563 726 aaKnown RBP20.32■□□□□ 0.84
SFSWAP-207ENST00000538548 GNAQP50148 359 aa20.32■□□□□ 0.84
SFSWAP-207ENST00000538548 EVX2Q03828 476 aa20.32■□□□□ 0.84
SFSWAP-207ENST00000538548 RAPGEF1Q13905 1077 aa20.32■□□□□ 0.84
SFSWAP-207ENST00000538548 STAMBPL1Q96FJ0 436 aa20.32■□□□□ 0.84
SFSWAP-207ENST00000538548 C8orf37Q96NL8 207 aa20.32■□□□□ 0.84
SFSWAP-207ENST00000538548 BLOC1S4Q9NUP1 217 aa20.32■□□□□ 0.84
SFSWAP-207ENST00000538548 ZNF804BA4D1E1 1349 aa20.32■□□□□ 0.84
SFSWAP-207ENST00000538548 STXBP3O00186 592 aa20.31■□□□□ 0.84
SFSWAP-207ENST00000538548 MYO1EQ12965 1108 aa20.31■□□□□ 0.84
SFSWAP-207ENST00000538548 LETM2Q2VYF4 491 aa20.31■□□□□ 0.84
SFSWAP-207ENST00000538548 LRRC57Q8N9N7 239 aa20.31■□□□□ 0.84
SFSWAP-207ENST00000538548 CCDC26Q8TAB7 109 aa20.31■□□□□ 0.84
SFSWAP-207ENST00000538548 MDM1Q8TC05 714 aa20.31■□□□□ 0.84
SFSWAP-207ENST00000538548 FAM114A2Q9NRY5 505 aa20.31■□□□□ 0.84
SFSWAP-207ENST00000538548 C15orf41Q9Y2V0 281 aa20.31■□□□□ 0.84
SFSWAP-207ENST00000538548 KRIT1O00522 736 aa20.31■□□□□ 0.84
SFSWAP-207ENST00000538548 TOM1O60784 492 aa20.31■□□□□ 0.84
SFSWAP-207ENST00000538548 SLMAPQ14BN4 828 aa20.31■□□□□ 0.84
SFSWAP-207ENST00000538548 NAIF1Q69YI7 327 aaPredicted RBP20.31■□□□□ 0.84
SFSWAP-207ENST00000538548 HOOK3Q86VS8 718 aa20.31■□□□□ 0.84
SFSWAP-207ENST00000538548 AMACRQ9UHK6 382 aa20.31■□□□□ 0.84
SFSWAP-207ENST00000538548 ZBTB48P10074 688 aaPredicted RBP20.3■□□□□ 0.84
SFSWAP-207ENST00000538548 IGHMBP2P38935 993 aaKnown RBP20.3■□□□□ 0.84
SFSWAP-207ENST00000538548 FKBP3Q00688 224 aaKnown RBP20.3■□□□□ 0.84
SFSWAP-207ENST00000538548 ARID5AQ03989 594 aa20.3■□□□□ 0.84
SFSWAP-207ENST00000538548 DYMQ7RTS9 669 aa20.3■□□□□ 0.84
SFSWAP-207ENST00000538548 KRT25Q7Z3Z0 450 aa20.3■□□□□ 0.84
SFSWAP-207ENST00000538548 PIGWQ7Z7B1 504 aa20.3■□□□□ 0.84
SFSWAP-207ENST00000538548 TCP11Q8WWU5 503 aa20.3■□□□□ 0.84
SFSWAP-207ENST00000538548 LARP4BQ92615 738 aaKnown RBP20.3■□□□□ 0.84
SFSWAP-207ENST00000538548 ERVV-1B6SEH8 477 aa20.3■□□□□ 0.84
SFSWAP-207ENST00000538548 GRIK3Q13003 919 aa20.3■□□□□ 0.84
SFSWAP-207ENST00000538548 PSMD2Q13200 908 aa20.3■□□□□ 0.84
SFSWAP-207ENST00000538548 GRB10Q13322 594 aa20.3■□□□□ 0.84
SFSWAP-207ENST00000538548 GRM4Q14833 912 aa20.3■□□□□ 0.84
SFSWAP-207ENST00000538548 ASIC2Q16515 512 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms